RNA–Protein interactions for RNA: YIR006C

PAN1, Transcript of Part of actin cytoskeleton-regulatory complex Pan1p-Sla1p-End3p, yeastyeast

Gene PAN1, Length 4,443 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PAN1YIR006C GPX1P36014 167 aa4.34□□□□□ -1.71
PAN1YIR006C RTC3P38804 111 aaPredicted RBP4.34□□□□□ -1.71
PAN1YIR006C TRR2P38816 342 aa4.34□□□□□ -1.71
PAN1YIR006C SHO1P40073 367 aa4.34□□□□□ -1.71
PAN1YIR006C OSW5P40219 148 aa4.34□□□□□ -1.71
PAN1YIR006C MNT3P40549 630 aa4.34□□□□□ -1.71
PAN1YIR006C LEE1Q02799 301 aaKnown RBP4.34□□□□□ -1.71
PAN1YIR006C TPP1Q03796 238 aa4.34□□□□□ -1.71
PAN1YIR006C ROY1Q04847 553 aa4.34□□□□□ -1.71
PAN1YIR006C DXO1Q06349 442 aa4.34□□□□□ -1.71
PAN1YIR006C FRE5Q08908 694 aa4.34□□□□□ -1.71
PAN1YIR006C YOR387CQ08910 206 aa4.34□□□□□ -1.71
PAN1YIR006C YPL066WQ12194 479 aa4.34□□□□□ -1.71
PAN1YIR006C PRP46Q12417 451 aaPredicted RBP4.34□□□□□ -1.71
PAN1YIR006C RTN2Q12443 393 aa4.34□□□□□ -1.71
PAN1YIR006C PRE2P30656 287 aaKnown RBP4.34□□□□□ -1.71
PAN1YIR006C MRT4P33201 236 aaKnown RBP4.34□□□□□ -1.71
PAN1YIR006C AIM46P38885 310 aa4.34□□□□□ -1.71
PAN1YIR006C SNG1P46950 547 aa4.34□□□□□ -1.71
PAN1YIR006C LSM8P47093 109 aaKnown RBP4.34□□□□□ -1.71
PAN1YIR006C CAF40P53829 373 aa4.34□□□□□ -1.71
PAN1YIR006C YDR132CQ03900 495 aa4.34□□□□□ -1.71
PAN1YIR006C MTQ2Q03920 221 aaPredicted RBP4.34□□□□□ -1.71
PAN1YIR006C TSA2Q04120 196 aa4.34□□□□□ -1.71
PAN1YIR006C FIT1Q04433 528 aa4.34□□□□□ -1.71
PAN1YIR006C RNH202Q05635 350 aa4.34□□□□□ -1.71
PAN1YIR006C YLR173WQ06247 608 aa4.34□□□□□ -1.71
PAN1YIR006C MMT2Q08970 484 aa4.34□□□□□ -1.71
PAN1YIR006C LEU9Q12166 604 aaKnown RBP4.34□□□□□ -1.71
PAN1YIR006C YDR262WQ12331 272 aa4.34□□□□□ -1.71
PAN1YIR006C CDC9P04819 755 aa4.34□□□□□ -1.72
PAN1YIR006C PBS2P08018 668 aa4.34□□□□□ -1.72
PAN1YIR006C PET54P10834 293 aa4.34□□□□□ -1.72
PAN1YIR006C REV1P12689 985 aa4.34□□□□□ -1.72
PAN1YIR006C MRPL4P36517 319 aa4.34□□□□□ -1.72
PAN1YIR006C TIS11P47977 285 aa4.34□□□□□ -1.72
PAN1YIR006C YGR079WP53249 370 aa4.34□□□□□ -1.72
PAN1YIR006C PLM2Q04383 521 aa4.34□□□□□ -1.72
PAN1YIR006C WIP1Q2V2P8 89 aa4.34□□□□□ -1.72
PAN1YIR006C YGR161W-CQ3E744 92 aa4.34□□□□□ -1.72
PAN1YIR006C FKS1P38631 1876 aaKnown RBP4.34□□□□□ -1.72
PAN1YIR006C FLO1P32768 1537 aa4.33□□□□□ -1.72
PAN1YIR006C IPP1P00817 287 aaKnown RBP4.33□□□□□ -1.72
PAN1YIR006C PRB1P09232 635 aa4.33□□□□□ -1.72
PAN1YIR006C MOT2P34909 587 aaKnown RBP4.33□□□□□ -1.72
PAN1YIR006C YKL151CP36059 337 aa4.33□□□□□ -1.72
PAN1YIR006C TAT1P38085 619 aa4.33□□□□□ -1.72
PAN1YIR006C YJL043WP47053 257 aa4.33□□□□□ -1.72
PAN1YIR006C BUL1P48524 976 aa4.33□□□□□ -1.72
PAN1YIR006C NPY1P53164 384 aa4.33□□□□□ -1.72
PAN1YIR006C SYF2P53277 215 aaPredicted RBP4.33□□□□□ -1.72
PAN1YIR006C ATG21Q02887 496 aa4.33□□□□□ -1.72
PAN1YIR006C PNG1Q02890 363 aa4.33□□□□□ -1.72
PAN1YIR006C YMR252CQ04814 134 aa4.33□□□□□ -1.72
PAN1YIR006C HOF1Q05080 669 aa4.33□□□□□ -1.72
PAN1YIR006C ARO10Q06408 635 aa4.33□□□□□ -1.72
PAN1YIR006C XYL2Q07993 356 aa4.33□□□□□ -1.72
PAN1YIR006C BRX1Q08235 291 aaKnown RBP4.33□□□□□ -1.72
PAN1YIR006C CMC2Q3E7A4 109 aa4.33□□□□□ -1.72
PAN1YIR006C URA3P03962 267 aa4.33□□□□□ -1.72
PAN1YIR006C RPL17AP05740 184 aaKnown RBP4.33□□□□□ -1.72
PAN1YIR006C RPS31P05759 152 aaKnown RBP4.33□□□□□ -1.72
PAN1YIR006C DFR1P07807 211 aaKnown RBP RIP-Chip data4.33□□□□□ -1.72not detected
PAN1YIR006C UBI4P0CG63 381 aaKnown RBP4.33□□□□□ -1.72
PAN1YIR006C RPL40AP0CH08 128 aaKnown RBP4.33□□□□□ -1.72
PAN1YIR006C RPL40BP0CH09 128 aaKnown RBP4.33□□□□□ -1.72
PAN1YIR006C URA6P15700 204 aa4.33□□□□□ -1.72
PAN1YIR006C FUR1P18562 216 aaKnown RBP4.33□□□□□ -1.72
PAN1YIR006C YPK2P18961 677 aa4.33□□□□□ -1.72
PAN1YIR006C RFA3P26755 122 aaKnown RBP4.33□□□□□ -1.72
PAN1YIR006C PPA2P28239 310 aa4.33□□□□□ -1.72
PAN1YIR006C MKK1P32490 508 aa4.33□□□□□ -1.72
PAN1YIR006C STE14P32584 239 aa4.33□□□□□ -1.72
PAN1YIR006C THI80P35202 319 aa4.33□□□□□ -1.72
PAN1YIR006C YOR062CP36025 268 aa4.33□□□□□ -1.72
PAN1YIR006C YEL057CP39983 233 aa4.33□□□□□ -1.72
PAN1YIR006C FLC3P53121 802 aa4.33□□□□□ -1.72
PAN1YIR006C POP6P53218 158 aa4.33□□□□□ -1.72
PAN1YIR006C YPD1Q07688 167 aa4.33□□□□□ -1.72
PAN1YIR006C NDD1Q08887 554 aa4.33□□□□□ -1.72
PAN1YIR006C RPL25P04456 142 aaKnown RBP4.33□□□□□ -1.72
PAN1YIR006C ARF1P11076 181 aaKnown RBP4.33□□□□□ -1.72
PAN1YIR006C AGP1P25376 633 aa4.33□□□□□ -1.72
PAN1YIR006C TRR1P29509 319 aaKnown RBP4.33□□□□□ -1.72
PAN1YIR006C ACP1P32463 125 aa4.33□□□□□ -1.72
PAN1YIR006C AUR1P36107 401 aaPredicted RBP4.33□□□□□ -1.72
PAN1YIR006C GLY1P37303 387 aaKnown RBP4.33□□□□□ -1.72
PAN1YIR006C ACT1P60010 375 aaKnown RBP4.33□□□□□ -1.72
PAN1YIR006C RVB1Q03940 463 aaKnown RBP4.33□□□□□ -1.72
PAN1YIR006C YDL177CQ12257 170 aa4.33□□□□□ -1.72
PAN1YIR006C YRM1Q12340 786 aa4.33□□□□□ -1.72
PAN1YIR006C TFC7Q12415 435 aa4.33□□□□□ -1.72
PAN1YIR006C MSB2P32334 1306 aa4.33□□□□□ -1.72
PAN1YIR006C RPC40P07703 335 aaKnown RBP4.32□□□□□ -1.72
PAN1YIR006C YSF3P0C074 85 aaPredicted RBP4.32□□□□□ -1.72
PAN1YIR006C YCP4P25349 247 aaKnown RBP4.32□□□□□ -1.72
PAN1YIR006C DAD2P36162 133 aa4.32□□□□□ -1.72
PAN1YIR006C ECM31P38122 312 aa4.32□□□□□ -1.72
PAN1YIR006C STP2P38704 541 aa4.32□□□□□ -1.72
PAN1YIR006C ELO1P39540 310 aa4.32□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 38.4 ms