RNA–Protein interactions for RNA: ENST00000510599.5

UBE2D3-230, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-230ENST00000510599 PLCH1Q4KWH8 1693 aa5.35□□□□□ -1.55
UBE2D3-230ENST00000510599 COL22A1Q8NFW1 1626 aaPredicted RBP5.35□□□□□ -1.55
UBE2D3-230ENST00000510599 A0A087X1B8 175 aa5.35□□□□□ -1.55
UBE2D3-230ENST00000510599 RNMTO43148 476 aaKnown RBP5.35□□□□□ -1.55
UBE2D3-230ENST00000510599 PRODHO43272 600 aa5.35□□□□□ -1.55
UBE2D3-230ENST00000510599 HMGCRP04035 888 aa5.35□□□□□ -1.55
UBE2D3-230ENST00000510599 GNAI2P04899 355 aa5.35□□□□□ -1.55
UBE2D3-230ENST00000510599 ADH4P08319 380 aa5.35□□□□□ -1.55
UBE2D3-230ENST00000510599 RBM25P49756 843 aaKnown RBP5.35□□□□□ -1.55
UBE2D3-230ENST00000510599 DUSP8Q13202 625 aa5.35□□□□□ -1.55
UBE2D3-230ENST00000510599 TUBA3CQ13748 450 aa5.35□□□□□ -1.55
UBE2D3-230ENST00000510599 BTBD8Q5XKL5 378 aa5.35□□□□□ -1.55
UBE2D3-230ENST00000510599 ZNF530Q6P9A1 599 aaPredicted RBP5.35□□□□□ -1.55
UBE2D3-230ENST00000510599 TUBA3EQ6PEY2 450 aa5.35□□□□□ -1.55
UBE2D3-230ENST00000510599 G2E3Q7L622 706 aa5.35□□□□□ -1.55
UBE2D3-230ENST00000510599 NLGN4XQ8N0W4 816 aa5.35□□□□□ -1.55
UBE2D3-230ENST00000510599 LRRC59Q96AG4 307 aaKnown RBP5.35□□□□□ -1.55
UBE2D3-230ENST00000510599 IPPKQ9H8X2 491 aa5.35□□□□□ -1.55
UBE2D3-230ENST00000510599 AURKAIP1Q9NWT8 199 aaPredicted RBP5.35□□□□□ -1.55
UBE2D3-230ENST00000510599 COL14A1Q05707 1796 aaKnown RBP5.34□□□□□ -1.55
UBE2D3-230ENST00000510599 DNAJA1P31689 397 aaKnown RBP5.34□□□□□ -1.55
UBE2D3-230ENST00000510599 ATP8B2P98198 1209 aa5.34□□□□□ -1.55
UBE2D3-230ENST00000510599 NTRK3Q16288 839 aa5.34□□□□□ -1.55
UBE2D3-230ENST00000510599 ZNF575Q86XF7 245 aa5.34□□□□□ -1.55
UBE2D3-230ENST00000510599 ZNF808Q8N4W9 903 aaPredicted RBP5.34□□□□□ -1.55
UBE2D3-230ENST00000510599 MEIS3Q99687 375 aa5.34□□□□□ -1.55
UBE2D3-230ENST00000510599 C22orf23Q9BZE7 217 aa5.34□□□□□ -1.55
UBE2D3-230ENST00000510599 ZDHHC5Q9C0B5 715 aa5.34□□□□□ -1.55
UBE2D3-230ENST00000510599 ZNF408Q9H9D4 720 aa5.34□□□□□ -1.55
UBE2D3-230ENST00000510599 RIC8BQ9NVN3 520 aa5.34□□□□□ -1.55
UBE2D3-230ENST00000510599 HDAC5Q9UQL6 1122 aa5.34□□□□□ -1.55
UBE2D3-230ENST00000510599 GLI3P10071 1580 aa5.33□□□□□ -1.56
UBE2D3-230ENST00000510599 MEGF6O75095 1541 aa5.33□□□□□ -1.56
UBE2D3-230ENST00000510599 MATN2O00339 956 aa5.33□□□□□ -1.56
UBE2D3-230ENST00000510599 PLSCR1O15162 318 aa5.33□□□□□ -1.56
UBE2D3-230ENST00000510599 HSP90AB1P08238 724 aaKnown RBP5.33□□□□□ -1.56
UBE2D3-230ENST00000510599 PABPC1P11940 636 aaKnown RBP5.33□□□□□ -1.56
UBE2D3-230ENST00000510599 PHKG2P15735 406 aa5.33□□□□□ -1.56
UBE2D3-230ENST00000510599 PTPN1P18031 435 aaKnown RBP5.33□□□□□ -1.56
UBE2D3-230ENST00000510599 MAKP20794 623 aa5.33□□□□□ -1.56
UBE2D3-230ENST00000510599 HIBADHP31937 336 aaKnown RBP5.33□□□□□ -1.56
UBE2D3-230ENST00000510599 GJA4P35212 333 aa5.33□□□□□ -1.56
UBE2D3-230ENST00000510599 MSX2P35548 267 aaPredicted RBP5.33□□□□□ -1.56
UBE2D3-230ENST00000510599 KCNQ1P51787 676 aa5.33□□□□□ -1.56
UBE2D3-230ENST00000510599 HHEXQ03014 270 aa5.33□□□□□ -1.56
UBE2D3-230ENST00000510599 IFRD2Q12894 506 aaPredicted RBP5.33□□□□□ -1.56
UBE2D3-230ENST00000510599 NOLC1Q14978 699 aaKnown RBP eCLIP5.33□□□□□ -1.56
UBE2D3-230ENST00000510599 TTC22Q5TAA0 569 aa5.33□□□□□ -1.56
UBE2D3-230ENST00000510599 SLC4A10Q6U841 1118 aa5.33□□□□□ -1.56
UBE2D3-230ENST00000510599 NSMFQ6X4W1 530 aa5.33□□□□□ -1.56
UBE2D3-230ENST00000510599 USP30Q70CQ3 517 aa5.33□□□□□ -1.56
UBE2D3-230ENST00000510599 CXXC5Q7LFL8 322 aaKnown RBP5.33□□□□□ -1.56
UBE2D3-230ENST00000510599 ZNF483Q8TF39 744 aaPredicted RBP5.33□□□□□ -1.56
UBE2D3-230ENST00000510599 RAPGEF4Q8WZA2 1011 aa5.33□□□□□ -1.56
UBE2D3-230ENST00000510599 ARHGEF4Q9NR80 690 aa5.33□□□□□ -1.56
UBE2D3-230ENST00000510599 TLR9Q9NR96 1032 aa5.33□□□□□ -1.56
UBE2D3-230ENST00000510599 KIAA1522Q9P206 1035 aaPredicted RBP5.33□□□□□ -1.56
UBE2D3-230ENST00000510599 DBF4Q9UBU7 674 aaPredicted RBP5.33□□□□□ -1.56
UBE2D3-230ENST00000510599 SRPK3Q9UPE1 567 aa5.33□□□□□ -1.56
UBE2D3-230ENST00000510599 ANKRD36CQ5JPF3 1778 aa5.33□□□□□ -1.56
UBE2D3-230ENST00000510599 TOGARAM1Q9Y4F4 1720 aa5.33□□□□□ -1.56
UBE2D3-230ENST00000510599 KDM6AO15550 1401 aaPredicted RBP5.32□□□□□ -1.56
UBE2D3-230ENST00000510599 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.32□□□□□ -1.56
UBE2D3-230ENST00000510599 PPFIA2O75334 1257 aa5.32□□□□□ -1.56
UBE2D3-230ENST00000510599 CDC45O75419 566 aa5.32□□□□□ -1.56
UBE2D3-230ENST00000510599 ALDH1L1O75891 902 aa5.32□□□□□ -1.56
UBE2D3-230ENST00000510599 PTGS1P23219 599 aa5.32□□□□□ -1.56
UBE2D3-230ENST00000510599 ERCC5P28715 1186 aaPredicted RBP5.32□□□□□ -1.56
UBE2D3-230ENST00000510599 HSPA2P54652 639 aa5.32□□□□□ -1.56
UBE2D3-230ENST00000510599 NANOS3P60323 173 aaKnown RBP5.32□□□□□ -1.56
UBE2D3-230ENST00000510599 ZC3H6P61129 1189 aaKnown RBP5.32□□□□□ -1.56
UBE2D3-230ENST00000510599 IL13RA1P78552 427 aa5.32□□□□□ -1.56
UBE2D3-230ENST00000510599 FOXL1Q12952 345 aa5.32□□□□□ -1.56
UBE2D3-230ENST00000510599 DDR2Q16832 855 aa5.32□□□□□ -1.56
UBE2D3-230ENST00000510599 EP400NLQ6ZTU2 488 aa5.32□□□□□ -1.56
UBE2D3-230ENST00000510599 BRINP3Q76B58 766 aa5.32□□□□□ -1.56
UBE2D3-230ENST00000510599 SSH3Q8TE77 659 aa5.32□□□□□ -1.56
UBE2D3-230ENST00000510599 SH3RF2Q8TEC5 729 aa5.32□□□□□ -1.56
UBE2D3-230ENST00000510599 HNRNPLLQ8WVV9 542 aaKnown RBP5.32□□□□□ -1.56
UBE2D3-230ENST00000510599 OSBP2Q969R2 916 aa5.32□□□□□ -1.56
UBE2D3-230ENST00000510599 SNX21Q969T3 373 aa5.32□□□□□ -1.56
UBE2D3-230ENST00000510599 KIAA1683Q9H0B3 1180 aa5.32□□□□□ -1.56
UBE2D3-230ENST00000510599 USP44Q9H0E7 712 aa5.32□□□□□ -1.56
UBE2D3-230ENST00000510599 INCENPQ9NQS7 918 aa5.32□□□□□ -1.56
UBE2D3-230ENST00000510599 ST7Q9NRC1 585 aa5.32□□□□□ -1.56
UBE2D3-230ENST00000510599 HYPKQ9NX55 129 aa5.32□□□□□ -1.56
UBE2D3-230ENST00000510599 MYH3P11055 1940 aa5.32□□□□□ -1.56
UBE2D3-230ENST00000510599 COL5A2P05997 1499 aaPredicted RBP5.32□□□□□ -1.56
UBE2D3-230ENST00000510599 ADCY9O60503 1353 aa5.31□□□□□ -1.56
UBE2D3-230ENST00000510599 ROBO1Q9Y6N7 1651 aa5.31□□□□□ -1.56
UBE2D3-230ENST00000510599 LRP6O75581 1613 aa5.31□□□□□ -1.56
UBE2D3-230ENST00000510599 AHDC1Q5TGY3 1603 aaPredicted RBP5.31□□□□□ -1.56
UBE2D3-230ENST00000510599 AOX1Q06278 1338 aa5.31□□□□□ -1.56
UBE2D3-230ENST00000510599 WDR17Q8IZU2 1322 aa5.31□□□□□ -1.56
UBE2D3-230ENST00000510599 SALL3Q9BXA9 1300 aa5.31□□□□□ -1.56
UBE2D3-230ENST00000510599 TRAV20A0A0B4J274 112 aa5.31□□□□□ -1.56
UBE2D3-230ENST00000510599 TCRBV5S4A2TA0A5A2 114 aa5.31□□□□□ -1.56
UBE2D3-230ENST00000510599 KCNQ3O43525 872 aa5.31□□□□□ -1.56
UBE2D3-230ENST00000510599 RAB11FIP3O75154 756 aa5.31□□□□□ -1.56
UBE2D3-230ENST00000510599 DDX58O95786 925 aaKnown RBP5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms