RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 STBD1O95210 358 aa11.27□□□□□ -0.61
CPNE1-218ENST00000439806 GARTP22102 1010 aa11.27□□□□□ -0.61
CPNE1-218ENST00000439806 GTF2H1P32780 548 aa11.27□□□□□ -0.61
CPNE1-218ENST00000439806 POLGP54098 1239 aaPredicted RBP11.27□□□□□ -0.61
CPNE1-218ENST00000439806 GUCY2DQ02846 1103 aa11.27□□□□□ -0.61
CPNE1-218ENST00000439806 STRN3Q13033 797 aa11.27□□□□□ -0.61
CPNE1-218ENST00000439806 XKR3Q5GH77 459 aa11.27□□□□□ -0.61
CPNE1-218ENST00000439806 ABHD15Q6UXT9 468 aa11.27□□□□□ -0.61
CPNE1-218ENST00000439806 NT5DC3Q86UY8 548 aa11.27□□□□□ -0.61
CPNE1-218ENST00000439806 CCDC60Q8IWA6 550 aaPredicted RBP11.27□□□□□ -0.61
CPNE1-218ENST00000439806 RHOT2Q8IXI1 618 aa11.27□□□□□ -0.61
CPNE1-218ENST00000439806 GPC2Q8N158 579 aa11.27□□□□□ -0.61
CPNE1-218ENST00000439806 ANKRD35Q8N283 1001 aa11.27□□□□□ -0.61
CPNE1-218ENST00000439806 PPM1KQ8N3J5 372 aa11.27□□□□□ -0.61
CPNE1-218ENST00000439806 ZSWIM2Q8NEG5 633 aa11.27□□□□□ -0.61
CPNE1-218ENST00000439806 DNERQ8NFT8 737 aa11.27□□□□□ -0.61
CPNE1-218ENST00000439806 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.27□□□□□ -0.618e-6■■□□□ 11.7
CPNE1-218ENST00000439806 AFAP1L1Q8TED9 768 aa11.27□□□□□ -0.61
CPNE1-218ENST00000439806 SLC20A1Q8WUM9 679 aa11.27□□□□□ -0.61
CPNE1-218ENST00000439806 CAVIN3Q969G5 261 aa11.27□□□□□ -0.61
CPNE1-218ENST00000439806 CCDC127Q96BQ5 260 aa11.27□□□□□ -0.61
CPNE1-218ENST00000439806 ZBTB9Q96C00 473 aa11.27□□□□□ -0.61
CPNE1-218ENST00000439806 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.27□□□□□ -0.615e-13■■■■■ 64.1
CPNE1-218ENST00000439806 ZNF302Q9NR11 478 aa11.27□□□□□ -0.61
CPNE1-218ENST00000439806 GDF3Q9NR23 364 aa11.27□□□□□ -0.61
CPNE1-218ENST00000439806 FBXO40Q9UH90 709 aa11.27□□□□□ -0.61
CPNE1-218ENST00000439806 ADAM21Q9UKJ8 722 aa11.27□□□□□ -0.61
CPNE1-218ENST00000439806 USP20Q9Y2K6 914 aa11.27□□□□□ -0.61
CPNE1-218ENST00000439806 NOC2LQ9Y3T9 749 aaKnown RBP11.27□□□□□ -0.61
CPNE1-218ENST00000439806 PFASO15067 1338 aa11.27□□□□□ -0.61
CPNE1-218ENST00000439806 LRRC37A2A6NM11 1700 aa11.26□□□□□ -0.61
CPNE1-218ENST00000439806 HNRNPDLO14979 420 aaKnown RBP11.26□□□□□ -0.61
CPNE1-218ENST00000439806 RAD51CO43502 376 aa11.26□□□□□ -0.61
CPNE1-218ENST00000439806 BUB1BO60566 1050 aaPredicted RBP11.26□□□□□ -0.61
CPNE1-218ENST00000439806 RNF40O75150 1001 aa11.26□□□□□ -0.61
CPNE1-218ENST00000439806 PHACTR2O75167 634 aa11.26□□□□□ -0.61
CPNE1-218ENST00000439806 RTN2O75298 545 aa11.26□□□□□ -0.61
CPNE1-218ENST00000439806 USP2O75604 605 aaPredicted RBP11.26□□□□□ -0.61
CPNE1-218ENST00000439806 RGS20O76081 388 aa11.26□□□□□ -0.61
CPNE1-218ENST00000439806 ICAM3P32942 547 aa11.26□□□□□ -0.61
CPNE1-218ENST00000439806 LMAN1P49257 510 aa11.26□□□□□ -0.61
CPNE1-218ENST00000439806 LIG4P49917 911 aa11.26□□□□□ -0.61
CPNE1-218ENST00000439806 GYS2P54840 703 aa11.26□□□□□ -0.61
CPNE1-218ENST00000439806 SOX10P56693 466 aa11.26□□□□□ -0.61
CPNE1-218ENST00000439806 PPATQ06203 517 aa11.26□□□□□ -0.61
CPNE1-218ENST00000439806 ENPEPQ07075 957 aa11.26□□□□□ -0.61
CPNE1-218ENST00000439806 CYP24A1Q07973 514 aa11.26□□□□□ -0.61
CPNE1-218ENST00000439806 EMC2Q15006 297 aa11.26□□□□□ -0.61
CPNE1-218ENST00000439806 GADL1Q6ZQY3 521 aa11.26□□□□□ -0.61
CPNE1-218ENST00000439806 SEPT14Q6ZU15 432 aa11.26□□□□□ -0.61
CPNE1-218ENST00000439806 RASGEF1CQ8N431 466 aa11.26□□□□□ -0.61
CPNE1-218ENST00000439806 NLGN2Q8NFZ4 835 aa11.26□□□□□ -0.61
CPNE1-218ENST00000439806 PARD3BQ8TEW8 1205 aa11.26□□□□□ -0.61
CPNE1-218ENST00000439806 SCFD2Q8WU76 684 aa11.26□□□□□ -0.61
CPNE1-218ENST00000439806 IFT81Q8WYA0 676 aa11.26□□□□□ -0.61
CPNE1-218ENST00000439806 ARHGEF26Q96DR7 871 aa11.26□□□□□ -0.61
CPNE1-218ENST00000439806 MFSD14AQ96MC6 490 aa11.26□□□□□ -0.61
CPNE1-218ENST00000439806 SGIP1Q9BQI5 828 aa11.26□□□□□ -0.61
CPNE1-218ENST00000439806 NTPCRQ9BSD7 190 aaKnown RBP11.26□□□□□ -0.61
CPNE1-218ENST00000439806 THAP2Q9H0W7 228 aa11.26□□□□□ -0.61
CPNE1-218ENST00000439806 OSGEPQ9NPF4 335 aa11.26□□□□□ -0.61
CPNE1-218ENST00000439806 XPNPEP1Q9NQW7 623 aa11.26□□□□□ -0.61
CPNE1-218ENST00000439806 TAS2R14Q9NYV8 317 aa11.26□□□□□ -0.61
CPNE1-218ENST00000439806 CTTNBP2NLQ9P2B4 639 aa11.26□□□□□ -0.61
CPNE1-218ENST00000439806 PRDM4Q9UKN5 801 aa11.26□□□□□ -0.61
CPNE1-218ENST00000439806 CSADQ9Y600 493 aa11.26□□□□□ -0.61
CPNE1-218ENST00000439806 SNCAIPQ9Y6H5 919 aa11.26□□□□□ -0.61
CPNE1-218ENST00000439806 TMEM110-MUSTN1A8MSY1 372 aa11.25□□□□□ -0.61
CPNE1-218ENST00000439806 GOLGA8KD6RF30 607 aa11.25□□□□□ -0.61
CPNE1-218ENST00000439806 KRIT1O00522 736 aa11.25□□□□□ -0.61
CPNE1-218ENST00000439806 KIAA0391O15091 583 aaKnown RBP11.25□□□□□ -0.61
CPNE1-218ENST00000439806 CLSTN1O94985 981 aa11.25□□□□□ -0.61
CPNE1-218ENST00000439806 SGPL1O95470 568 aa11.25□□□□□ -0.61
CPNE1-218ENST00000439806 SYF2O95926 243 aaKnown RBP11.25□□□□□ -0.61
CPNE1-218ENST00000439806 FTLP02792 175 aaPredicted RBP11.25□□□□□ -0.61
CPNE1-218ENST00000439806 OATP04181 439 aa11.25□□□□□ -0.61
CPNE1-218ENST00000439806 GLI1P08151 1106 aa11.25□□□□□ -0.61
CPNE1-218ENST00000439806 ADSSP30520 456 aa11.25□□□□□ -0.61
CPNE1-218ENST00000439806 GGCXP38435 758 aa11.25□□□□□ -0.61
CPNE1-218ENST00000439806 PDE6CP51160 858 aa11.25□□□□□ -0.61
CPNE1-218ENST00000439806 ALDH5A1P51649 535 aaPredicted RBP11.25□□□□□ -0.61
CPNE1-218ENST00000439806 GPC3P51654 580 aa11.25□□□□□ -0.61
CPNE1-218ENST00000439806 HIRAP54198 1017 aaPredicted RBP11.25□□□□□ -0.61
CPNE1-218ENST00000439806 HADHBP55084 474 aaKnown RBP11.25□□□□□ -0.61
CPNE1-218ENST00000439806 MCCD1P59942 119 aaPredicted RBP11.25□□□□□ -0.61
CPNE1-218ENST00000439806 GPC5P78333 572 aa11.25□□□□□ -0.61
CPNE1-218ENST00000439806 CLUL1Q15846 466 aa11.25□□□□□ -0.61
CPNE1-218ENST00000439806 BRDTQ58F21 947 aaPredicted RBP11.25□□□□□ -0.61
CPNE1-218ENST00000439806 TAF3Q5VWG9 929 aa11.25□□□□□ -0.61
CPNE1-218ENST00000439806 ALS2CLQ60I27 953 aa11.25□□□□□ -0.61
CPNE1-218ENST00000439806 SLC39A4Q6P5W5 647 aa11.25□□□□□ -0.61
CPNE1-218ENST00000439806 CYFIP1Q7L576 1253 aa11.25□□□□□ -0.61
CPNE1-218ENST00000439806 RIOX2Q8IUF8 465 aa11.25□□□□□ -0.61
CPNE1-218ENST00000439806 FBXL13Q8NEE6 735 aa11.25□□□□□ -0.61
CPNE1-218ENST00000439806 CCDC26Q8TAB7 109 aa11.25□□□□□ -0.61
CPNE1-218ENST00000439806 DEPTORQ8TB45 409 aa11.25□□□□□ -0.61
CPNE1-218ENST00000439806 WHAMMQ8TF30 809 aa11.25□□□□□ -0.61
CPNE1-218ENST00000439806 CASKIN2Q8WXE0 1202 aa11.25□□□□□ -0.61
CPNE1-218ENST00000439806 SHC3Q92529 594 aa11.25□□□□□ -0.61
CPNE1-218ENST00000439806 SEMA4DQ92854 862 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms