RNA–Protein interactions for RNA: ENST00000286307.5

LSM11-201, Transcript of LSM11, U7 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM11, Length 6,584 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11-201ENST00000286307 KPNA2P52292 529 aaKnown RBP20.52■□□□□ 0.88
LSM11-201ENST00000286307 ALKBH5Q6P6C2 394 aaKnown RBP20.52■□□□□ 0.88
LSM11-201ENST00000286307 TTC23LQ6PF05 361 aa20.52■□□□□ 0.88
LSM11-201ENST00000286307 RMDN1Q96DB5 314 aa20.52■□□□□ 0.88
LSM11-201ENST00000286307 COLEC11Q9BWP8 271 aa20.52■□□□□ 0.88
LSM11-201ENST00000286307 ICAM1P05362 532 aa20.52■□□□□ 0.88
LSM11-201ENST00000286307 IGFBP4P22692 258 aa20.52■□□□□ 0.88
LSM11-201ENST00000286307 ZNF746Q6NUN9 644 aaPredicted RBP20.52■□□□□ 0.88
LSM11-201ENST00000286307 MUC3BQ9H195 1237 aa20.52■□□□□ 0.88
LSM11-201ENST00000286307 KIDINS220Q9ULH0 1771 aa20.52■□□□□ 0.88
LSM11-201ENST00000286307 SOWAHDA6NJG2 315 aa20.52■□□□□ 0.88
LSM11-201ENST00000286307 RWDD2BP57060 319 aa20.52■□□□□ 0.88
LSM11-201ENST00000286307 DEFB115Q30KQ5 88 aa20.52■□□□□ 0.88
LSM11-201ENST00000286307 KLC3Q6P597 504 aa20.52■□□□□ 0.88
LSM11-201ENST00000286307 DCP1BQ8IZD4 617 aaKnown RBP20.52■□□□□ 0.88
LSM11-201ENST00000286307 EDEM3Q9BZQ6 932 aa20.52■□□□□ 0.88
LSM11-201ENST00000286307 SYNGAP1Q96PV0 1343 aa20.52■□□□□ 0.87
LSM11-201ENST00000286307 PVALEFA0A1B0GWK0 134 aa20.52■□□□□ 0.87
LSM11-201ENST00000286307 PGRMC1O00264 195 aaKnown RBP20.52■□□□□ 0.87
LSM11-201ENST00000286307 RGS7P49802 495 aa20.52■□□□□ 0.87
LSM11-201ENST00000286307 FOXD4Q12950 439 aaPredicted RBP20.52■□□□□ 0.87
LSM11-201ENST00000286307 SLMAPQ14BN4 828 aa20.52■□□□□ 0.87
LSM11-201ENST00000286307 TMED2Q15363 201 aa20.52■□□□□ 0.87
LSM11-201ENST00000286307 ARHGAP24Q8N264 748 aa20.52■□□□□ 0.87
LSM11-201ENST00000286307 PROM2Q8N271 834 aa20.52■□□□□ 0.87
LSM11-201ENST00000286307 KLC2Q9H0B6 622 aa20.51■□□□□ 0.87
LSM11-201ENST00000286307 MEGF6O75095 1541 aa20.51■□□□□ 0.87
LSM11-201ENST00000286307 FBXW4P57775 412 aa20.51■□□□□ 0.87
LSM11-201ENST00000286307 IL1RL1Q01638 556 aa20.51■□□□□ 0.87
LSM11-201ENST00000286307 HOMER3Q9NSC5 361 aa20.51■□□□□ 0.87
LSM11-201ENST00000286307 YWHAHQ04917 246 aaPredicted RBP20.51■□□□□ 0.87
LSM11-201ENST00000286307 SV2CQ496J9 727 aa20.51■□□□□ 0.87
LSM11-201ENST00000286307 E5RI56 91 aa20.51■□□□□ 0.87
LSM11-201ENST00000286307 STX1BP61266 288 aa20.51■□□□□ 0.87
LSM11-201ENST00000286307 KCNH7Q9NS40 1196 aa20.51■□□□□ 0.87
LSM11-201ENST00000286307 JRKLQ9Y4A0 524 aa20.51■□□□□ 0.87
LSM11-201ENST00000286307 ZC3H11AO75152 810 aaKnown RBP eCLIP20.51■□□□□ 0.87
LSM11-201ENST00000286307 PRR29P0C7W0 189 aa20.51■□□□□ 0.87
LSM11-201ENST00000286307 KDELC2Q7Z4H8 507 aa20.51■□□□□ 0.87
LSM11-201ENST00000286307 SHCBP1Q8NEM2 672 aa20.51■□□□□ 0.87
LSM11-201ENST00000286307 FAM71BQ8TC56 605 aa20.5■□□□□ 0.87
LSM11-201ENST00000286307 SEPT8Q92599 483 aa20.5■□□□□ 0.87
LSM11-201ENST00000286307 TTC36A6NLP5 189 aa20.5■□□□□ 0.87
LSM11-201ENST00000286307 SUPT20HL2P0C7V6 817 aa20.5■□□□□ 0.87
LSM11-201ENST00000286307 TIPINQ9BVW5 301 aa20.5■□□□□ 0.87
LSM11-201ENST00000286307 YIPF2Q9BWQ6 316 aa20.5■□□□□ 0.87
LSM11-201ENST00000286307 AP1M1Q9BXS5 423 aa20.5■□□□□ 0.87
LSM11-201ENST00000286307 VCAM1P19320 739 aa20.5■□□□□ 0.87
LSM11-201ENST00000286307 ANGPTL8Q6UXH0 198 aa20.5■□□□□ 0.87
LSM11-201ENST00000286307 CUL4AQ13619 759 aa20.5■□□□□ 0.87
LSM11-201ENST00000286307 SGMS1Q86VZ5 419 aa20.5■□□□□ 0.87
LSM11-201ENST00000286307 CCHCR1Q8TD31 782 aa20.5■□□□□ 0.87
LSM11-201ENST00000286307 MRFAP1L1Q96HT8 127 aa20.5■□□□□ 0.87
LSM11-201ENST00000286307 PLEKHA5Q9HAU0 1116 aa20.5■□□□□ 0.87
LSM11-201ENST00000286307 HSPBP1Q9NZL4 362 aa20.5■□□□□ 0.87
LSM11-201ENST00000286307 ARL4DP49703 201 aa20.5■□□□□ 0.87
LSM11-201ENST00000286307 CDCA5Q96FF9 252 aa20.5■□□□□ 0.87
LSM11-201ENST00000286307 ZNF512BQ96KM6 892 aaPredicted RBP20.5■□□□□ 0.87
LSM11-201ENST00000286307 DNAJC17Q9NVM6 304 aaKnown RBP20.5■□□□□ 0.87
LSM11-201ENST00000286307 ABI2Q9NYB9 513 aaPredicted RBP20.5■□□□□ 0.87
LSM11-201ENST00000286307 EHD2Q9NZN4 543 aa20.5■□□□□ 0.87
LSM11-201ENST00000286307 PDIA6Q15084 440 aa20.5■□□□□ 0.87
LSM11-201ENST00000286307 TTC19Q6DKK2 380 aaPredicted RBP20.5■□□□□ 0.87
LSM11-201ENST00000286307 PPP4R4Q6NUP7 873 aa20.5■□□□□ 0.87
LSM11-201ENST00000286307 LRRC8CQ8TDW0 803 aa20.5■□□□□ 0.87
LSM11-201ENST00000286307 NAALADL2Q58DX5 795 aa20.49■□□□□ 0.87
LSM11-201ENST00000286307 ZNF579Q8NAF0 562 aaKnown RBP20.49■□□□□ 0.87
LSM11-201ENST00000286307 HMX1Q9NP08 348 aaPredicted RBP20.49■□□□□ 0.87
LSM11-201ENST00000286307 DNAJC6O75061 913 aa20.49■□□□□ 0.87
LSM11-201ENST00000286307 PAPOLAP51003 745 aaKnown RBP20.49■□□□□ 0.87
LSM11-201ENST00000286307 TRIM67Q6ZTA4 783 aa20.49■□□□□ 0.87
LSM11-201ENST00000286307 RHOT2Q8IXI1 618 aa20.49■□□□□ 0.87
LSM11-201ENST00000286307 L3MBTL3Q96JM7 780 aaPredicted RBP20.49■□□□□ 0.87
LSM11-201ENST00000286307 NDFIP2Q9NV92 336 aa20.49■□□□□ 0.87
LSM11-201ENST00000286307 SNX2O60749 519 aa20.49■□□□□ 0.87
LSM11-201ENST00000286307 CYP2C8P10632 490 aa20.49■□□□□ 0.87
LSM11-201ENST00000286307 SKIP12755 728 aa20.49■□□□□ 0.87
LSM11-201ENST00000286307 PLS3P13797 630 aa20.49■□□□□ 0.87
LSM11-201ENST00000286307 DRAP1Q14919 205 aaPredicted RBP20.49■□□□□ 0.87
LSM11-201ENST00000286307 FBXL13Q8NEE6 735 aa20.49■□□□□ 0.87
LSM11-201ENST00000286307 BHMTQ93088 406 aa20.49■□□□□ 0.87
LSM11-201ENST00000286307 EPB41L4AQ9HCS5 686 aaPredicted RBP20.49■□□□□ 0.87
LSM11-201ENST00000286307 C2orf54Q08AI8 447 aa20.49■□□□□ 0.87
LSM11-201ENST00000286307 H3BRJ5 948 aa20.49■□□□□ 0.87
LSM11-201ENST00000286307 ACTR2P61160 394 aa20.49■□□□□ 0.87
LSM11-201ENST00000286307 NUP85Q9BW27 656 aa20.49■□□□□ 0.87
LSM11-201ENST00000286307 DNAJB2P25686 324 aa20.48■□□□□ 0.87
LSM11-201ENST00000286307 MAFGO15525 162 aa20.48■□□□□ 0.87
LSM11-201ENST00000286307 GPC5P78333 572 aa20.48■□□□□ 0.87
LSM11-201ENST00000286307 CDR2LQ86X02 465 aaPredicted RBP20.48■□□□□ 0.87
LSM11-201ENST00000286307 RNF25Q96BH1 459 aaPredicted RBP20.48■□□□□ 0.87
LSM11-201ENST00000286307 TOM1L1O75674 476 aa20.48■□□□□ 0.87
LSM11-201ENST00000286307 ZNF286BP0CG31 522 aa20.48■□□□□ 0.87
LSM11-201ENST00000286307 CEP72Q9P209 647 aa20.48■□□□□ 0.87
LSM11-201ENST00000286307 MMP14P50281 582 aa20.48■□□□□ 0.87
LSM11-201ENST00000286307 TFDP2Q14188 446 aa20.48■□□□□ 0.87
LSM11-201ENST00000286307 IL31Q6EBC2 164 aa20.48■□□□□ 0.87
LSM11-201ENST00000286307 B4GALNT4Q76KP1 1039 aa20.48■□□□□ 0.87
LSM11-201ENST00000286307 TBK1Q9UHD2 729 aa20.48■□□□□ 0.87
LSM11-201ENST00000286307 TUBE1Q9UJT0 475 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms