RNA–Protein interactions for RNA: snR78

snR78, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR78, Length 87 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR78snR78 BAT2P47176 376 aaKnown RBP2.45□□□□□ -2.02
snR78snR78 DSK2P48510 373 aa2.45□□□□□ -2.02
snR78snR78 RSM27P53305 110 aa2.45□□□□□ -2.02
snR78snR78 ALG9P53868 555 aaKnown RBP2.45□□□□□ -2.02
snR78snR78 RDS3Q06835 107 aaPredicted RBP2.45□□□□□ -2.02
snR78snR78 YAL063C-AQ3E791 96 aa2.45□□□□□ -2.02
snR78snR78 GPX1P36014 167 aa2.44□□□□□ -2.02
snR78snR78 YIL012WP40551 113 aa2.44□□□□□ -2.02
snR78snR78 YFL064CP43540 174 aa2.44□□□□□ -2.02
snR78snR78 DBP9Q06218 594 aaKnown RBP2.44□□□□□ -2.02
snR78snR78 LAG2Q92325 660 aa2.44□□□□□ -2.02
snR78snR78 RRT12P25381 491 aa2.43□□□□□ -2.02
snR78snR78 PIR5P46999 287 aa2.43□□□□□ -2.02
snR78snR78 LIF1P53150 421 aa2.43□□□□□ -2.02
snR78snR78 YDR262WQ12331 272 aa2.43□□□□□ -2.02
snR78snR78 HIS3P06633 220 aa2.42□□□□□ -2.02
snR78snR78 CUE3P53137 624 aaKnown RBP2.42□□□□□ -2.02
snR78snR78 IRC4Q03036 179 aa2.42□□□□□ -2.02
snR78snR78 CDC13P32797 924 aaKnown RBP2.41□□□□□ -2.02
snR78snR78 LAS1P36146 502 aaPredicted RBP2.41□□□□□ -2.02
snR78snR78 SNX41Q04053 625 aa2.41□□□□□ -2.02
snR78snR78 NNT1Q05874 261 aa2.41□□□□□ -2.02
snR78snR78 PHO80P20052 293 aa2.4□□□□□ -2.03
snR78snR78 YEL043WP32618 956 aa2.4□□□□□ -2.03
snR78snR78 PRP24P49960 444 aaKnown RBP2.4□□□□□ -2.03
snR78snR78 YGR168CP53293 376 aa2.4□□□□□ -2.03
snR78snR78 BIO4P53630 237 aa2.4□□□□□ -2.03
snR78snR78 TY3A-GQ12173 290 aa2.4□□□□□ -2.03
snR78snR78 UTP23Q12339 254 aaKnown RBP2.4□□□□□ -2.03
snR78snR78 TY3A-IQ99219 290 aa2.4□□□□□ -2.03
snR78snR78 TAL1P15019 335 aaKnown RBP2.39□□□□□ -2.03
snR78snR78 YBR062CP38239 180 aa2.39□□□□□ -2.03
snR78snR78 CGI121Q03705 181 aaKnown RBP2.39□□□□□ -2.03
snR78snR78 YLR446WQ06204 433 aa2.39□□□□□ -2.03
snR78snR78 VPS68Q12016 184 aa2.39□□□□□ -2.03
snR78snR78 DCP1Q12517 231 aaPredicted RBP2.39□□□□□ -2.03
snR78snR78 ZWF1P11412 505 aaKnown RBP2.38□□□□□ -2.03
snR78snR78 IMP1P28627 190 aa2.38□□□□□ -2.03
snR78snR78 GCG1P32656 232 aaKnown RBP2.38□□□□□ -2.03
snR78snR78 TRM7P38238 310 aaKnown RBP2.38□□□□□ -2.03
snR78snR78 IFM1P25038 676 aa2.37□□□□□ -2.03
snR78snR78 ZRT1P32804 376 aa2.37□□□□□ -2.03
snR78snR78 MRPL3P36516 390 aa2.37□□□□□ -2.03
snR78snR78 MBA1P38300 278 aa2.37□□□□□ -2.03
snR78snR78 YHR035WP38769 630 aa2.37□□□□□ -2.03
snR78snR78 YFL040WP43562 540 aa2.37□□□□□ -2.03
snR78snR78 YJR141WP47172 347 aaPredicted RBP2.37□□□□□ -2.03
snR78snR78 SUE1Q06524 206 aa2.37□□□□□ -2.03
snR78snR78 YCR025CP25352 136 aa2.36□□□□□ -2.03
snR78snR78 YGR266WP53326 701 aa2.36□□□□□ -2.03
snR78snR78 YMR166CQ03829 368 aa2.36□□□□□ -2.03
snR78snR78 KRE29P40026 464 aa2.35□□□□□ -2.03
snR78snR78 AVT6P40074 448 aa2.35□□□□□ -2.03
snR78snR78 RPL18AP0CX49 186 aaKnown RBP2.34□□□□□ -2.03
snR78snR78 RPL18BP0CX50 186 aaKnown RBP2.34□□□□□ -2.03
snR78snR78 TPO5P36029 618 aa2.34□□□□□ -2.03
snR78snR78 MCH2P36032 473 aa2.34□□□□□ -2.03
snR78snR78 NRG2P38082 220 aa2.34□□□□□ -2.03
snR78snR78 DAN1P47178 298 aa2.34□□□□□ -2.03
snR78snR78 TVP15Q03860 143 aa2.34□□□□□ -2.03
snR78snR78 NFI1Q12216 726 aa2.34□□□□□ -2.03
snR78snR78 RPL26AP05743 127 aaKnown RBP2.33□□□□□ -2.04
snR78snR78 RNR2P09938 399 aaKnown RBP2.33□□□□□ -2.04
snR78snR78 RPL26BP53221 127 aaKnown RBP2.33□□□□□ -2.04
snR78snR78 RCF1Q03713 159 aa2.33□□□□□ -2.04
snR78snR78 YDL144CQ07589 356 aa2.33□□□□□ -2.04
snR78snR78 ADH3P07246 375 aaKnown RBP2.32□□□□□ -2.04
snR78snR78 POT1P27796 417 aaKnown RBP RIP-Chip data2.32□□□□□ -2.04not detected
snR78snR78 SIF2P38262 535 aa2.32□□□□□ -2.04
snR78snR78 SPL2P38839 148 aa2.32□□□□□ -2.04
snR78snR78 PML1Q07930 204 aaPredicted RBP2.32□□□□□ -2.04
snR78snR78 COY1P34237 679 aa2.31□□□□□ -2.04
snR78snR78 YJR146WP47174 117 aa2.31□□□□□ -2.04
snR78snR78 GRH1Q04410 372 aaKnown RBP2.31□□□□□ -2.04
snR78snR78 MYO5Q04439 1219 aaKnown RBP2.31□□□□□ -2.04
snR78snR78 VAB2P40003 282 aa2.3□□□□□ -2.04
snR78snR78 INA22P40576 216 aa2.3□□□□□ -2.04
snR78snR78 TPN1P53099 579 aa2.3□□□□□ -2.04
snR78snR78 MRS2Q01926 470 aa2.3□□□□□ -2.04
snR78snR78 SPO77Q06134 477 aa2.3□□□□□ -2.04
snR78snR78 ATG5Q12380 294 aa2.3□□□□□ -2.04
snR78snR78 GAL7P08431 366 aa2.29□□□□□ -2.04
snR78snR78 RPL16BP26785 198 aaKnown RBP2.29□□□□□ -2.04
snR78snR78 YPC1P38298 316 aa2.29□□□□□ -2.04
snR78snR78 POP2P39008 433 aa2.29□□□□□ -2.04
snR78snR78 OKP1P53298 406 aa2.29□□□□□ -2.04
snR78snR78 SWT21P53873 357 aaPredicted RBP2.29□□□□□ -2.04
snR78snR78 OSM1P21375 501 aaKnown RBP2.28□□□□□ -2.04
snR78snR78 SCO1P23833 295 aa2.28□□□□□ -2.04
snR78snR78 IMP3P32899 183 aaPredicted RBP2.28□□□□□ -2.04
snR78snR78 LIN1P38852 340 aaPredicted RBP2.28□□□□□ -2.04
snR78snR78 SUR2P38992 349 aa2.28□□□□□ -2.04
snR78snR78 UTP25P40498 721 aaKnown RBP2.28□□□□□ -2.04
snR78snR78 OST3P48439 350 aa2.28□□□□□ -2.04
snR78snR78 YLL007CQ07799 665 aa2.28□□□□□ -2.04
snR78snR78 SAM4Q08985 325 aaKnown RBP2.28□□□□□ -2.04
snR78snR78 AGC1Q12482 902 aa2.28□□□□□ -2.04
snR78snR78 YHR086W-AQ3E746 53 aa2.28□□□□□ -2.04
snR78snR78 VPH1P32563 840 aaKnown RBP2.27□□□□□ -2.05
snR78snR78 YKL162CP36052 402 aa2.27□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 85.6 ms