RNA–Protein interactions for RNA: YLR260W

LCB5, Transcript of Minor sphingoid long-chain base kinase, yeastyeast

Gene LCB5, Length 2,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB5YLR260W AIM3P38266 947 aaKnown RBP3.28□□□□□ -1.89
LCB5YLR260W TSC10P38342 320 aa3.28□□□□□ -1.89
LCB5YLR260W YHI9P38765 294 aa3.28□□□□□ -1.89
LCB5YLR260W RPP1P38786 293 aa3.28□□□□□ -1.89
LCB5YLR260W FRT2P39734 528 aa3.28□□□□□ -1.89
LCB5YLR260W YKE4P40544 346 aa3.28□□□□□ -1.89
LCB5YLR260W CFD1P40558 293 aa3.28□□□□□ -1.89
LCB5YLR260W YIP3P53633 176 aa3.28□□□□□ -1.89
LCB5YLR260W AAT1Q01802 451 aa3.28□□□□□ -1.89
LCB5YLR260W CTF19Q02732 369 aa3.28□□□□□ -1.89
LCB5YLR260W PEX12Q04370 399 aa3.28□□□□□ -1.89
LCB5YLR260W YDL242WQ07746 117 aa3.28□□□□□ -1.89
LCB5YLR260W YOL073CQ08232 322 aa3.28□□□□□ -1.89
LCB5YLR260W IMA2Q08295 589 aa3.28□□□□□ -1.89
LCB5YLR260W YKL183C-AQ3E765 70 aa3.28□□□□□ -1.89
LCB5YLR260W QCR7P00128 127 aa3.27□□□□□ -1.89
LCB5YLR260W HTB1P02293 131 aaKnown RBP3.27□□□□□ -1.89
LCB5YLR260W HTB2P02294 131 aa3.27□□□□□ -1.89
LCB5YLR260W RPP2AP05319 106 aaKnown RBP3.27□□□□□ -1.89
LCB5YLR260W SSC1P0CS90 654 aaKnown RBP3.27□□□□□ -1.89
LCB5YLR260W RPO26P20435 155 aa3.27□□□□□ -1.89
LCB5YLR260W AMD2P22580 549 aa3.27□□□□□ -1.89
LCB5YLR260W PUT3P25502 979 aaPredicted RBP3.27□□□□□ -1.89
LCB5YLR260W MGT1P26188 188 aa3.27□□□□□ -1.89
LCB5YLR260W UTP11P34247 250 aaPredicted RBP3.27□□□□□ -1.89
LCB5YLR260W SOR1P35497 357 aaKnown RBP3.27□□□□□ -1.89
LCB5YLR260W INM1P38710 295 aa3.27□□□□□ -1.89
LCB5YLR260W DBP8P38719 431 aa3.27□□□□□ -1.89
LCB5YLR260W CIN4P39110 191 aa3.27□□□□□ -1.89
LCB5YLR260W COA1P40452 197 aa3.27□□□□□ -1.89
LCB5YLR260W CHA4P43634 648 aa3.27□□□□□ -1.89
LCB5YLR260W MDV1P47025 714 aa3.27□□□□□ -1.89
LCB5YLR260W YJR056CP47115 236 aa3.27□□□□□ -1.89
LCB5YLR260W YGR168CP53293 376 aa3.27□□□□□ -1.89
LCB5YLR260W MPS1P54199 764 aa3.27□□□□□ -1.89
LCB5YLR260W YDC1Q02896 317 aa3.27□□□□□ -1.89
LCB5YLR260W KRE28Q04431 385 aa3.27□□□□□ -1.89
LCB5YLR260W ADH6Q04894 360 aaKnown RBP3.27□□□□□ -1.89
LCB5YLR260W SOR2Q07786 357 aa3.27□□□□□ -1.89
LCB5YLR260W YOR289WQ12012 251 aaPredicted RBP3.27□□□□□ -1.89
LCB5YLR260W YKL068W-AQ3E826 78 aa3.27□□□□□ -1.89
LCB5YLR260W FSH3Q99369 266 aa3.27□□□□□ -1.89
LCB5YLR260W IRA1P18963 3092 aa3.27□□□□□ -1.89
LCB5YLR260W ATP10P18496 279 aa3.26□□□□□ -1.89
LCB5YLR260W YMR31P19955 123 aa3.26□□□□□ -1.89
LCB5YLR260W SCL1P21243 252 aaKnown RBP3.26□□□□□ -1.89
LCB5YLR260W NAM9P27929 486 aa3.26□□□□□ -1.89
LCB5YLR260W CCT2P39076 527 aaKnown RBP3.26□□□□□ -1.89
LCB5YLR260W YEL073CP39974 107 aa3.26□□□□□ -1.89
LCB5YLR260W GIM4P40005 111 aaKnown RBP3.26□□□□□ -1.89
LCB5YLR260W YNL320WP42840 284 aa3.26□□□□□ -1.89
LCB5YLR260W AGP3P43548 558 aa3.26□□□□□ -1.89
LCB5YLR260W GAT1P43574 510 aa3.26□□□□□ -1.89
LCB5YLR260W RPC17P47076 161 aa3.26□□□□□ -1.89
LCB5YLR260W NRG1Q03125 231 aa3.26□□□□□ -1.89
LCB5YLR260W GIS1Q03833 894 aa3.26□□□□□ -1.89
LCB5YLR260W YDL114WQ07530 308 aa3.26□□□□□ -1.89
LCB5YLR260W IZH3Q07959 543 aa3.26□□□□□ -1.89
LCB5YLR260W PLB3Q08108 686 aa3.26□□□□□ -1.89
LCB5YLR260W SIA1Q12212 622 aa3.26□□□□□ -1.89
LCB5YLR260W RNH203Q12338 110 aa3.26□□□□□ -1.89
LCB5YLR260W QCR2P07257 368 aa3.26□□□□□ -1.89
LCB5YLR260W YBR121C-AP0C5L4 52 aa3.26□□□□□ -1.89
LCB5YLR260W CNA1P23287 553 aa3.26□□□□□ -1.89
LCB5YLR260W YCR099CP25657 155 aa3.26□□□□□ -1.89
LCB5YLR260W LAC1P28496 418 aa3.26□□□□□ -1.89
LCB5YLR260W PRP21P32524 280 aaPredicted RBP3.26□□□□□ -1.89
LCB5YLR260W YOX1P34161 385 aa3.26□□□□□ -1.89
LCB5YLR260W YKL063CP35725 167 aa3.26□□□□□ -1.89
LCB5YLR260W SRP102P36057 244 aaPredicted RBP3.26□□□□□ -1.89
LCB5YLR260W CCT4P39078 528 aaKnown RBP3.26□□□□□ -1.89
LCB5YLR260W ALG8P40351 577 aa3.26□□□□□ -1.89
LCB5YLR260W POG1P40473 351 aa3.26□□□□□ -1.89
LCB5YLR260W QRI1P43123 477 aaKnown RBP3.26□□□□□ -1.89
LCB5YLR260W GET1P53192 235 aa3.26□□□□□ -1.89
LCB5YLR260W ZRG17P53735 605 aa3.26□□□□□ -1.89
LCB5YLR260W RMI1Q02685 241 aa3.26□□□□□ -1.89
LCB5YLR260W TRM12Q04235 462 aa3.26□□□□□ -1.89
LCB5YLR260W BNA5Q05979 453 aa3.26□□□□□ -1.89
LCB5YLR260W YPR147CQ06522 304 aaKnown RBP3.26□□□□□ -1.89
LCB5YLR260W FRE7Q12333 620 aa3.26□□□□□ -1.89
LCB5YLR260W TRM13Q12383 476 aa3.26□□□□□ -1.89
LCB5YLR260W SNF8Q12483 233 aa3.26□□□□□ -1.89
LCB5YLR260W YDR157WA0A023PZE8 133 aa3.25□□□□□ -1.89
LCB5YLR260W OPI3P05375 206 aa3.25□□□□□ -1.89
LCB5YLR260W NSP1P14907 823 aaKnown RBP3.25□□□□□ -1.89
LCB5YLR260W CYS4P32582 507 aaKnown RBP3.25□□□□□ -1.89
LCB5YLR260W MRP21P38175 177 aa3.25□□□□□ -1.89
LCB5YLR260W POP4P38336 279 aa3.25□□□□□ -1.89
LCB5YLR260W ANS1P38832 159 aa3.25□□□□□ -1.89
LCB5YLR260W YAL037WP39728 267 aa3.25□□□□□ -1.89
LCB5YLR260W SOK1P40317 901 aa3.25□□□□□ -1.89
LCB5YLR260W SLM1P40485 686 aa3.25□□□□□ -1.89
LCB5YLR260W YGR210CP42942 411 aa3.25□□□□□ -1.89
LCB5YLR260W IRC7P43623 340 aa3.25□□□□□ -1.89
LCB5YLR260W COX16P47081 118 aa3.25□□□□□ -1.89
LCB5YLR260W TIS11P47977 285 aa3.25□□□□□ -1.89
LCB5YLR260W PMT5P52867 743 aa3.25□□□□□ -1.89
LCB5YLR260W ERG26P53199 349 aaKnown RBP3.25□□□□□ -1.89
LCB5YLR260W BIO4P53630 237 aa3.25□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms