RNA–Protein interactions for RNA: YPL104W

MSD1, Transcript of Mitochondrial aspartyl-tRNA synthetase, yeastyeast

Gene MSD1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSD1YPL104W DET1Q99288 334 aaKnown RBP3.29□□□□□ -1.88
MSD1YPL104W AI1P03875 834 aa3.29□□□□□ -1.88
MSD1YPL104W YSF3P0C074 85 aaPredicted RBP3.29□□□□□ -1.88
MSD1YPL104W NFT1P0CE68 1218 aa3.29□□□□□ -1.88
MSD1YPL104W PHO80P20052 293 aa3.29□□□□□ -1.88
MSD1YPL104W PRP28P23394 588 aa3.29□□□□□ -1.88
MSD1YPL104W YCR100CP25606 316 aa3.29□□□□□ -1.88
MSD1YPL104W GAR1P28007 205 aaKnown RBP3.29□□□□□ -1.88
MSD1YPL104W UTP25P40498 721 aaKnown RBP3.29□□□□□ -1.88
MSD1YPL104W YJL218WP40892 196 aaKnown RBP3.29□□□□□ -1.88
MSD1YPL104W STB1P42845 420 aa3.29□□□□□ -1.88
MSD1YPL104W ALK1P43633 760 aaKnown RBP3.29□□□□□ -1.88
MSD1YPL104W MDE1P47095 244 aa3.29□□□□□ -1.88
MSD1YPL104W YDL183CP48569 320 aa3.29□□□□□ -1.88
MSD1YPL104W TRM9P49957 279 aa3.29□□□□□ -1.88
MSD1YPL104W VPS73P53142 486 aaKnown RBP3.29□□□□□ -1.88
MSD1YPL104W PXR1P53335 271 aaPredicted RBP3.29□□□□□ -1.88
MSD1YPL104W CPR8P53728 308 aa3.29□□□□□ -1.88
MSD1YPL104W MNT4P53745 580 aa3.29□□□□□ -1.88
MSD1YPL104W FDC1Q03034 503 aa3.29□□□□□ -1.88
MSD1YPL104W SYO1Q07395 620 aa3.29□□□□□ -1.88
MSD1YPL104W BRX1Q08235 291 aaKnown RBP3.29□□□□□ -1.88
MSD1YPL104W YDL176WQ12027 708 aa3.29□□□□□ -1.88
MSD1YPL104W PSF1Q12488 208 aa3.29□□□□□ -1.88
MSD1YPL104W YBR126W-AQ8TGU7 68 aa3.29□□□□□ -1.88
MSD1YPL104W FMP27Q06179 2628 aa3.28□□□□□ -1.88
MSD1YPL104W GCN4P03069 281 aa3.28□□□□□ -1.88
MSD1YPL104W ADE5,7P07244 802 aaKnown RBP3.28□□□□□ -1.88
MSD1YPL104W GCD1P09032 578 aaPredicted RBP3.28□□□□□ -1.88
MSD1YPL104W YGL041W-AP0C5N3 154 aa3.28□□□□□ -1.88
MSD1YPL104W RPL20AP0CX23 172 aaKnown RBP3.28□□□□□ -1.88
MSD1YPL104W RPL20BP0CX24 172 aaPredicted RBP3.28□□□□□ -1.88
MSD1YPL104W SEC12P11655 471 aa3.28□□□□□ -1.88
MSD1YPL104W BAR1P12630 587 aa3.28□□□□□ -1.88
MSD1YPL104W ERD1P16151 362 aa3.28□□□□□ -1.88
MSD1YPL104W PDX1P16451 410 aa3.28□□□□□ -1.88
MSD1YPL104W ERD2P18414 219 aa3.28□□□□□ -1.88
MSD1YPL104W GPI12P23797 304 aa3.28□□□□□ -1.88
MSD1YPL104W HSP30P25619 332 aa3.28□□□□□ -1.88
MSD1YPL104W MRP20P32387 263 aa3.28□□□□□ -1.88
MSD1YPL104W MDL1P33310 695 aa3.28□□□□□ -1.88
MSD1YPL104W RIB7P33312 244 aa3.28□□□□□ -1.88
MSD1YPL104W JEN1P36035 616 aa3.28□□□□□ -1.88
MSD1YPL104W SHE1P38200 338 aa3.28□□□□□ -1.88
MSD1YPL104W HRB1P38922 454 aaKnown RBP RIP-Chip data3.28□□□□□ -1.88not detected
MSD1YPL104W VPS52P39904 641 aa3.28□□□□□ -1.88
MSD1YPL104W YIL166CP40445 542 aa3.28□□□□□ -1.88
MSD1YPL104W URM1P40554 99 aaPredicted RBP3.28□□□□□ -1.88
