RNA–Protein interactions for RNA: YOR068C

VAM10, Transcript of Protein involved in vacuole morphogenesis, yeast

Gene VAM10, Length 345 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VAM10	YOR068C	HSP31	Q04432	237 aa		3.1	□□□□□ -1.91
VAM10	YOR068C	YMR034C	Q05131	434 aa	Predicted RBP	3.1	□□□□□ -1.91
VAM10	YOR068C	NEJ1	Q06148	342 aa		3.1	□□□□□ -1.91
VAM10	YOR068C	RIF2	Q06208	395 aa		3.1	□□□□□ -1.91
VAM10	YOR068C	POM33	Q12164	279 aa		3.1	□□□□□ -1.91
VAM10	YOR068C	YOR114W	Q12219	294 aa		3.1	□□□□□ -1.91
VAM10	YOR068C	YOR012W	Q12351	137 aa		3.1	□□□□□ -1.91
VAM10	YOR068C	YKL183C-A	Q3E765	70 aa		3.1	□□□□□ -1.91
VAM10	YOR068C	GDH1	P07262	454 aa	Known RBP	3.09	□□□□□ -1.91
VAM10	YOR068C	RIP1	P08067	215 aa		3.09	□□□□□ -1.91
VAM10	YOR068C	RFA3	P26755	122 aa	Known RBP	3.09	□□□□□ -1.91
VAM10	YOR068C	FUN26	P31381	517 aa		3.09	□□□□□ -1.91
VAM10	YOR068C	TFC1	P32367	649 aa		3.09	□□□□□ -1.91
VAM10	YOR068C	MDH3	P32419	343 aa	Known RBP RIP-Chip data	3.09	□□□□□ -1.91	not detected
VAM10	YOR068C	UTR4	P32626	227 aa		3.09	□□□□□ -1.91
VAM10	YOR068C	VPS21	P36017	210 aa	Known RBP	3.09	□□□□□ -1.91
VAM10	YOR068C	PHD1	P36093	366 aa		3.09	□□□□□ -1.91
VAM10	YOR068C	ASC1	P38011	319 aa	Known RBP	3.09	□□□□□ -1.91
VAM10	YOR068C	FMP23	P38231	175 aa		3.09	□□□□□ -1.91
VAM10	YOR068C	ARC40	P38328	384 aa	Known RBP	3.09	□□□□□ -1.91
VAM10	YOR068C	PRS2	P38620	318 aa	Known RBP	3.09	□□□□□ -1.91
VAM10	YOR068C	HIS2	P38635	335 aa		3.09	□□□□□ -1.91
VAM10	YOR068C	WSC4	P38739	605 aa		3.09	□□□□□ -1.91
VAM10	YOR068C	SPG5	P42933	373 aa		3.09	□□□□□ -1.91
VAM10	YOR068C	YJR141W	P47172	347 aa	Predicted RBP	3.09	□□□□□ -1.91
VAM10	YOR068C	ROG1	P53118	685 aa		3.09	□□□□□ -1.91
VAM10	YOR068C	GPI1	P53306	609 aa		3.09	□□□□□ -1.91
VAM10	YOR068C	BUD32	P53323	261 aa		3.09	□□□□□ -1.91
VAM10	YOR068C	SAE3	P89114	91 aa		3.09	□□□□□ -1.91
VAM10	YOR068C	RHO4	Q00246	291 aa		3.09	□□□□□ -1.91
VAM10	YOR068C	YPL068C	Q02749	293 aa		3.09	□□□□□ -1.91
VAM10	YOR068C	YMR279C	Q03263	540 aa		3.09	□□□□□ -1.91
VAM10	YOR068C	RUB1	Q03919	77 aa		3.09	□□□□□ -1.91
VAM10	YOR068C	BUR2	Q05949	395 aa		3.09	□□□□□ -1.91
VAM10	YOR068C	FRQ1	Q06389	190 aa		3.09	□□□□□ -1.91
VAM10	YOR068C	APC9	Q12107	265 aa		3.09	□□□□□ -1.91
VAM10	YOR068C	FCY22	Q12119	530 aa		3.09	□□□□□ -1.91
VAM10	YOR068C	BSC1	Q12140	328 aa		3.09	□□□□□ -1.91
VAM10	YOR068C	ICT1	Q12385	394 aa		3.09	□□□□□ -1.91
VAM10	YOR068C	SPO24	Q3E752	67 aa		3.09	□□□□□ -1.91
VAM10	YOR068C	SLO1	Q3E784	85 aa		3.09	□□□□□ -1.91
VAM10	YOR068C	YLR361C-A	Q3E795	98 aa		3.09	□□□□□ -1.91
VAM10	YOR068C	YCL012C	Q8J0M4	134 aa		3.09	□□□□□ -1.91
VAM10	YOR068C	TRM3	Q07527	1436 aa		3.09	□□□□□ -1.92
VAM10	YOR068C	RPO31	P04051	1460 aa		3.09	□□□□□ -1.92
VAM10	YOR068C	YOR304C-A	O14468	76 aa		3.08	□□□□□ -1.92
VAM10	YOR068C	ADH2	P00331	348 aa	Known RBP	3.08	□□□□□ -1.92
VAM10	YOR068C	IPP1	P00817	287 aa	Known RBP	3.08	□□□□□ -1.92
VAM10	YOR068C	MES1	P00958	751 aa	Known RBP	3.08	□□□□□ -1.92
VAM10	YOR068C	BAR1	P12630	587 aa		3.08	□□□□□ -1.92
VAM10	YOR068C	NSP1	P14907	823 aa	Known RBP	3.08	□□□□□ -1.92
VAM10	YOR068C	SPT10	P35208	640 aa		3.08	□□□□□ -1.92
VAM10	YOR068C	SPP381	P38282	291 aa	Predicted RBP	3.08	□□□□□ -1.92
VAM10	YOR068C	EFM1	P38732	585 aa		3.08	□□□□□ -1.92
VAM10	YOR068C	DHH1	P39517	506 aa	Known RBP	3.08	□□□□□ -1.92
VAM10	YOR068C	CIN2	P46670	268 aa		3.08	□□□□□ -1.92
VAM10	YOR068C	TRS85	P46944	698 aa		3.08	□□□□□ -1.92
VAM10	YOR068C	YJL016W	P47072	561 aa		3.08	□□□□□ -1.92
VAM10	YOR068C	ABF2	Q02486	183 aa		3.08	□□□□□ -1.92
VAM10	YOR068C	DIG1	Q03063	452 aa	Known RBP	3.08	□□□□□ -1.92
VAM10	YOR068C	AIM34	Q03673	198 aa		3.08	□□□□□ -1.92
VAM10	YOR068C	YDR415C	Q04033	374 aa	Predicted RBP	3.08	□□□□□ -1.92
VAM10	YOR068C	LDB18	Q07887	179 aa		3.08	□□□□□ -1.92
VAM10	YOR068C	PLB3	Q08108	686 aa		3.08	□□□□□ -1.92
VAM10	YOR068C	SIA1	Q12212	622 aa		3.08	□□□□□ -1.92
VAM10	YOR068C	YOR214C	Q12282	236 aa		3.08	□□□□□ -1.92
VAM10	YOR068C	RKM5	Q12367	367 aa		3.08	□□□□□ -1.92
VAM10	YOR068C	NCA2	Q12374	616 aa		3.08	□□□□□ -1.92
VAM10	YOR068C	RGS2	Q99188	309 aa		3.08	□□□□□ -1.92
VAM10	YOR068C	PDR18	P53756	1333 aa		3.08	□□□□□ -1.92
VAM10	YOR068C	DRS2	P39524	1355 aa		3.08	□□□□□ -1.92
VAM10	YOR068C	YDR157W	A0A023PZE8	133 aa		3.07	□□□□□ -1.92
VAM10	YOR068C	HIS1	P00498	297 aa	Known RBP	3.07	□□□□□ -1.92
VAM10	YOR068C	ASP3-2	P0CX77	362 aa		3.07	□□□□□ -1.92
VAM10	YOR068C	ASP3-3	P0CX78	362 aa		3.07	□□□□□ -1.92
VAM10	YOR068C	ASP3-4	P0CX79	362 aa		3.07	□□□□□ -1.92
VAM10	YOR068C	ASP3-1	P0CZ17	362 aa		3.07	□□□□□ -1.92
VAM10	YOR068C	AMD1	P15274	810 aa	Known RBP	3.07	□□□□□ -1.92
VAM10	YOR068C	SEC22	P22214	214 aa		3.07	□□□□□ -1.92
VAM10	YOR068C	PRE7	P23724	241 aa	Known RBP	3.07	□□□□□ -1.92
VAM10	YOR068C	YCR043C	P25361	127 aa		3.07	□□□□□ -1.92
VAM10	YOR068C	RPS2	P25443	254 aa	Known RBP	3.07	□□□□□ -1.92
VAM10	YOR068C	DCC1	P25559	380 aa		3.07	□□□□□ -1.92
VAM10	YOR068C	SUA7	P29055	345 aa	Predicted RBP	3.07	□□□□□ -1.92
VAM10	YOR068C	APE2	P32454	952 aa	Known RBP	3.07	□□□□□ -1.92
VAM10	YOR068C	SGE1	P33335	543 aa		3.07	□□□□□ -1.92
VAM10	YOR068C	PRX1	P34227	261 aa	Known RBP	3.07	□□□□□ -1.92
VAM10	YOR068C	MRX3	P38172	270 aa		3.07	□□□□□ -1.92
VAM10	YOR068C	RRN10	P38204	145 aa		3.07	□□□□□ -1.92
VAM10	YOR068C	POP4	P38336	279 aa		3.07	□□□□□ -1.92
VAM10	YOR068C	RCK2	P38623	610 aa		3.07	□□□□□ -1.92
VAM10	YOR068C	SBE22	P38814	852 aa		3.07	□□□□□ -1.92
VAM10	YOR068C	LSM12	P38828	187 aa	Known RBP	3.07	□□□□□ -1.92
VAM10	YOR068C	TDA11	P38854	504 aa		3.07	□□□□□ -1.92
VAM10	YOR068C	PCF11	P39081	626 aa	Predicted RBP	3.07	□□□□□ -1.92
VAM10	YOR068C	DSE1	P40077	573 aa		3.07	□□□□□ -1.92
VAM10	YOR068C	RRG9	P40156	214 aa		3.07	□□□□□ -1.92
VAM10	YOR068C	LYS12	P40495	371 aa	Known RBP	3.07	□□□□□ -1.92
VAM10	YOR068C	ASG7	P46993	209 aa		3.07	□□□□□ -1.92
VAM10	YOR068C	YJR011C	P47086	261 aa	Predicted RBP	3.07	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 18.6 ms