RNA–Protein interactions for RNA: YLR423C

ATG17, Transcript of Scaffold protein responsible for phagophore assembly site organization, yeastyeast

Gene ATG17, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG17YLR423C API2Q04413 109 aa5.1□□□□□ -1.59
ATG17YLR423C VIK1Q12045 647 aa5.1□□□□□ -1.59
ATG17YLR423C TFS1P14306 219 aa5.09□□□□□ -1.59
ATG17YLR423C HSP26P15992 214 aaKnown RBP RIP-Chip data5.09□□□□□ -1.59 RIP-Chip
ATG17YLR423C ALD5P40047 520 aaKnown RBP5.09□□□□□ -1.59
ATG17YLR423C YJL118WP47022 219 aa5.09□□□□□ -1.59
ATG17YLR423C SDS23P53172 527 aa5.09□□□□□ -1.59
ATG17YLR423C YNR066CP53752 436 aa5.09□□□□□ -1.59
ATG17YLR423C TPS1Q00764 495 aaKnown RBP5.09□□□□□ -1.59
ATG17YLR423C MIM1Q08176 113 aa5.09□□□□□ -1.59
ATG17YLR423C MET16P18408 261 aaPredicted RBP5.08□□□□□ -1.6
ATG17YLR423C IMP3P32899 183 aaPredicted RBP5.08□□□□□ -1.6
ATG17YLR423C YKL187CP34231 750 aa5.08□□□□□ -1.6
ATG17YLR423C ECM34P38728 170 aa5.08□□□□□ -1.6
ATG17YLR423C SPT8P38915 602 aa5.08□□□□□ -1.6
ATG17YLR423C YMR209CQ03648 457 aa5.08□□□□□ -1.6
ATG17YLR423C INP2Q03824 705 aa5.08□□□□□ -1.6
ATG17YLR423C COX20Q04935 205 aa5.08□□□□□ -1.6
ATG17YLR423C SPT4P32914 102 aaPredicted RBP5.07□□□□□ -1.6
ATG17YLR423C COY1P34237 679 aa5.07□□□□□ -1.6
ATG17YLR423C MRPL27P36526 146 aaPredicted RBP5.07□□□□□ -1.6
ATG17YLR423C RFT1P38206 574 aaPredicted RBP5.07□□□□□ -1.6
ATG17YLR423C SHE10P53075 577 aa5.07□□□□□ -1.6
ATG17YLR423C TAZ1Q06510 381 aa5.07□□□□□ -1.6
ATG17YLR423C MRP1P10662 321 aaKnown RBP5.06□□□□□ -1.6
ATG17YLR423C CYM1P32898 989 aa5.06□□□□□ -1.6
ATG17YLR423C RRT13P40042 185 aa5.06□□□□□ -1.6
ATG17YLR423C FMP48P53233 369 aa5.06□□□□□ -1.6
ATG17YLR423C LSB1P53281 241 aa5.06□□□□□ -1.6
ATG17YLR423C INP1Q03694 420 aa5.06□□□□□ -1.6
ATG17YLR423C PEX30Q06169 523 aa5.06□□□□□ -1.6
ATG17YLR423C YLR173WQ06247 608 aa5.06□□□□□ -1.6
ATG17YLR423C YOL029CQ08187 201 aa5.06□□□□□ -1.6
ATG17YLR423C CDC13P32797 924 aaKnown RBP5.05□□□□□ -1.6
ATG17YLR423C YOX1P34161 385 aa5.05□□□□□ -1.6
ATG17YLR423C SMP1P38128 452 aa5.05□□□□□ -1.6
ATG17YLR423C COA1P40452 197 aa5.05□□□□□ -1.6
ATG17YLR423C YPT32P51996 222 aaKnown RBP5.05□□□□□ -1.6
ATG17YLR423C UTP15Q04305 513 aaKnown RBP5.05□□□□□ -1.6
ATG17YLR423C DPP1Q05521 289 aa5.05□□□□□ -1.6
ATG17YLR423C MED4Q12343 284 aa5.05□□□□□ -1.6
ATG17YLR423C TIP20P33891 701 aa5.04□□□□□ -1.6
ATG17YLR423C TAD2P47058 250 aa5.04□□□□□ -1.6
ATG17YLR423C PGU1P47180 361 aa5.04□□□□□ -1.6
ATG17YLR423C VHS1Q03785 461 aa5.04□□□□□ -1.6
ATG17YLR423C VBA1Q04301 562 aa5.04□□□□□ -1.6
ATG17YLR423C CTS2Q06350 511 aa5.04□□□□□ -1.6
ATG17YLR423C YOR292CQ08743 309 aa5.04□□□□□ -1.6
