RNA–Protein interactions for RNA: YLR399C

BDF1, Transcript of Protein involved in transcription initiation, yeastyeast

Gene BDF1, Length 2,061 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BDF1YLR399C YGR161W-CQ3E744 92 aa11.38□□□□□ -0.59
BDF1YLR399C AFT1P22149 690 aa11.37□□□□□ -0.59
BDF1YLR399C BOS1P25385 244 aa11.37□□□□□ -0.59
BDF1YLR399C MSK1P32048 576 aa11.37□□□□□ -0.59
BDF1YLR399C AVT5P38176 459 aa11.37□□□□□ -0.59
BDF1YLR399C SLI15P38283 698 aa11.37□□□□□ -0.59
BDF1YLR399C SDP1P40479 209 aa11.37□□□□□ -0.59
BDF1YLR399C NIT2P47016 307 aa11.37□□□□□ -0.59
BDF1YLR399C YJR149WP47177 404 aa11.37□□□□□ -0.59
BDF1YLR399C NUP57P48837 541 aa11.37□□□□□ -0.59
BDF1YLR399C YOR352WQ08816 343 aa11.37□□□□□ -0.59
BDF1YLR399C TFC7Q12415 435 aa11.37□□□□□ -0.59
BDF1YLR399C HOM2P13663 365 aaKnown RBP11.37□□□□□ -0.59
BDF1YLR399C RSC6P25632 483 aa11.37□□□□□ -0.59
BDF1YLR399C PCL5P38794 229 aa11.37□□□□□ -0.59
BDF1YLR399C AZF1P41696 914 aa11.37□□□□□ -0.59
BDF1YLR399C RHO4Q00246 291 aa11.37□□□□□ -0.59
BDF1YLR399C YLR225CQ05948 407 aaKnown RBP11.37□□□□□ -0.59
BDF1YLR399C NOC4Q06512 552 aaPredicted RBP11.37□□□□□ -0.59
BDF1YLR399C PUS9Q12069 462 aa11.37□□□□□ -0.59
BDF1YLR399C TIM23P32897 222 aa11.36□□□□□ -0.59
BDF1YLR399C SCO2P38072 301 aa11.36□□□□□ -0.59
BDF1YLR399C BAT2P47176 376 aaKnown RBP11.36□□□□□ -0.59
BDF1YLR399C COG7P53195 279 aa11.36□□□□□ -0.59
BDF1YLR399C YGR042WP53227 271 aa11.36□□□□□ -0.59
BDF1YLR399C MAP1Q01662 387 aaKnown RBP RIP-Chip data11.36□□□□□ -0.59not detected
BDF1YLR399C MSC1Q03104 513 aa11.36□□□□□ -0.59
BDF1YLR399C PML1Q07930 204 aaPredicted RBP11.36□□□□□ -0.59
BDF1YLR399C SDO1Q07953 250 aaKnown RBP11.36□□□□□ -0.59
BDF1YLR399C LPX1Q12405 387 aaKnown RBP11.36□□□□□ -0.59
BDF1YLR399C APA1P16550 321 aaKnown RBP11.36□□□□□ -0.59
BDF1YLR399C POF1P25576 258 aa11.36□□□□□ -0.59
BDF1YLR399C YCR100CP25606 316 aa11.36□□□□□ -0.59
BDF1YLR399C GUT1P32190 709 aa11.36□□□□□ -0.59
BDF1YLR399C ASH1P34233 588 aa11.36□□□□□ -0.59
BDF1YLR399C DCW1P36091 449 aa11.36□□□□□ -0.59
BDF1YLR399C LYS12P40495 371 aaKnown RBP11.36□□□□□ -0.59
BDF1YLR399C EMC5P40540 141 aa11.36□□□□□ -0.59
BDF1YLR399C BIO5P53744 561 aaKnown RBP11.36□□□□□ -0.59
BDF1YLR399C YOL163WP0CF20 169 aa11.35□□□□□ -0.59
BDF1YLR399C COS9P36034 407 aa11.35□□□□□ -0.59
BDF1YLR399C SDH4P37298 181 aa11.35□□□□□ -0.59
BDF1YLR399C BSD2P38356 321 aa11.35□□□□□ -0.59
BDF1YLR399C COS12P53053 380 aa11.35□□□□□ -0.59
BDF1YLR399C GLO4Q12320 285 aa11.35□□□□□ -0.59
BDF1YLR399C YCL001W-BQ96VH2 84 aa11.35□□□□□ -0.59
BDF1YLR399C MRPL44P19956 98 aa11.34□□□□□ -0.59
BDF1YLR399C UFE1P41834 346 aa11.34□□□□□ -0.59
BDF1YLR399C SWC4P53201 476 aa11.34□□□□□ -0.59
