RNA–Protein interactions for RNA: YOR138C

RUP1, Transcript of Protein that regulates ubiquitination of Rsp5p, yeastyeast

Gene RUP1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RUP1YOR138C ERG24P32462 438 aaKnown RBP6.82□□□□□ -1.32
RUP1YOR138C SRB5P32585 307 aa6.82□□□□□ -1.32
RUP1YOR138C VNX1P42839 908 aa6.82□□□□□ -1.32
RUP1YOR138C SOK2P53438 785 aaPredicted RBP6.82□□□□□ -1.32
RUP1YOR138C YNR062CP53748 327 aa6.82□□□□□ -1.32
RUP1YOR138C SSY1Q03770 852 aa6.82□□□□□ -1.32
RUP1YOR138C PEX30Q06169 523 aa6.82□□□□□ -1.32
RUP1YOR138C OPI10Q08202 246 aa6.82□□□□□ -1.32
RUP1YOR138C BTS1Q12051 335 aa6.82□□□□□ -1.32
RUP1YOR138C MRPL33P20084 86 aa6.81□□□□□ -1.32
RUP1YOR138C GPI12P23797 304 aa6.81□□□□□ -1.32
RUP1YOR138C PRE2P30656 287 aaKnown RBP6.81□□□□□ -1.32
RUP1YOR138C MKS1P34072 584 aa6.81□□□□□ -1.32
RUP1YOR138C OAR1P35731 278 aa6.81□□□□□ -1.32
RUP1YOR138C RRP3P38712 501 aaKnown RBP6.81□□□□□ -1.32
RUP1YOR138C YIL166CP40445 542 aa6.81□□□□□ -1.32
RUP1YOR138C UTP25P40498 721 aaKnown RBP6.81□□□□□ -1.32
RUP1YOR138C SPC19Q03954 165 aa6.81□□□□□ -1.32
RUP1YOR138C RSC58Q07979 502 aa6.81□□□□□ -1.32
RUP1YOR138C XYL2Q07993 356 aa6.81□□□□□ -1.32
RUP1YOR138C DET1Q99288 334 aaKnown RBP6.81□□□□□ -1.32
RUP1YOR138C FSH3Q99369 266 aa6.81□□□□□ -1.32
RUP1YOR138C REP2P03872 296 aa6.81□□□□□ -1.32
RUP1YOR138C GAL4P04386 881 aa6.81□□□□□ -1.32
RUP1YOR138C CPR3P25719 182 aa6.81□□□□□ -1.32
RUP1YOR138C SUA5P32579 426 aa6.81□□□□□ -1.32
RUP1YOR138C SFA1P32771 386 aa6.81□□□□□ -1.32
RUP1YOR138C PPG1P32838 368 aa6.81□□□□□ -1.32
RUP1YOR138C ECM31P38122 312 aa6.81□□□□□ -1.32
RUP1YOR138C NSG1P38837 291 aa6.81□□□□□ -1.32
RUP1YOR138C HIS6P40545 261 aa6.81□□□□□ -1.32
RUP1YOR138C AIM6Q07716 390 aa6.81□□□□□ -1.32
RUP1YOR138C BRX1Q08235 291 aaKnown RBP6.81□□□□□ -1.32
RUP1YOR138C TRM13Q12383 476 aa6.81□□□□□ -1.32
RUP1YOR138C YJR112W-AQ3E743 109 aa6.81□□□□□ -1.32
RUP1YOR138C HOM3P10869 527 aa6.8□□□□□ -1.32
RUP1YOR138C STE50P25344 346 aa6.8□□□□□ -1.32
RUP1YOR138C SRB6P32570 121 aa6.8□□□□□ -1.32
RUP1YOR138C MTC4P38335 694 aaKnown RBP6.8□□□□□ -1.32
RUP1YOR138C LAG1P38703 411 aa6.8□□□□□ -1.32
RUP1YOR138C SOL3P38858 249 aa6.8□□□□□ -1.32
RUP1YOR138C YJR111CP47148 283 aaKnown RBP6.8□□□□□ -1.32
RUP1YOR138C SNN1P48232 102 aa6.8□□□□□ -1.32
RUP1YOR138C FHN1P53279 174 aa6.8□□□□□ -1.32
RUP1YOR138C RSM27P53305 110 aa6.8□□□□□ -1.32
RUP1YOR138C SNT309Q06091 175 aaPredicted RBP6.8□□□□□ -1.32
RUP1YOR138C TY1A-DR3Q12441 440 aa6.8□□□□□ -1.32
RUP1YOR138C NAG1Q8TGN9 163 aa6.8□□□□□ -1.32
RUP1YOR138C MDM35O60200 86 aa6.79□□□□□ -1.32
RUP1YOR138C COX9P07255 59 aa6.79□□□□□ -1.32
RUP1YOR138C PHO2P07269 559 aa6.79□□□□□ -1.32
RUP1YOR138C HOM2P13663 365 aaKnown RBP6.79□□□□□ -1.32
RUP1YOR138C FUR1P18562 216 aaKnown RBP6.79□□□□□ -1.32
RUP1YOR138C BUB3P26449 341 aa6.79□□□□□ -1.32
RUP1YOR138C PTR2P32901 601 aa6.79□□□□□ -1.32
RUP1YOR138C VAM7P32912 316 aa6.79□□□□□ -1.32
RUP1YOR138C KAE1P36132 386 aa6.79□□□□□ -1.32
RUP1YOR138C COS8P38723 381 aa6.79□□□□□ -1.32
RUP1YOR138C ZIM17P42844 174 aa6.79□□□□□ -1.32
RUP1YOR138C LYS20P48570 428 aaKnown RBP6.79□□□□□ -1.32
RUP1YOR138C YDR444WQ04093 687 aa6.79□□□□□ -1.32
RUP1YOR138C SEC13Q04491 297 aaKnown RBP6.79□□□□□ -1.32
RUP1YOR138C DXO1Q06349 442 aa6.79□□□□□ -1.32
RUP1YOR138C PRM4Q12498 284 aa6.79□□□□□ -1.32
RUP1YOR138C TDH2P00358 332 aaKnown RBP6.79□□□□□ -1.32
RUP1YOR138C CPR2P23285 205 aa6.79□□□□□ -1.32
RUP1YOR138C SSH4P32343 579 aa6.79□□□□□ -1.32
RUP1YOR138C TIM12P32830 109 aa6.79□□□□□ -1.32
RUP1YOR138C YOR062CP36025 268 aa6.79□□□□□ -1.32
RUP1YOR138C VPS51P36116 164 aa6.79□□□□□ -1.32
RUP1YOR138C CHK1P38147 527 aa6.79□□□□□ -1.32
RUP1YOR138C BMT5P40493 336 aa6.79□□□□□ -1.32
RUP1YOR138C GLR1P41921 483 aaKnown RBP6.79□□□□□ -1.32
RUP1YOR138C MCM22P47167 239 aa6.79□□□□□ -1.32
RUP1YOR138C OGG1P53397 376 aaPredicted RBP6.79□□□□□ -1.32
RUP1YOR138C BUD25P85052 153 aa6.79□□□□□ -1.32
RUP1YOR138C DCS1Q06151 350 aa6.79□□□□□ -1.32
RUP1YOR138C ANT1Q06497 328 aa6.79□□□□□ -1.32
RUP1YOR138C DFG16Q99234 619 aa6.79□□□□□ -1.32
RUP1YOR138C FPR1P20081 114 aaKnown RBP6.78□□□□□ -1.32
RUP1YOR138C RNQ1P25367 405 aa6.78□□□□□ -1.32
RUP1YOR138C MDH3P32419 343 aaKnown RBP RIP-Chip data6.78□□□□□ -1.32not detected
RUP1YOR138C CHS7P38843 316 aa6.78□□□□□ -1.32
RUP1YOR138C SMK1P41808 388 aa6.78□□□□□ -1.32
RUP1YOR138C PHB2P50085 310 aa6.78□□□□□ -1.32
RUP1YOR138C YGL159WP53110 370 aa6.78□□□□□ -1.32
RUP1YOR138C TPC1P53257 314 aa6.78□□□□□ -1.32
RUP1YOR138C SNU23Q12368 194 aaPredicted RBP6.78□□□□□ -1.32
RUP1YOR138C IPP1P00817 287 aaKnown RBP6.77□□□□□ -1.32
RUP1YOR138C ARO3P14843 370 aaKnown RBP6.77□□□□□ -1.32
RUP1YOR138C YPK2P18961 677 aa6.77□□□□□ -1.32
RUP1YOR138C SCL1P21243 252 aaKnown RBP6.77□□□□□ -1.32
RUP1YOR138C MRPL37P36532 105 aa6.77□□□□□ -1.32
RUP1YOR138C SDH8P38345 138 aa6.77□□□□□ -1.32
RUP1YOR138C NEM1P38757 446 aa6.77□□□□□ -1.32
RUP1YOR138C TRR2P38816 342 aa6.77□□□□□ -1.32
RUP1YOR138C ARO9P38840 513 aaPredicted RBP6.77□□□□□ -1.32
RUP1YOR138C YHC3P47040 408 aa6.77□□□□□ -1.32
RUP1YOR138C PEX25Q02969 394 aa6.77□□□□□ -1.32
RUP1YOR138C YPR084WQ06821 456 aa6.77□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 118 ms