RNA–Protein interactions for RNA: YNL311C

SKP2, Transcript of F-box protein of unknown function, yeast

Gene SKP2, Length 2,292 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP2	YNL311C	SOL1	P50278	321 aa		2.39	□□□□□ -2.03
SKP2	YNL311C	CWC22	P53333	577 aa	Known RBP	2.39	□□□□□ -2.03
SKP2	YNL311C	MPP6	P53725	186 aa	Predicted RBP	2.39	□□□□□ -2.03
SKP2	YNL311C	YMR166C	Q03829	368 aa		2.39	□□□□□ -2.03
SKP2	YNL311C	YPL191C	Q08930	360 aa		2.39	□□□□□ -2.03
SKP2	YNL311C	PUT2	P07275	575 aa		2.38	□□□□□ -2.03
SKP2	YNL311C	TY1A-LR4	P0C2I8	440 aa	Known RBP	2.38	□□□□□ -2.03
SKP2	YNL311C	TY1A-DR6	P0CX70	440 aa		2.38	□□□□□ -2.03
SKP2	YNL311C	TY1A-ER1	P0CX71	440 aa		2.38	□□□□□ -2.03
SKP2	YNL311C	TY1A-LR2	P0CX72	440 aa		2.38	□□□□□ -2.03
SKP2	YNL311C	TY1A-PL	P0CX73	440 aa		2.38	□□□□□ -2.03
SKP2	YNL311C	TY1A-JR1	P0CX74	440 aa		2.38	□□□□□ -2.03
SKP2	YNL311C	TY1A-LR3	P0CX75	440 aa		2.38	□□□□□ -2.03
SKP2	YNL311C	TY1A-ML2	P0CX76	440 aa		2.38	□□□□□ -2.03
SKP2	YNL311C	HSC82	P15108	705 aa	Known RBP	2.38	□□□□□ -2.03
SKP2	YNL311C	CBF1	P17106	351 aa		2.38	□□□□□ -2.03
SKP2	YNL311C	POL4	P25615	582 aa		2.38	□□□□□ -2.03
SKP2	YNL311C	UTR5	P32630	166 aa		2.38	□□□□□ -2.03
SKP2	YNL311C	YER184C	P39961	794 aa		2.38	□□□□□ -2.03
SKP2	YNL311C	YEL068C	P39977	110 aa		2.38	□□□□□ -2.03
SKP2	YNL311C	BUR6	P40096	142 aa		2.38	□□□□□ -2.03
SKP2	YNL311C	YFR035C	P43608	114 aa		2.38	□□□□□ -2.03
SKP2	YNL311C	YJR012C	P47087	207 aa		2.38	□□□□□ -2.03
SKP2	YNL311C	COS6	P53344	381 aa		2.38	□□□□□ -2.03
SKP2	YNL311C	YMR209C	Q03648	457 aa		2.38	□□□□□ -2.03
SKP2	YNL311C	HOF1	Q05080	669 aa		2.38	□□□□□ -2.03
SKP2	YNL311C	SSQ1	Q05931	657 aa	Predicted RBP	2.38	□□□□□ -2.03
SKP2	YNL311C	YET3	Q07451	203 aa		2.38	□□□□□ -2.03
SKP2	YNL311C	UAF30	Q08747	228 aa		2.38	□□□□□ -2.03
SKP2	YNL311C	TY1A-GR1	Q12085	440 aa		2.38	□□□□□ -2.03
SKP2	YNL311C	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	2.38	□□□□□ -2.03
SKP2	YNL311C	TY1A-OL	Q92392	440 aa	Known RBP	2.38	□□□□□ -2.03
SKP2	YNL311C	HTS1	P07263	546 aa	Known RBP	2.38	□□□□□ -2.03
SKP2	YNL311C	MRP13	P12686	339 aa		2.38	□□□□□ -2.03
SKP2	YNL311C	HEM15	P16622	393 aa		2.38	□□□□□ -2.03
SKP2	YNL311C	ERD2	P18414	219 aa		2.38	□□□□□ -2.03
SKP2	YNL311C	HSP30	P25619	332 aa		2.38	□□□□□ -2.03
SKP2	YNL311C	BUB2	P26448	306 aa	Predicted RBP	2.38	□□□□□ -2.03
SKP2	YNL311C	NUP2	P32499	720 aa		2.38	□□□□□ -2.03
SKP2	YNL311C	YBL029W	P38201	376 aa		2.38	□□□□□ -2.03
SKP2	YNL311C	CAJ1	P39101	391 aa		2.38	□□□□□ -2.03
SKP2	YNL311C	SNM1	P40993	198 aa		2.38	□□□□□ -2.03
SKP2	YNL311C	CAB4	P53332	305 aa		2.38	□□□□□ -2.03
SKP2	YNL311C	WSC2	P53832	503 aa		2.38	□□□□□ -2.03
SKP2	YNL311C	ACT1	P60010	375 aa	Known RBP	2.38	□□□□□ -2.03
SKP2	YNL311C	RSC9	Q03124	581 aa		2.38	□□□□□ -2.03
SKP2	YNL311C	ARV1	Q06541	321 aa		2.38	□□□□□ -2.03
SKP2	YNL311C	VPS36	Q06696	566 aa		2.38	□□□□□ -2.03
SKP2	YNL311C	ACM1	Q08981	209 aa		2.38	□□□□□ -2.03
SKP2	YNL311C	RTN2	Q12443	393 aa		2.38	□□□□□ -2.03
SKP2	YNL311C	DFG16	Q99234	619 aa		2.38	□□□□□ -2.03
SKP2	YNL311C	TDH2	P00358	332 aa	Known RBP	2.37	□□□□□ -2.03
SKP2	YNL311C	TDH3	P00359	332 aa	Known RBP RIP-Chip data	2.37	□□□□□ -2.03	not detected
SKP2	YNL311C	OPI3	P05375	206 aa		2.37	□□□□□ -2.03
SKP2	YNL311C	ENA1	P13587	1091 aa		2.37	□□□□□ -2.03
SKP2	YNL311C	MRPL36	P36531	177 aa		2.37	□□□□□ -2.03
SKP2	YNL311C	CCT4	P39078	528 aa	Known RBP	2.37	□□□□□ -2.03
SKP2	YNL311C	GDI1	P39958	451 aa	Known RBP	2.37	□□□□□ -2.03
SKP2	YNL311C	MTR3	P48240	250 aa	Predicted RBP	2.37	□□□□□ -2.03
SKP2	YNL311C	SAM37	P50110	327 aa		2.37	□□□□□ -2.03
SKP2	YNL311C	APM1	Q00776	475 aa	Predicted RBP	2.37	□□□□□ -2.03
SKP2	YNL311C	ENA2	Q01896	1091 aa		2.37	□□□□□ -2.03
SKP2	YNL311C	DAL4	Q04895	635 aa		2.37	□□□□□ -2.03
SKP2	YNL311C	SYO1	Q07395	620 aa		2.37	□□□□□ -2.03
SKP2	YNL311C	BTS1	Q12051	335 aa		2.37	□□□□□ -2.03
SKP2	YNL311C	ENA5	Q12691	1091 aa		2.37	□□□□□ -2.03
SKP2	YNL311C	SGA1	P08019	549 aa		2.37	□□□□□ -2.03
SKP2	YNL311C	CDC34	P14682	295 aa		2.37	□□□□□ -2.03
SKP2	YNL311C	CLB3	P24870	427 aa		2.37	□□□□□ -2.03
SKP2	YNL311C	RPL5	P26321	297 aa	Known RBP	2.37	□□□□□ -2.03
SKP2	YNL311C	ECM31	P38122	312 aa		2.37	□□□□□ -2.03
SKP2	YNL311C	ISC1	P40015	477 aa	Known RBP	2.37	□□□□□ -2.03
SKP2	YNL311C	ARB1	P40024	610 aa	Known RBP	2.37	□□□□□ -2.03
SKP2	YNL311C	PEP8	P40335	379 aa		2.37	□□□□□ -2.03
SKP2	YNL311C	INA22	P40576	216 aa		2.37	□□□□□ -2.03
SKP2	YNL311C	ECM27	P47144	725 aa		2.37	□□□□□ -2.03
SKP2	YNL311C	NOP19	P53317	196 aa	Predicted RBP	2.37	□□□□□ -2.03
SKP2	YNL311C	RSM24	Q03976	319 aa		2.37	□□□□□ -2.03
SKP2	YNL311C	RIO1	Q12196	484 aa	Known RBP	2.37	□□□□□ -2.03
SKP2	YNL311C	YHR212W-A	P0CX91	67 aa		2.36	□□□□□ -2.03
SKP2	YNL311C	ROX3	P25046	220 aa		2.36	□□□□□ -2.03
SKP2	YNL311C	VPS24	P36095	224 aa	Known RBP	2.36	□□□□□ -2.03
SKP2	YNL311C	MRPL10	P36520	322 aa		2.36	□□□□□ -2.03
SKP2	YNL311C	PEX32	P38292	413 aa		2.36	□□□□□ -2.03
SKP2	YNL311C	ECM34	P38728	170 aa		2.36	□□□□□ -2.03
SKP2	YNL311C	GET2	P40056	285 aa		2.36	□□□□□ -2.03
SKP2	YNL311C	SYF2	P53277	215 aa	Predicted RBP	2.36	□□□□□ -2.03
SKP2	YNL311C	AIM6	Q07716	390 aa		2.36	□□□□□ -2.03
SKP2	YNL311C	RHO2	P06781	192 aa		2.35	□□□□□ -2.03
SKP2	YNL311C	PHO85	P17157	305 aa		2.35	□□□□□ -2.03
SKP2	YNL311C	FEN2	P25621	512 aa	Known RBP	2.35	□□□□□ -2.03
SKP2	YNL311C	YGL114W	P53134	725 aa		2.35	□□□□□ -2.03
SKP2	YNL311C	HOT1	Q03213	719 aa		2.35	□□□□□ -2.03
SKP2	YNL311C	YDR102C	Q03864	110 aa		2.35	□□□□□ -2.03
SKP2	YNL311C	GSH2	Q08220	491 aa		2.35	□□□□□ -2.03
SKP2	YNL311C	APL4	Q12028	832 aa		2.35	□□□□□ -2.03
SKP2	YNL311C	YLR108C	Q12259	485 aa		2.35	□□□□□ -2.03
SKP2	YNL311C	MCT1	Q12283	360 aa		2.35	□□□□□ -2.03
SKP2	YNL311C	HMS1	Q12398	434 aa		2.35	□□□□□ -2.03
SKP2	YNL311C	DBP3	P20447	523 aa	Known RBP	2.35	□□□□□ -2.03

Retrieved 100 of 5,963 RNA–protein pairs in 97.7 ms