RNA–Protein interactions for RNA: YIR009W

MSL1, Transcript of U2B component of U2 snRNP, yeastyeast

Gene MSL1, Length 336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSL1YIR009W PET117Q02771 107 aa1.8□□□□□ -2.12
MSL1YIR009W OST6Q03723 332 aa1.8□□□□□ -2.12
MSL1YIR009W INP2Q03824 705 aa1.8□□□□□ -2.12
MSL1YIR009W LIP2Q06005 328 aa1.8□□□□□ -2.12
MSL1YIR009W GMC2Q06201 188 aa1.8□□□□□ -2.12
MSL1YIR009W YDL114WQ07530 308 aa1.8□□□□□ -2.12
MSL1YIR009W RLP24Q07915 199 aaKnown RBP1.8□□□□□ -2.12
MSL1YIR009W ALE1Q08548 619 aa1.8□□□□□ -2.12
MSL1YIR009W TAF10Q12030 206 aa1.8□□□□□ -2.12
MSL1YIR009W SLM3Q12093 417 aa1.8□□□□□ -2.12
MSL1YIR009W YOR029WQ12243 111 aa1.8□□□□□ -2.12
MSL1YIR009W RRP42Q12277 265 aaPredicted RBP1.8□□□□□ -2.12
MSL1YIR009W NAG1Q8TGN9 163 aa1.8□□□□□ -2.12
MSL1YIR009W BUD3P25558 1636 aa1.8□□□□□ -2.12
MSL1YIR009W RAD3P06839 778 aa1.79□□□□□ -2.12
MSL1YIR009W PRB1P09232 635 aa1.79□□□□□ -2.12
MSL1YIR009W RPL31AP0C2H8 113 aaKnown RBP1.79□□□□□ -2.12
MSL1YIR009W HSP26P15992 214 aaKnown RBP RIP-Chip data1.79□□□□□ -2.12not detected
MSL1YIR009W MET16P18408 261 aaPredicted RBP1.79□□□□□ -2.12
MSL1YIR009W MIR1P23641 311 aaKnown RBP1.79□□□□□ -2.12
MSL1YIR009W YCR016WP25617 290 aaKnown RBP1.79□□□□□ -2.12
MSL1YIR009W NTG1P31378 399 aa1.79□□□□□ -2.12
MSL1YIR009W ARO4P32449 370 aaKnown RBP1.79□□□□□ -2.12
MSL1YIR009W SUA5P32579 426 aa1.79□□□□□ -2.12
MSL1YIR009W GCG1P32656 232 aaKnown RBP1.79□□□□□ -2.12
MSL1YIR009W YBR241CP38142 488 aa1.79□□□□□ -2.12
MSL1YIR009W TAE1P38340 232 aa1.79□□□□□ -2.12
MSL1YIR009W BIG1P38813 335 aa1.79□□□□□ -2.12
MSL1YIR009W PET100P38958 111 aa1.79□□□□□ -2.12
MSL1YIR009W COA1P40452 197 aa1.79□□□□□ -2.12
MSL1YIR009W ATG18P43601 500 aa1.79□□□□□ -2.12
MSL1YIR009W BNS1P50084 137 aa1.79□□□□□ -2.12
MSL1YIR009W KAP114P53067 1004 aa1.79□□□□□ -2.12
MSL1YIR009W CDH1P53197 566 aa1.79□□□□□ -2.12
MSL1YIR009W TIM21P53220 239 aa1.79□□□□□ -2.12
MSL1YIR009W CLD1P53264 445 aa1.79□□□□□ -2.12
MSL1YIR009W NRM1P53718 249 aa1.79□□□□□ -2.12
MSL1YIR009W SUR7P54003 302 aa1.79□□□□□ -2.12
MSL1YIR009W YPL077CQ02831 240 aa1.79□□□□□ -2.12
MSL1YIR009W TAZ1Q06510 381 aa1.79□□□□□ -2.12
MSL1YIR009W RDL2Q08742 149 aaKnown RBP1.79□□□□□ -2.12
MSL1YIR009W ATP16Q12165 160 aa1.79□□□□□ -2.12
MSL1YIR009W RUD3Q12234 484 aaKnown RBP1.79□□□□□ -2.12
MSL1YIR009W SNT2P53127 1403 aa1.79□□□□□ -2.12
MSL1YIR009W STU1P38198 1513 aa1.79□□□□□ -2.12
MSL1YIR009W ULS1Q08562 1619 aa1.79□□□□□ -2.12
MSL1YIR009W TOM1Q03280 3268 aa1.79□□□□□ -2.12
MSL1YIR009W PDR5P33302 1511 aaKnown RBP1.78□□□□□ -2.12
MSL1YIR009W HIS1P00498 297 aaKnown RBP1.78□□□□□ -2.12
MSL1YIR009W ARG80P07249 177 aa1.78□□□□□ -2.12
MSL1YIR009W MSF1P08425 469 aa1.78□□□□□ -2.12
MSL1YIR009W MRPL20P22354 195 aaPredicted RBP1.78□□□□□ -2.12
MSL1YIR009W CMK2P22517 447 aa1.78□□□□□ -2.12
MSL1YIR009W URA10P30402 227 aa1.78□□□□□ -2.12
MSL1YIR009W NUP2P32499 720 aa1.78□□□□□ -2.12
MSL1YIR009W DOA4P32571 926 aa1.78□□□□□ -2.12
MSL1YIR009W SPT4P32914 102 aaPredicted RBP1.78□□□□□ -2.12
MSL1YIR009W MID2P36027 376 aa1.78□□□□□ -2.12
MSL1YIR009W RPC37P36121 282 aa1.78□□□□□ -2.12
MSL1YIR009W PET8P38921 284 aa1.78□□□□□ -2.12
MSL1YIR009W BFR1P38934 470 aaKnown RBP RIP-Chip data1.78□□□□□ -2.12not detected
MSL1YIR009W PRM9P39551 298 aa1.78□□□□□ -2.12
MSL1YIR009W RTR1P40084 226 aaPredicted RBP1.78□□□□□ -2.12
MSL1YIR009W SHQ1P40486 507 aaPredicted RBP1.78□□□□□ -2.12
MSL1YIR009W STB1P42845 420 aa1.78□□□□□ -2.12
MSL1YIR009W HIT1P46973 164 aa1.78□□□□□ -2.12
MSL1YIR009W SWC4P53201 476 aa1.78□□□□□ -2.12
MSL1YIR009W SLT2Q00772 484 aa1.78□□□□□ -2.12
MSL1YIR009W CWC21Q03375 135 aaKnown RBP1.78□□□□□ -2.12
MSL1YIR009W YDR115WQ04598 105 aa1.78□□□□□ -2.12
MSL1YIR009W ADH6Q04894 360 aaKnown RBP1.78□□□□□ -2.12
MSL1YIR009W IRC25Q07951 179 aa1.78□□□□□ -2.12
MSL1YIR009W YOR376WQ08900 122 aa1.78□□□□□ -2.12
MSL1YIR009W GIS3Q12418 502 aa1.78□□□□□ -2.12
MSL1YIR009W IML1P47170 1584 aa1.77□□□□□ -2.13
MSL1YIR009W SRB8P25648 1427 aa1.77□□□□□ -2.13
MSL1YIR009W SSN2P38931 1420 aa1.77□□□□□ -2.13
MSL1YIR009W COX2P00410 251 aa1.77□□□□□ -2.13
MSL1YIR009W ATP6P00854 259 aa1.77□□□□□ -2.13
MSL1YIR009W MATALPHA1P0CY06 175 aa1.77□□□□□ -2.13
MSL1YIR009W HMLALPHA1P0CY07 175 aa1.77□□□□□ -2.13
MSL1YIR009W TFS1P14306 219 aa1.77□□□□□ -2.13
MSL1YIR009W DAL82P21705 255 aa1.77□□□□□ -2.13
MSL1YIR009W GIT1P25346 518 aa1.77□□□□□ -2.13
MSL1YIR009W LDS1P31379 325 aa1.77□□□□□ -2.13
MSL1YIR009W SRB4P32569 687 aa1.77□□□□□ -2.13
MSL1YIR009W BMH2P34730 273 aaKnown RBP1.77□□□□□ -2.13
MSL1YIR009W TIM17P39515 158 aa1.77□□□□□ -2.13
MSL1YIR009W SOP4P39543 234 aaPredicted RBP1.77□□□□□ -2.13
MSL1YIR009W PTI1P39927 425 aaPredicted RBP1.77□□□□□ -2.13
MSL1YIR009W MIG3P39943 394 aa1.77□□□□□ -2.13
MSL1YIR009W AIM10P39965 576 aaKnown RBP1.77□□□□□ -2.13
MSL1YIR009W GDS1P41913 522 aa1.77□□□□□ -2.13
MSL1YIR009W PMT4P46971 762 aa1.77□□□□□ -2.13
MSL1YIR009W TAD2P47058 250 aa1.77□□□□□ -2.13
MSL1YIR009W NBP1P52919 319 aaPredicted RBP1.77□□□□□ -2.13
MSL1YIR009W PEX31P53203 462 aa1.77□□□□□ -2.13
MSL1YIR009W YDR209CQ03480 137 aa1.77□□□□□ -2.13
MSL1YIR009W ENT5Q03769 411 aaKnown RBP1.77□□□□□ -2.13
MSL1YIR009W VBA1Q04301 562 aa1.77□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 91.9 ms