MSD1YPL104W PFS2P42841 465 aaKnown RBP3.28□□□□□ -1.88
MSD1YPL104W YAE1P47118 141 aaPredicted RBP3.28□□□□□ -1.88
MSD1YPL104W IMD3P50095 523 aaKnown RBP3.28□□□□□ -1.88
MSD1YPL104W YGR067CP53243 804 aa3.28□□□□□ -1.88
MSD1YPL104W PGA1P53896 198 aa3.28□□□□□ -1.88
MSD1YPL104W SNT309Q06091 175 aaPredicted RBP3.28□□□□□ -1.88
MSD1YPL104W IPK1Q06667 281 aa3.28□□□□□ -1.88
MSD1YPL104W CDA2Q06703 312 aa3.28□□□□□ -1.88
MSD1YPL104W FRE5Q08908 694 aa3.28□□□□□ -1.88
MSD1YPL104W FMP40Q08968 688 aaPredicted RBP3.28□□□□□ -1.88
MSD1YPL104W RCN2Q12044 265 aa3.28□□□□□ -1.88
MSD1YPL104W POM34Q12445 299 aa3.28□□□□□ -1.88
MSD1YPL104W STP22P25604 385 aa3.27□□□□□ -1.89
MSD1YPL104W SNC1P31109 117 aa3.27□□□□□ -1.89
MSD1YPL104W ERG3P32353 365 aa3.27□□□□□ -1.89
MSD1YPL104W PUP2P32379 260 aa3.27□□□□□ -1.89
MSD1YPL104W TIM12P32830 109 aa3.27□□□□□ -1.89
MSD1YPL104W RSM22P36056 628 aa3.27□□□□□ -1.89
MSD1YPL104W YBR063CP38083 404 aa3.27□□□□□ -1.89
MSD1YPL104W PSD1P39006 500 aa3.27□□□□□ -1.89
MSD1YPL104W FMC1P40491 155 aa3.27□□□□□ -1.89
MSD1YPL104W YGL235WP53071 178 aa3.27□□□□□ -1.89
MSD1YPL104W YGR266WP53326 701 aa3.27□□□□□ -1.89
MSD1YPL104W NCE101Q02820 53 aa3.27□□□□□ -1.89
MSD1YPL104W PLB2Q03674 706 aa3.27□□□□□ -1.89
MSD1YPL104W TDA6Q06466 467 aa3.27□□□□□ -1.89
MSD1YPL104W THI72Q08579 599 aa3.27□□□□□ -1.89
MSD1YPL104W RKM1Q08961 583 aaPredicted RBP3.27□□□□□ -1.89
MSD1YPL104W YOR289WQ12012 251 aaPredicted RBP3.27□□□□□ -1.89
MSD1YPL104W THP3Q12049 470 aaKnown RBP3.27□□□□□ -1.89
MSD1YPL104W YDR061WQ12298 539 aa3.27□□□□□ -1.89
MSD1YPL104W NPC2Q12408 173 aa3.27□□□□□ -1.89
MSD1YPL104W DFG16Q99234 619 aa3.27□□□□□ -1.89
MSD1YPL104W FAS1P07149 2051 aaKnown RBP3.27□□□□□ -1.89
MSD1YPL104W YEL009C-AA0A023PZF2 135 aa3.27□□□□□ -1.89
MSD1YPL104W PET122P10355 254 aa3.27□□□□□ -1.89
MSD1YPL104W GLK1P17709 500 aaKnown RBP3.27□□□□□ -1.89
MSD1YPL104W YPK2P18961 677 aa3.27□□□□□ -1.89
MSD1YPL104W FAA1P30624 700 aaKnown RBP3.27□□□□□ -1.89
MSD1YPL104W PUB1P32588 453 aaKnown RBP RIP-Chip data3.27□□□□□ -1.89not detected
MSD1YPL104W ZRT3P34240 503 aa3.27□□□□□ -1.89
MSD1YPL104W DTR1P38125 572 aa3.27□□□□□ -1.89
MSD1YPL104W YHK8P38776 514 aa3.27□□□□□ -1.89
MSD1YPL104W RRP4P38792 359 aaKnown RBP3.27□□□□□ -1.89
MSD1YPL104W IPI1P38803 334 aaPredicted RBP3.27□□□□□ -1.89
MSD1YPL104W GET2P40056 285 aa3.27□□□□□ -1.89
MSD1YPL104W YIL067CP40514 678 aa3.27□□□□□ -1.89
MSD1YPL104W CIN1P40987 1014 aa3.27□□□□□ -1.89
MSD1YPL104W GDS1P41913 522 aa3.27□□□□□ -1.89
MSD1YPL104W SER2P42941 309 aa3.27□□□□□ -1.89
MSD1YPL104W NRM1P53718 249 aa3.27□□□□□ -1.89
MSD1YPL104W YNR062CP53748 327 aa3.27□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms