RNA–Protein interactions for RNA: ENST00000553300.5

HNRNPC-205, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-205ENST00000553300 PBX3P40426 434 aa14.53□□□□□ -0.08
HNRNPC-205ENST00000553300 SMC1AQ14683 1233 aaKnown RBP14.53□□□□□ -0.08
HNRNPC-205ENST00000553300 DDX53Q86TM3 631 aaKnown RBP14.53□□□□□ -0.08
HNRNPC-205ENST00000553300 RBM23Q86U06 439 aaKnown RBP14.53□□□□□ -0.08
HNRNPC-205ENST00000553300 FAM178BQ8IXR5 827 aa14.53□□□□□ -0.08
HNRNPC-205ENST00000553300 DEPTORQ8TB45 409 aa14.53□□□□□ -0.08
HNRNPC-205ENST00000553300 CDK5RAP3Q96JB5 506 aa14.53□□□□□ -0.08
HNRNPC-205ENST00000553300 DRC1Q96MC2 740 aa14.53□□□□□ -0.08
HNRNPC-205ENST00000553300 EIF2AQ9BY44 585 aaKnown RBP14.53□□□□□ -0.08
HNRNPC-205ENST00000553300 KCND2Q9NZV8 630 aa14.53□□□□□ -0.08
HNRNPC-205ENST00000553300 CD207Q9UJ71 328 aa14.53□□□□□ -0.08
HNRNPC-205ENST00000553300 VPS37CA5D8V6 355 aaPredicted RBP14.52□□□□□ -0.08
HNRNPC-205ENST00000553300 ARL5CA6NH57 179 aa14.52□□□□□ -0.08
HNRNPC-205ENST00000553300 PP2D1A8MPX8 630 aa14.52□□□□□ -0.08
HNRNPC-205ENST00000553300 NT5C1B-RDH14C9J2C7 533 aa14.52□□□□□ -0.08
HNRNPC-205ENST00000553300 E9PMD0 336 aa14.52□□□□□ -0.08
HNRNPC-205ENST00000553300 N4BP3O15049 544 aa14.52□□□□□ -0.08
HNRNPC-205ENST00000553300 B4GALT5O43286 388 aa14.52□□□□□ -0.08
HNRNPC-205ENST00000553300 NR1I2O75469 434 aa14.52□□□□□ -0.08
HNRNPC-205ENST00000553300 CDC25AP30304 524 aa14.52□□□□□ -0.08
HNRNPC-205ENST00000553300 DLX2Q07687 328 aaPredicted RBP14.52□□□□□ -0.08
HNRNPC-205ENST00000553300 COASYQ13057 564 aa14.52□□□□□ -0.08
HNRNPC-205ENST00000553300 SMAD4Q13485 552 aaKnown RBP14.52□□□□□ -0.08
HNRNPC-205ENST00000553300 PRPF4BQ13523 1007 aaKnown RBP14.52□□□□□ -0.08
HNRNPC-205ENST00000553300 SMAD2Q15796 467 aaKnown RBP14.52□□□□□ -0.08
HNRNPC-205ENST00000553300 DUSP6Q16828 381 aa14.52□□□□□ -0.08
HNRNPC-205ENST00000553300 PLPP4Q5VZY2 271 aa14.52□□□□□ -0.08
HNRNPC-205ENST00000553300 TMEM184AQ6ZMB5 413 aa14.52□□□□□ -0.08
HNRNPC-205ENST00000553300 APBB1IPQ7Z5R6 666 aaPredicted RBP14.52□□□□□ -0.08
HNRNPC-205ENST00000553300 MRPL43Q8N983 215 aaKnown RBP14.52□□□□□ -0.08
HNRNPC-205ENST00000553300 NECAB3Q96P71 396 aaPredicted RBP14.52□□□□□ -0.08
HNRNPC-205ENST00000553300 ADPGKQ9BRR6 497 aa14.52□□□□□ -0.08
HNRNPC-205ENST00000553300 MMTAG2Q9BU76 263 aaKnown RBP14.52□□□□□ -0.08
HNRNPC-205ENST00000553300 FAN1Q9Y2M0 1017 aa14.52□□□□□ -0.08
HNRNPC-205ENST00000553300 IRAK3Q9Y616 596 aa14.52□□□□□ -0.08
HNRNPC-205ENST00000553300 K7ELQ4 463 aaPredicted RBP14.51□□□□□ -0.09
HNRNPC-205ENST00000553300 LINC01565O15544 149 aa14.51□□□□□ -0.09
HNRNPC-205ENST00000553300 TBX10O75333 385 aa14.51□□□□□ -0.09
HNRNPC-205ENST00000553300 POMCP01189 267 aa14.51□□□□□ -0.09
HNRNPC-205ENST00000553300 PRKCBP05771 671 aa14.51□□□□□ -0.09
HNRNPC-205ENST00000553300 IL9P15248 144 aa14.51□□□□□ -0.09
HNRNPC-205ENST00000553300 UBA7P41226 1012 aa14.51□□□□□ -0.09
HNRNPC-205ENST00000553300 TMEM132AQ24JP5 1023 aa14.51□□□□□ -0.09
HNRNPC-205ENST00000553300 RINT1Q6NUQ1 792 aa14.51□□□□□ -0.09
HNRNPC-205ENST00000553300 ZNF280BQ86YH2 543 aa14.51□□□□□ -0.09
HNRNPC-205ENST00000553300 VPS52Q8N1B4 723 aa14.51□□□□□ -0.09
HNRNPC-205ENST00000553300 BSNDQ8WZ55 320 aa14.51□□□□□ -0.09
HNRNPC-205ENST00000553300 MSLNLQ96KJ4 702 aa14.51□□□□□ -0.09
HNRNPC-205ENST00000553300 GAD1Q99259 594 aa14.51□□□□□ -0.09
HNRNPC-205ENST00000553300 CCDC113Q9H0I3 377 aa14.51□□□□□ -0.09
HNRNPC-205ENST00000553300 GBP3Q9H0R5 595 aa14.51□□□□□ -0.09
HNRNPC-205ENST00000553300 RNF39Q9H2S5 420 aa14.51□□□□□ -0.09
HNRNPC-205ENST00000553300 CLEC1BQ9P126 229 aa14.51□□□□□ -0.09
HNRNPC-205ENST00000553300 DNAJB4Q9UDY4 337 aa14.51□□□□□ -0.09
HNRNPC-205ENST00000553300 RBM19Q9Y4C8 960 aaKnown RBP14.51□□□□□ -0.09
HNRNPC-205ENST00000553300 HIDE1A8MVS5 230 aa14.5□□□□□ -0.09
HNRNPC-205ENST00000553300 K7ERI5 159 aa14.5□□□□□ -0.09
HNRNPC-205ENST00000553300 PER2O15055 1255 aa14.5□□□□□ -0.09
HNRNPC-205ENST00000553300 MBTPS2O43462 519 aa14.5□□□□□ -0.09
HNRNPC-205ENST00000553300 DDHD2O94830 711 aa14.5□□□□□ -0.09
HNRNPC-205ENST00000553300 NPTXRO95502 500 aa14.5□□□□□ -0.09
HNRNPC-205ENST00000553300 CXCL14O95715 111 aa14.5□□□□□ -0.09
HNRNPC-205ENST00000553300 CTSAP10619 480 aa14.5□□□□□ -0.09
HNRNPC-205ENST00000553300 PDIA4P13667 645 aaKnown RBP14.5□□□□□ -0.09
HNRNPC-205ENST00000553300 SYT1P21579 422 aa14.5□□□□□ -0.09
HNRNPC-205ENST00000553300 GUCY2CP25092 1073 aa14.5□□□□□ -0.09
HNRNPC-205ENST00000553300 LONP1P36776 959 aaKnown RBP14.5□□□□□ -0.09
HNRNPC-205ENST00000553300 SLC11A1P49279 550 aa14.5□□□□□ -0.09
HNRNPC-205ENST00000553300 DMP1Q13316 513 aaPredicted RBP14.5□□□□□ -0.09
HNRNPC-205ENST00000553300 ZRSR1Q15695 479 aaKnown RBP14.5□□□□□ -0.09
HNRNPC-205ENST00000553300 C1orf186Q6ZWK4 172 aa14.5□□□□□ -0.09
HNRNPC-205ENST00000553300 GJD3Q8N144 294 aa14.5□□□□□ -0.09
HNRNPC-205ENST00000553300 SYT2Q8N9I0 419 aaPredicted RBP14.5□□□□□ -0.09
HNRNPC-205ENST00000553300 TMEM87AQ8NBN3 555 aa14.5□□□□□ -0.09
HNRNPC-205ENST00000553300 CALML4Q96GE6 196 aa14.5□□□□□ -0.09
HNRNPC-205ENST00000553300 POP1Q99575 1024 aaKnown RBP14.5□□□□□ -0.09
HNRNPC-205ENST00000553300 ZBP1Q9H171 429 aa14.5□□□□□ -0.09
HNRNPC-205ENST00000553300 HES2Q9Y543 173 aa14.5□□□□□ -0.09
HNRNPC-205ENST00000553300 PCDHGC5Q9Y5F6 944 aa14.5□□□□□ -0.09
HNRNPC-205ENST00000553300 C2orf71A6NGG8 1288 aa14.49□□□□□ -0.09
HNRNPC-205ENST00000553300 NRP1O14786 923 aa14.49□□□□□ -0.09
HNRNPC-205ENST00000553300 HIP1RO75146 1068 aa14.49□□□□□ -0.09
HNRNPC-205ENST00000553300 GLP2RO95838 553 aa14.49□□□□□ -0.09
HNRNPC-205ENST00000553300 HOXB8P17481 243 aaPredicted RBP14.49□□□□□ -0.09
HNRNPC-205ENST00000553300 MLH1P40692 756 aa14.49□□□□□ -0.09
HNRNPC-205ENST00000553300 NPTX2P47972 431 aa14.49□□□□□ -0.09
HNRNPC-205ENST00000553300 AFF1P51825 1210 aaKnown RBP14.49□□□□□ -0.09
HNRNPC-205ENST00000553300 PEX3P56589 373 aa14.49□□□□□ -0.09
HNRNPC-205ENST00000553300 DSC1Q08554 894 aa14.49□□□□□ -0.09
HNRNPC-205ENST00000553300 KCNC3Q14003 757 aa14.49□□□□□ -0.09
HNRNPC-205ENST00000553300 SF3A1Q15459 793 aaKnown RBP14.49□□□□□ -0.09
HNRNPC-205ENST00000553300 DCAF4L1Q3SXM0 396 aa14.49□□□□□ -0.09
HNRNPC-205ENST00000553300 CABP7Q86V35 215 aa14.49□□□□□ -0.09
HNRNPC-205ENST00000553300 ADHFE1Q8IWW8 467 aa14.49□□□□□ -0.09
HNRNPC-205ENST00000553300 COLGALT2Q8IYK4 626 aa14.49□□□□□ -0.09
HNRNPC-205ENST00000553300 SMRP1Q8NCR6 262 aa14.49□□□□□ -0.09
HNRNPC-205ENST00000553300 SNX21Q969T3 373 aa14.49□□□□□ -0.09
HNRNPC-205ENST00000553300 NTPCRQ9BSD7 190 aaKnown RBP14.49□□□□□ -0.09
HNRNPC-205ENST00000553300 APOL6Q9BWW8 343 aa14.49□□□□□ -0.09
HNRNPC-205ENST00000553300 NXF3Q9H4D5 531 aaKnown RBP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms