RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 SGPL1O95470 568 aa18.77■□□□□ 0.6
TRAM1-201ENST00000262213 RARAP10276 462 aa18.77■□□□□ 0.6
TRAM1-201ENST00000262213 COILP38432 576 aaPredicted RBP18.77■□□□□ 0.6
TRAM1-201ENST00000262213 GPC5P78333 572 aa18.77■□□□□ 0.6
TRAM1-201ENST00000262213 ICA1Q05084 483 aa18.77■□□□□ 0.6
TRAM1-201ENST00000262213 NUGGCQ68CJ6 796 aa18.77■□□□□ 0.6
TRAM1-201ENST00000262213 PAXIP1Q6ZW49 1069 aaPredicted RBP18.77■□□□□ 0.6
TRAM1-201ENST00000262213 ECT2Q9H8V3 914 aa18.77■□□□□ 0.6
TRAM1-201ENST00000262213 PKD2L1Q9P0L9 805 aa18.77■□□□□ 0.6
TRAM1-201ENST00000262213 A8MUI8 341 aa18.76■□□□□ 0.59
TRAM1-201ENST00000262213 DDX39AO00148 427 aaKnown RBP18.76■□□□□ 0.59
TRAM1-201ENST00000262213 VPS41P49754 854 aa18.76■□□□□ 0.59
TRAM1-201ENST00000262213 RBM5P52756 815 aaKnown RBP eCLIP18.76■□□□□ 0.59
TRAM1-201ENST00000262213 DRG2P55039 364 aaKnown RBP18.76■□□□□ 0.59
TRAM1-201ENST00000262213 MAP2K1Q02750 393 aaPredicted RBP18.76■□□□□ 0.59
TRAM1-201ENST00000262213 KIF22Q14807 665 aa18.76■□□□□ 0.59
TRAM1-201ENST00000262213 ARHGEF2Q92974 986 aaKnown RBP18.76■□□□□ 0.59
TRAM1-201ENST00000262213 MIEF2Q96C03 454 aa18.76■□□□□ 0.59
TRAM1-201ENST00000262213 PCDHB18PQ96TA0 734 aa18.76■□□□□ 0.59
TRAM1-201ENST00000262213 WDR18Q9BV38 432 aa18.76■□□□□ 0.59
TRAM1-201ENST00000262213 WRAP73Q9P2S5 460 aaPredicted RBP18.76■□□□□ 0.59
TRAM1-201ENST00000262213 TMEM120BA0PK00 339 aa18.76■□□□□ 0.59
TRAM1-201ENST00000262213 MIF4GDA9UHW6 222 aaKnown RBP18.76■□□□□ 0.59
TRAM1-201ENST00000262213 PODXLO00592 558 aa18.76■□□□□ 0.59
TRAM1-201ENST00000262213 BCRP11274 1271 aa18.76■□□□□ 0.59
TRAM1-201ENST00000262213 CTNNA2P26232 953 aa18.76■□□□□ 0.59
TRAM1-201ENST00000262213 CALCOCO2Q13137 446 aa18.76■□□□□ 0.59
TRAM1-201ENST00000262213 TNIP1Q15025 636 aa18.76■□□□□ 0.59
TRAM1-201ENST00000262213 SEPT14Q6ZU15 432 aa18.76■□□□□ 0.59
TRAM1-201ENST00000262213 TAOK1Q7L7X3 1001 aa18.76■□□□□ 0.59
TRAM1-201ENST00000262213 ZSWIM2Q8NEG5 633 aa18.76■□□□□ 0.59
TRAM1-201ENST00000262213 DCAF4Q8WV16 495 aa18.76■□□□□ 0.59
TRAM1-201ENST00000262213 NSMCE1Q8WV22 266 aa18.76■□□□□ 0.59
TRAM1-201ENST00000262213 TAOK3Q9H2K8 898 aa18.76■□□□□ 0.59
TRAM1-201ENST00000262213 CDC42EP4Q9H3Q1 356 aaKnown RBP18.76■□□□□ 0.59
TRAM1-201ENST00000262213 TBK1Q9UHD2 729 aa18.76■□□□□ 0.59
TRAM1-201ENST00000262213 PCYOX1Q9UHG3 505 aa18.76■□□□□ 0.59
TRAM1-201ENST00000262213 PFASO15067 1338 aa18.76■□□□□ 0.59
TRAM1-201ENST00000262213 DDTLA6NHG4 134 aaPredicted RBP18.76■□□□□ 0.59
TRAM1-201ENST00000262213 G3V3G9 751 aa18.76■□□□□ 0.59
TRAM1-201ENST00000262213 IGF2BP3O00425 579 aaKnown RBP eCLIP18.76■□□□□ 0.592e-11■■□□□ 13.5
TRAM1-201ENST00000262213 SNX3O60493 162 aa18.76■□□□□ 0.59
TRAM1-201ENST00000262213 SERPINB2P05120 415 aa18.76■□□□□ 0.59
TRAM1-201ENST00000262213 DCAF8Q5TAQ9 597 aa18.76■□□□□ 0.59
TRAM1-201ENST00000262213 MAGEC3Q8TD91 643 aa18.76■□□□□ 0.59
TRAM1-201ENST00000262213 HSD17B14Q9BPX1 270 aa18.76■□□□□ 0.59
TRAM1-201ENST00000262213 TACO1Q9BSH4 297 aaKnown RBP18.76■□□□□ 0.59
TRAM1-201ENST00000262213 ATP6V0A4Q9HBG4 840 aa18.76■□□□□ 0.59
TRAM1-201ENST00000262213 PARP2Q9UGN5 583 aa18.76■□□□□ 0.59
TRAM1-201ENST00000262213 CNOT7Q9UIV1 285 aaKnown RBP18.76■□□□□ 0.59
TRAM1-201ENST00000262213 PNMA3Q9UL41 463 aa18.76■□□□□ 0.59
TRAM1-201ENST00000262213 TRIM33Q9UPN9 1127 aa18.76■□□□□ 0.59
TRAM1-201ENST00000262213 AFF2P51816 1311 aa18.75■□□□□ 0.59
TRAM1-201ENST00000262213 CLDN3O15551 220 aa18.75■□□□□ 0.59
TRAM1-201ENST00000262213 RARGP13631 454 aa18.75■□□□□ 0.59
TRAM1-201ENST00000262213 CDC25CP30307 473 aa18.75■□□□□ 0.59
TRAM1-201ENST00000262213 SLMAPQ14BN4 828 aa18.75■□□□□ 0.59
TRAM1-201ENST00000262213 RNF207Q6ZRF8 634 aa18.75■□□□□ 0.59
TRAM1-201ENST00000262213 PHLDB2Q86SQ0 1253 aa18.75■□□□□ 0.59
TRAM1-201ENST00000262213 PWWP2AQ96N64 755 aa18.75■□□□□ 0.59
TRAM1-201ENST00000262213 SH2D3AQ9BRG2 576 aa18.75■□□□□ 0.59
TRAM1-201ENST00000262213 MKNK1Q9BUB5 465 aa18.75■□□□□ 0.59
TRAM1-201ENST00000262213 STMN4Q9H169 189 aaPredicted RBP18.75■□□□□ 0.59
TRAM1-201ENST00000262213 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.75■□□□□ 0.59
TRAM1-201ENST00000262213 ASIC3Q9UHC3 531 aa18.75■□□□□ 0.59
TRAM1-201ENST00000262213 MTUS1Q9ULD2 1270 aa18.75■□□□□ 0.59
TRAM1-201ENST00000262213 PCDHA3Q9Y5H8 950 aa18.75■□□□□ 0.59
TRAM1-201ENST00000262213 PASKQ96RG2 1323 aa18.75■□□□□ 0.59
TRAM1-201ENST00000262213 NDUFB10O96000 172 aa18.75■□□□□ 0.59
TRAM1-201ENST00000262213 GH1P01241 217 aa18.75■□□□□ 0.59
TRAM1-201ENST00000262213 GSTA1P08263 222 aa18.75■□□□□ 0.59
TRAM1-201ENST00000262213 PAX7P23759 505 aa18.75■□□□□ 0.59
TRAM1-201ENST00000262213 CHKAP35790 457 aa18.75■□□□□ 0.59
TRAM1-201ENST00000262213 PEX5P50542 639 aa18.75■□□□□ 0.59
TRAM1-201ENST00000262213 PDE6CP51160 858 aa18.75■□□□□ 0.59
TRAM1-201ENST00000262213 NCALDP61601 193 aa18.75■□□□□ 0.59
TRAM1-201ENST00000262213 PPP3CAQ08209 521 aa18.75■□□□□ 0.59
TRAM1-201ENST00000262213 SYDE2Q5VT97 1194 aa18.75■□□□□ 0.59
TRAM1-201ENST00000262213 EP400NLQ6ZTU2 488 aa18.75■□□□□ 0.59
TRAM1-201ENST00000262213 SLC13A5Q86YT5 568 aaPredicted RBP18.75■□□□□ 0.59
TRAM1-201ENST00000262213 SIAH1Q8IUQ4 282 aa18.75■□□□□ 0.59
TRAM1-201ENST00000262213 AGAP11Q8TF27 550 aa18.75■□□□□ 0.59
TRAM1-201ENST00000262213 FIZ1Q96SL8 496 aa18.75■□□□□ 0.59
TRAM1-201ENST00000262213 NUP85Q9BW27 656 aa18.75■□□□□ 0.59
TRAM1-201ENST00000262213 MYH11P35749 1972 aa18.74■□□□□ 0.59
TRAM1-201ENST00000262213 ADAMTSL1Q8N6G6 1762 aa18.74■□□□□ 0.59
TRAM1-201ENST00000262213 K7ENM7 598 aa18.74■□□□□ 0.59
TRAM1-201ENST00000262213 FOSP01100 380 aaPredicted RBP18.74■□□□□ 0.59
TRAM1-201ENST00000262213 ALDH5A1P51649 535 aaPredicted RBP18.74■□□□□ 0.59
TRAM1-201ENST00000262213 APOBEC3HQ6NTF7 200 aaKnown RBP18.74■□□□□ 0.59
TRAM1-201ENST00000262213 C11orf63Q6NUN7 778 aa18.74■□□□□ 0.59
TRAM1-201ENST00000262213 OTOP1Q7RTM1 612 aa18.74■□□□□ 0.59
TRAM1-201ENST00000262213 LMO3Q8TAP4 145 aa18.74■□□□□ 0.59
TRAM1-201ENST00000262213 ATG4AQ8WYN0 398 aa18.74■□□□□ 0.59
TRAM1-201ENST00000262213 HOMER3Q9NSC5 361 aa18.74■□□□□ 0.59
TRAM1-201ENST00000262213 USP15Q9Y4E8 981 aaPredicted RBP18.74■□□□□ 0.59
TRAM1-201ENST00000262213 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.74■□□□□ 0.59
TRAM1-201ENST00000262213 GAS7O60861 476 aa18.74■□□□□ 0.59
TRAM1-201ENST00000262213 SKAP2O75563 359 aaPredicted RBP18.74■□□□□ 0.59
TRAM1-201ENST00000262213 ANP32DO95626 131 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms