RNA–Protein interactions for RNA: YMR185W

RTP1, Transcript of Protein required for the nuclear import and biogenesis of RNA pol II, yeastyeast

Gene RTP1, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTP1YMR185W GEX1P25596 615 aa1.67□□□□□ -2.14
RTP1YMR185W TRR1P29509 319 aaKnown RBP1.67□□□□□ -2.14
RTP1YMR185W SFK1P35735 353 aa1.67□□□□□ -2.14
RTP1YMR185W KKQ8P36004 724 aa1.67□□□□□ -2.14
RTP1YMR185W TCD2P36101 447 aaKnown RBP1.67□□□□□ -2.14
RTP1YMR185W GEX2P36173 615 aa1.67□□□□□ -2.14
RTP1YMR185W PAU24P38155 120 aa1.67□□□□□ -2.14
RTP1YMR185W MOH1P38191 138 aa1.67□□□□□ -2.14
RTP1YMR185W ERV15P38312 142 aa1.67□□□□□ -2.14
RTP1YMR185W IMD2P38697 523 aaKnown RBP1.67□□□□□ -2.14
RTP1YMR185W HRB1P38922 454 aaKnown RBP RIP-Chip data1.67□□□□□ -2.14not detected
RTP1YMR185W FMP52P40008 231 aa1.67□□□□□ -2.14
RTP1YMR185W RFC4P40339 323 aaKnown RBP1.67□□□□□ -2.14
RTP1YMR185W TIR3P40552 269 aa1.67□□□□□ -2.14
RTP1YMR185W FAA4P47912 694 aaKnown RBP1.67□□□□□ -2.14
RTP1YMR185W SDT1P53078 280 aa1.67□□□□□ -2.14
RTP1YMR185W YGL204CP53089 101 aa1.67□□□□□ -2.14
RTP1YMR185W SYF2P53277 215 aaPredicted RBP1.67□□□□□ -2.14
RTP1YMR185W YNL034WP53963 612 aa1.67□□□□□ -2.14
RTP1YMR185W ASI3P53983 676 aa1.67□□□□□ -2.14
RTP1YMR185W LAP3Q01532 483 aaKnown RBP RIP-Chip data1.67□□□□□ -2.14not detected
RTP1YMR185W MEH1Q02205 184 aa1.67□□□□□ -2.14
RTP1YMR185W SNZ1Q03148 297 aa1.67□□□□□ -2.14
RTP1YMR185W SWF1Q04629 336 aa1.67□□□□□ -2.14
RTP1YMR185W NNT1Q05874 261 aa1.67□□□□□ -2.14
RTP1YMR185W NDD1Q08887 554 aa1.67□□□□□ -2.14
RTP1YMR185W LYS21Q12122 440 aaKnown RBP1.67□□□□□ -2.14
RTP1YMR185W VMA9Q3E7B6 73 aa1.67□□□□□ -2.14
RTP1YMR185W HBN1Q96VH4 193 aa1.67□□□□□ -2.14
RTP1YMR185W ISN1Q99312 450 aa1.67□□□□□ -2.14
RTP1YMR185W STE7P06784 515 aa1.66□□□□□ -2.14
RTP1YMR185W RPS21AP0C0V8 87 aaKnown RBP1.66□□□□□ -2.14
RTP1YMR185W PDA1P16387 420 aaKnown RBP1.66□□□□□ -2.14
RTP1YMR185W EPT1P22140 391 aa1.66□□□□□ -2.14
RTP1YMR185W CPR4P25334 318 aa1.66□□□□□ -2.14
RTP1YMR185W TRX3P25372 127 aa1.66□□□□□ -2.14
RTP1YMR185W RFA2P26754 273 aaKnown RBP1.66□□□□□ -2.14
RTP1YMR185W MRP17P28778 131 aa1.66□□□□□ -2.14
RTP1YMR185W MCM10P32354 571 aa1.66□□□□□ -2.14
RTP1YMR185W DCG1P32460 244 aa1.66□□□□□ -2.14
RTP1YMR185W YBL010CP32788 280 aa1.66□□□□□ -2.14
RTP1YMR185W UIP5P36137 443 aa1.66□□□□□ -2.14
RTP1YMR185W AVT5P38176 459 aa1.66□□□□□ -2.14
RTP1YMR185W HTD2P38790 280 aaKnown RBP1.66□□□□□ -2.14
RTP1YMR185W ARO9P38840 513 aaPredicted RBP1.66□□□□□ -2.14
RTP1YMR185W TIM17P39515 158 aa1.66□□□□□ -2.14
RTP1YMR185W SSO2P39926 295 aa1.66□□□□□ -2.14
RTP1YMR185W YEL073CP39974 107 aa1.66□□□□□ -2.14
RTP1YMR185W SMB1P40018 196 aaKnown RBP1.66□□□□□ -2.14
RTP1YMR185W MMF1P40185 145 aaKnown RBP1.66□□□□□ -2.14
RTP1YMR185W CGR1P53188 120 aa1.66□□□□□ -2.14
RTP1YMR185W OKP1P53298 406 aa1.66□□□□□ -2.14
RTP1YMR185W COQ6P53318 479 aa1.66□□□□□ -2.14
RTP1YMR185W NRK1P53915 240 aa1.66□□□□□ -2.14
RTP1YMR185W YPL113CQ02961 396 aa1.66□□□□□ -2.14
RTP1YMR185W YMR279CQ03263 540 aa1.66□□□□□ -2.14
RTP1YMR185W HLR1Q04429 423 aa1.66□□□□□ -2.14
RTP1YMR185W MDM30Q05930 598 aa1.66□□□□□ -2.14
RTP1YMR185W YLR225CQ05948 407 aaKnown RBP1.66□□□□□ -2.14
RTP1YMR185W UTP21Q06078 939 aaPredicted RBP1.66□□□□□ -2.14
RTP1YMR185W EAF1Q06337 982 aa1.66□□□□□ -2.14
RTP1YMR185W SKI7Q08491 747 aaPredicted RBP1.66□□□□□ -2.14
RTP1YMR185W YPR011CQ12251 326 aa1.66□□□□□ -2.14
RTP1YMR185W TPO4Q12256 659 aa1.66□□□□□ -2.14
RTP1YMR185W INP53Q12271 1107 aa1.66□□□□□ -2.14
RTP1YMR185W RRI1Q12468 440 aa1.66□□□□□ -2.14
RTP1YMR185W CDC9P04819 755 aa1.66□□□□□ -2.14
RTP1YMR185W LEU4P06208 619 aaKnown RBP1.66□□□□□ -2.14
RTP1YMR185W YOL162WP0CF19 215 aa1.66□□□□□ -2.14
RTP1YMR185W HOM3P10869 527 aa1.66□□□□□ -2.14
RTP1YMR185W ZWF1P11412 505 aaKnown RBP1.66□□□□□ -2.14
RTP1YMR185W ERD1P16151 362 aa1.66□□□□□ -2.14
RTP1YMR185W AAC3P18238 307 aa1.66□□□□□ -2.14
RTP1YMR185W RNA14P25298 677 aaKnown RBP1.66□□□□□ -2.14
RTP1YMR185W STE50P25344 346 aa1.66□□□□□ -2.14
RTP1YMR185W CWH43P25618 953 aa1.66□□□□□ -2.14
RTP1YMR185W YMC1P32331 307 aa1.66□□□□□ -2.14
RTP1YMR185W RNP1P32385 249 aa1.66□□□□□ -2.14
RTP1YMR185W SFP1P32432 683 aa1.66□□□□□ -2.14
RTP1YMR185W CPR5P35176 225 aa1.66□□□□□ -2.14
RTP1YMR185W BET3P36149 193 aa1.66□□□□□ -2.14
RTP1YMR185W DTR1P38125 572 aa1.66□□□□□ -2.14
RTP1YMR185W POP8P38208 133 aa1.66□□□□□ -2.14
RTP1YMR185W LAG1P38703 411 aa1.66□□□□□ -2.14
RTP1YMR185W PCL5P38794 229 aa1.66□□□□□ -2.14
RTP1YMR185W YHR097CP38809 366 aaKnown RBP1.66□□□□□ -2.14
RTP1YMR185W ASP1P38986 381 aaPredicted RBP1.66□□□□□ -2.14
RTP1YMR185W PRP39P39682 629 aaKnown RBP1.66□□□□□ -2.14
RTP1YMR185W GCV3P39726 170 aaPredicted RBP1.66□□□□□ -2.14
RTP1YMR185W RMD6P39975 231 aa1.66□□□□□ -2.14
RTP1YMR185W HEM14P40012 539 aa1.66□□□□□ -2.14
RTP1YMR185W LAS21P40367 830 aa1.66□□□□□ -2.14
RTP1YMR185W YIL161WP40449 235 aaKnown RBP1.66□□□□□ -2.14
RTP1YMR185W FMC1P40491 155 aa1.66□□□□□ -2.14
RTP1YMR185W MNT3P40549 630 aa1.66□□□□□ -2.14
RTP1YMR185W YFR020WP43600 232 aa1.66□□□□□ -2.14
RTP1YMR185W JAC1P53193 184 aa1.66□□□□□ -2.14
RTP1YMR185W SWC4P53201 476 aa1.66□□□□□ -2.14
RTP1YMR185W YGR250CP53316 781 aaKnown RBP1.66□□□□□ -2.14
RTP1YMR185W YCL001W-AP87012 153 aa1.66□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 63.5 ms