BDF1YLR399C GPI15P53961 229 aa11.34□□□□□ -0.59
BDF1YLR399C HAS1Q03532 505 aaKnown RBP11.34□□□□□ -0.59
BDF1YLR399C YPR109WQ06104 294 aa11.34□□□□□ -0.59
BDF1YLR399C THI73Q07904 523 aa11.34□□□□□ -0.59
BDF1YLR399C HMS1Q12398 434 aa11.34□□□□□ -0.59
BDF1YLR399C YKL033W-AQ86ZR7 236 aa11.34□□□□□ -0.59
BDF1YLR399C YLR422WQ06409 1932 aa11.34□□□□□ -0.59
BDF1YLR399C MRP1P10662 321 aaKnown RBP11.34□□□□□ -0.59
BDF1YLR399C ERG24P32462 438 aaKnown RBP11.34□□□□□ -0.59
BDF1YLR399C PEX32P38292 413 aa11.34□□□□□ -0.59
BDF1YLR399C YOL162WP0CF19 215 aa11.33□□□□□ -0.6
BDF1YLR399C SEC12P11655 471 aa11.33□□□□□ -0.6
BDF1YLR399C YPK2P18961 677 aa11.33□□□□□ -0.6
BDF1YLR399C YBR013CP38215 129 aa11.33□□□□□ -0.6
BDF1YLR399C SOL1P50278 321 aa11.33□□□□□ -0.6
BDF1YLR399C YNR062CP53748 327 aa11.33□□□□□ -0.6
BDF1YLR399C PEX30Q06169 523 aa11.33□□□□□ -0.6
BDF1YLR399C YPD1Q07688 167 aa11.33□□□□□ -0.6
BDF1YLR399C RPS31P05759 152 aaKnown RBP11.32□□□□□ -0.6
BDF1YLR399C CDC7P06243 507 aa11.32□□□□□ -0.6
BDF1YLR399C UBI4P0CG63 381 aaKnown RBP11.32□□□□□ -0.6
BDF1YLR399C RPL40AP0CH08 128 aaKnown RBP11.32□□□□□ -0.6
BDF1YLR399C RPL40BP0CH09 128 aaKnown RBP11.32□□□□□ -0.6
BDF1YLR399C CNE1P27825 502 aa11.32□□□□□ -0.6
BDF1YLR399C GLN1P32288 370 aaKnown RBP11.32□□□□□ -0.6
BDF1YLR399C MNT3P40549 630 aa11.32□□□□□ -0.6
BDF1YLR399C TYW3P53177 273 aa11.32□□□□□ -0.6
BDF1YLR399C LEA1Q08963 238 aaPredicted RBP11.32□□□□□ -0.6
BDF1YLR399C YML003WP0CF16 290 aa11.32□□□□□ -0.6
BDF1YLR399C AFR1P33304 620 aa11.32□□□□□ -0.6
BDF1YLR399C OCA5P38738 679 aa11.32□□□□□ -0.6
BDF1YLR399C PUG1P40100 303 aa11.32□□□□□ -0.6
BDF1YLR399C YMR265CQ03508 461 aaKnown RBP11.32□□□□□ -0.6
BDF1YLR399C SMA2Q04658 369 aa11.32□□□□□ -0.6
BDF1YLR399C BER1Q06688 274 aaKnown RBP11.32□□□□□ -0.6
BDF1YLR399C BRX1Q08235 291 aaKnown RBP11.32□□□□□ -0.6
BDF1YLR399C YOR387CQ08910 206 aa11.32□□□□□ -0.6
BDF1YLR399C TYW1Q08960 810 aaKnown RBP11.32□□□□□ -0.6
BDF1YLR399C TPO4Q12256 659 aa11.32□□□□□ -0.6
BDF1YLR399C TFB5Q3E7C1 72 aaPredicted RBP11.32□□□□□ -0.6
BDF1YLR399C ERG4P25340 473 aa11.31□□□□□ -0.6
BDF1YLR399C PUT3P25502 979 aaPredicted RBP11.31□□□□□ -0.6
BDF1YLR399C PFA3P42836 336 aa11.31□□□□□ -0.6
BDF1YLR399C LYS20P48570 428 aaKnown RBP11.31□□□□□ -0.6
BDF1YLR399C HOF1Q05080 669 aa11.31□□□□□ -0.6
BDF1YLR399C NDJ1Q12366 352 aa11.31□□□□□ -0.6
BDF1YLR399C TDH2P00358 332 aaKnown RBP11.31□□□□□ -0.6
BDF1YLR399C HAP2P06774 265 aa11.31□□□□□ -0.6
BDF1YLR399C MMF1P40185 145 aaKnown RBP11.31□□□□□ -0.6
BDF1YLR399C PMT6P42934 759 aa11.31□□□□□ -0.6
BDF1YLR399C YOR338WQ99326 363 aa11.31□□□□□ -0.6
Retrieved 100 of 5,963 RNA–protein pairs in 47.7 ms