RNA–Protein interactions for RNA: YJL197W

UBP12, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP12, Length 3,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP12YJL197W WWM1P43582 211 aaKnown RBP3.3□□□□□ -1.88
UBP12YJL197W CTK3P46963 296 aaPredicted RBP3.3□□□□□ -1.88
UBP12YJL197W AIM23P47015 356 aa3.3□□□□□ -1.88
UBP12YJL197W VEL1P53058 206 aa3.3□□□□□ -1.88
UBP12YJL197W PIR3Q03180 325 aa3.3□□□□□ -1.88
UBP12YJL197W EBS1Q03466 884 aaKnown RBP3.3□□□□□ -1.88
UBP12YJL197W HCR1Q05775 265 aaKnown RBP3.3□□□□□ -1.88
UBP12YJL197W GPM2Q12008 311 aa3.3□□□□□ -1.88
UBP12YJL197W SAL1D6W196 494 aa3.3□□□□□ -1.88
UBP12YJL197W AIM17P23180 465 aaKnown RBP3.3□□□□□ -1.88
UBP12YJL197W IFM1P25038 676 aa3.3□□□□□ -1.88
UBP12YJL197W YBR137WP38276 179 aa3.3□□□□□ -1.88
UBP12YJL197W YAT2P40017 923 aa3.3□□□□□ -1.88
UBP12YJL197W SMB1P40018 196 aaKnown RBP3.3□□□□□ -1.88
UBP12YJL197W YJR141WP47172 347 aaPredicted RBP3.3□□□□□ -1.88
UBP12YJL197W VHT1P53241 593 aa3.3□□□□□ -1.88
UBP12YJL197W MAL13P53338 473 aa3.3□□□□□ -1.88
UBP12YJL197W SSU72P53538 206 aaPredicted RBP3.3□□□□□ -1.88
UBP12YJL197W SKI8Q02793 397 aaPredicted RBP3.3□□□□□ -1.88
UBP12YJL197W RNY1Q02933 434 aaKnown RBP3.3□□□□□ -1.88
UBP12YJL197W YMR010WQ03687 405 aa3.3□□□□□ -1.88
UBP12YJL197W TRM82Q03774 444 aa3.3□□□□□ -1.88
UBP12YJL197W RRP17Q04031 235 aaPredicted RBP3.3□□□□□ -1.88
UBP12YJL197W MRX9Q07349 420 aaKnown RBP3.3□□□□□ -1.88
UBP12YJL197W YET3Q07451 203 aa3.3□□□□□ -1.88
UBP12YJL197W VIK1Q12045 647 aa3.3□□□□□ -1.88
UBP12YJL197W SLM3Q12093 417 aa3.3□□□□□ -1.88
UBP12YJL197W SNU23Q12368 194 aaPredicted RBP3.3□□□□□ -1.88
UBP12YJL197W RFA3P26755 122 aaKnown RBP3.3□□□□□ -1.88
UBP12YJL197W SPS19P32573 292 aaKnown RBP3.3□□□□□ -1.88
UBP12YJL197W AVT1P47082 602 aa3.3□□□□□ -1.88
UBP12YJL197W IBA57P47158 497 aa3.3□□□□□ -1.88
UBP12YJL197W YGR067CP53243 804 aa3.3□□□□□ -1.88
UBP12YJL197W YLR281CQ05863 155 aa3.3□□□□□ -1.88
UBP12YJL197W YLR446WQ06204 433 aa3.3□□□□□ -1.88
UBP12YJL197W OSW1Q08692 278 aa3.3□□□□□ -1.88
UBP12YJL197W RSA1Q08932 381 aa3.3□□□□□ -1.88
UBP12YJL197W YDL109CQ12103 647 aa3.3□□□□□ -1.88
UBP12YJL197W EAF3Q12432 401 aa3.3□□□□□ -1.88
UBP12YJL197W HEM4P06174 275 aa3.29□□□□□ -1.88
UBP12YJL197W YCR022CP25620 114 aa3.29□□□□□ -1.88
UBP12YJL197W FUN26P31381 517 aa3.29□□□□□ -1.88
UBP12YJL197W MAM33P40513 266 aa3.29□□□□□ -1.88
UBP12YJL197W TMA22P47089 198 aaPredicted RBP3.29□□□□□ -1.88
UBP12YJL197W YDR415CQ04033 374 aaPredicted RBP3.29□□□□□ -1.88
UBP12YJL197W GLT1Q12680 2145 aaKnown RBP3.29□□□□□ -1.88
UBP12YJL197W FBA1P14540 359 aaKnown RBP3.29□□□□□ -1.88
UBP12YJL197W GLN3P18494 730 aa3.29□□□□□ -1.88
UBP12YJL197W UBC6P33296 250 aaPredicted RBP3.29□□□□□ -1.88
UBP12YJL197W NDT80P38830 627 aa3.29□□□□□ -1.88
UBP12YJL197W MTC6P38849 526 aa3.29□□□□□ -1.88
UBP12YJL197W NBP1P52919 319 aaPredicted RBP3.29□□□□□ -1.88
UBP12YJL197W YMR114CQ04471 368 aaKnown RBP3.29□□□□□ -1.88
UBP12YJL197W TAF9Q05027 157 aa3.29□□□□□ -1.88
UBP12YJL197W SWR1Q05471 1514 aa3.29□□□□□ -1.88
UBP12YJL197W YER190C-BP0CX94 160 aa3.29□□□□□ -1.88
UBP12YJL197W YEL077W-AP0CX95 160 aa3.29□□□□□ -1.88
UBP12YJL197W YGR296C-BP0CX96 160 aa3.29□□□□□ -1.88
UBP12YJL197W YPL283W-BP0CX97 160 aa3.29□□□□□ -1.88
UBP12YJL197W YPR204C-AP0CX98 160 aa3.29□□□□□ -1.88
UBP12YJL197W CBS2P14905 389 aa3.29□□□□□ -1.88
UBP12YJL197W YAP1P19880 650 aaKnown RBP3.29□□□□□ -1.88
UBP12YJL197W CPR3P25719 182 aa3.29□□□□□ -1.88
UBP12YJL197W QRI5P32344 111 aa3.29□□□□□ -1.88
UBP12YJL197W SPT4P32914 102 aaPredicted RBP3.29□□□□□ -1.88
UBP12YJL197W KTI12P34253 313 aaKnown RBP3.29□□□□□ -1.88
UBP12YJL197W FZO1P38297 855 aa3.29□□□□□ -1.88
UBP12YJL197W YPC1P38298 316 aa3.29□□□□□ -1.88
UBP12YJL197W CIN2P46670 268 aa3.29□□□□□ -1.88
UBP12YJL197W ASI3P53983 676 aa3.29□□□□□ -1.88
UBP12YJL197W FRE8Q12209 686 aa3.29□□□□□ -1.88
UBP12YJL197W JLP1Q12358 412 aa3.29□□□□□ -1.88
UBP12YJL197W YDR157WA0A023PZE8 133 aa3.28□□□□□ -1.88
UBP12YJL197W ERD1P16151 362 aa3.28□□□□□ -1.88
UBP12YJL197W YBP1P38315 674 aa3.28□□□□□ -1.88
UBP12YJL197W YIL029CP40538 142 aa3.28□□□□□ -1.88
UBP12YJL197W CDH1P53197 566 aa3.28□□□□□ -1.88
UBP12YJL197W YNL095CP53932 642 aa3.28□□□□□ -1.88
UBP12YJL197W PEX10Q05568 337 aa3.28□□□□□ -1.88
UBP12YJL197W DSE3Q08729 430 aa3.28□□□□□ -1.88
UBP12YJL197W RPP0P05317 312 aaKnown RBP3.28□□□□□ -1.88
UBP12YJL197W RPL23AP0CX41 137 aaKnown RBP3.28□□□□□ -1.88
UBP12YJL197W RPL23BP0CX42 137 aaKnown RBP3.28□□□□□ -1.88
UBP12YJL197W VPH2P32341 215 aa3.28□□□□□ -1.88
UBP12YJL197W PMU1P36069 295 aa3.28□□□□□ -1.88
UBP12YJL197W YKL075CP36083 450 aa3.28□□□□□ -1.88
UBP12YJL197W POG1P40473 351 aa3.28□□□□□ -1.88
UBP12YJL197W YNL040WP53960 456 aaPredicted RBP3.28□□□□□ -1.88
UBP12YJL197W RPL15BP54780 204 aaPredicted RBP3.28□□□□□ -1.88
UBP12YJL197W ERP1Q05359 219 aaKnown RBP3.28□□□□□ -1.88
UBP12YJL197W SEC10Q06245 871 aa3.28□□□□□ -1.88
UBP12YJL197W SPT3P06844 337 aa3.28□□□□□ -1.88
UBP12YJL197W MDM10P18409 493 aa3.28□□□□□ -1.88
UBP12YJL197W RNA14P25298 677 aaKnown RBP3.28□□□□□ -1.88
UBP12YJL197W INO2P26798 304 aa3.28□□□□□ -1.88
UBP12YJL197W ALK2P32789 676 aaPredicted RBP3.28□□□□□ -1.88
UBP12YJL197W OST1P41543 476 aaKnown RBP3.28□□□□□ -1.88
UBP12YJL197W ESA1Q08649 445 aa3.28□□□□□ -1.88
UBP12YJL197W STH1P32597 1359 aa3.28□□□□□ -1.89
UBP12YJL197W MTM1P53320 366 aa3.27□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 59 ms