ATG17YLR423C RAX2Q12465 1220 aa5.04□□□□□ -1.6
ATG17YLR423C CBP6P07253 162 aaPredicted RBP5.03□□□□□ -1.6
ATG17YLR423C MRPL6P32904 214 aa5.03□□□□□ -1.6
ATG17YLR423C RPT5P33297 434 aaKnown RBP5.03□□□□□ -1.6
ATG17YLR423C SDS24P38314 527 aa5.03□□□□□ -1.6
ATG17YLR423C LIA1P47120 325 aaKnown RBP5.03□□□□□ -1.6
ATG17YLR423C NUP84P52891 726 aa5.03□□□□□ -1.6
ATG17YLR423C SEC13Q04491 297 aaKnown RBP5.03□□□□□ -1.6
ATG17YLR423C PER33Q12144 273 aa5.03□□□□□ -1.6
ATG17YLR423C HIS1P00498 297 aaKnown RBP5.02□□□□□ -1.61
ATG17YLR423C CSE1P33307 960 aa5.02□□□□□ -1.61
ATG17YLR423C BNA6P43619 295 aa5.02□□□□□ -1.61
ATG17YLR423C YNL134CP53912 376 aaKnown RBP5.02□□□□□ -1.61
ATG17YLR423C ALG11P53954 548 aaKnown RBP5.02□□□□□ -1.61
ATG17YLR423C ADH6Q04894 360 aaKnown RBP5.02□□□□□ -1.61
ATG17YLR423C YPL278CQ08990 100 aa5.02□□□□□ -1.61
ATG17YLR423C YDR018CQ12185 396 aa5.02□□□□□ -1.61
ATG17YLR423C COX2P00410 251 aa5.01□□□□□ -1.61
ATG17YLR423C POL30P15873 258 aaKnown RBP5.01□□□□□ -1.61
ATG17YLR423C DAL82P21705 255 aa5.01□□□□□ -1.61
ATG17YLR423C GPX1P36014 167 aa5.01□□□□□ -1.61
ATG17YLR423C PRM9P39551 298 aa5.01□□□□□ -1.61
ATG17YLR423C VAB2P40003 282 aa5.01□□□□□ -1.61
ATG17YLR423C PEX31P53203 462 aa5.01□□□□□ -1.61
ATG17YLR423C GIS2P53849 153 aaKnown RBP RIP-Chip data5.01□□□□□ -1.61not detected
ATG17YLR423C YMR244WQ04018 355 aa5.01□□□□□ -1.61
ATG17YLR423C TSA2Q04120 196 aa5.01□□□□□ -1.61
ATG17YLR423C TAF9Q05027 157 aa5.01□□□□□ -1.61
ATG17YLR423C YAL067W-AQ8TGK6 75 aa5.01□□□□□ -1.61
ATG17YLR423C SUA5P32579 426 aa5□□□□□ -1.61
ATG17YLR423C YBR062CP38239 180 aa5□□□□□ -1.61
ATG17YLR423C HSM3P38348 480 aa5□□□□□ -1.61
ATG17YLR423C AGX1P43567 385 aa5□□□□□ -1.61
ATG17YLR423C COG7P53195 279 aa5□□□□□ -1.61
ATG17YLR423C OST6Q03723 332 aa5□□□□□ -1.61
ATG17YLR423C SFH1Q06168 426 aa5□□□□□ -1.61
ATG17YLR423C CTR3Q06686 241 aa5□□□□□ -1.61
ATG17YLR423C YOR114WQ12219 294 aa5□□□□□ -1.61
ATG17YLR423C RAD3P06839 778 aa4.99□□□□□ -1.61
ATG17YLR423C YHR045WP38775 560 aa4.99□□□□□ -1.61
ATG17YLR423C YIL054WP40524 105 aa4.99□□□□□ -1.61
ATG17YLR423C ARC18Q05933 178 aaKnown RBP4.99□□□□□ -1.61
ATG17YLR423C BSC6Q08280 497 aa4.99□□□□□ -1.61
ATG17YLR423C FLO11P08640 1367 aa4.99□□□□□ -1.61
ATG17YLR423C ADH1P00330 348 aaKnown RBP4.98□□□□□ -1.61
ATG17YLR423C MSF1P08425 469 aa4.98□□□□□ -1.61
ATG17YLR423C DAL81P21657 970 aa4.98□□□□□ -1.61
ATG17YLR423C RRT12P25381 491 aa4.98□□□□□ -1.61
ATG17YLR423C POF1P25576 258 aa4.98□□□□□ -1.61
ATG17YLR423C AEP1P32493 518 aa4.98□□□□□ -1.61
ATG17YLR423C ZRT3P34240 503 aa4.98□□□□□ -1.61
ATG17YLR423C DDI1P40087 428 aa4.98□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 69.9 ms