RNA–Protein interactions for RNA: YGR075C

PRP38, Transcript of Unique component of the U4/U6.U5 tri-snRNP particle, yeastyeast

Gene PRP38, Length 729 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP38YGR075C PNC1P53184 216 aaKnown RBP2.12□□□□□ -2.07
PRP38YGR075C YMR111CQ04461 462 aaPredicted RBP2.12□□□□□ -2.07
PRP38YGR075C APC4Q04601 652 aa2.12□□□□□ -2.07
PRP38YGR075C APC9Q12107 265 aa2.12□□□□□ -2.07
PRP38YGR075C YDR018CQ12185 396 aa2.12□□□□□ -2.07
PRP38YGR075C SIA1Q12212 622 aa2.12□□□□□ -2.07
PRP38YGR075C RPO31P04051 1460 aa2.12□□□□□ -2.07
PRP38YGR075C MHP1P43638 1398 aa2.11□□□□□ -2.07
PRP38YGR075C RPC40P07703 335 aaKnown RBP2.11□□□□□ -2.07
PRP38YGR075C YKL187CP34231 750 aa2.11□□□□□ -2.07
PRP38YGR075C MCH2P36032 473 aa2.11□□□□□ -2.07
PRP38YGR075C SDH4P37298 181 aa2.11□□□□□ -2.07
PRP38YGR075C SOP4P39543 234 aaPredicted RBP2.11□□□□□ -2.07
PRP38YGR075C DSE1P40077 573 aa2.11□□□□□ -2.07
PRP38YGR075C MEP1P40260 492 aa2.11□□□□□ -2.07
PRP38YGR075C SDS23P53172 527 aa2.11□□□□□ -2.07
PRP38YGR075C NRM1P53718 249 aa2.11□□□□□ -2.07
PRP38YGR075C SNX41Q04053 625 aa2.11□□□□□ -2.07
PRP38YGR075C YLR413WQ06689 675 aa2.11□□□□□ -2.07
PRP38YGR075C GEA2P39993 1459 aaKnown RBP2.11□□□□□ -2.07
PRP38YGR075C RAD7P06779 565 aa2.1□□□□□ -2.07
PRP38YGR075C GAL7P08431 366 aa2.1□□□□□ -2.07
PRP38YGR075C HPR1P17629 752 aaKnown RBP2.1□□□□□ -2.07
PRP38YGR075C GPI12P23797 304 aa2.1□□□□□ -2.07
PRP38YGR075C MEK1P24719 497 aaPredicted RBP2.1□□□□□ -2.07
PRP38YGR075C TAE1P38340 232 aa2.1□□□□□ -2.07
PRP38YGR075C YMR262WP38430 313 aa2.1□□□□□ -2.07
PRP38YGR075C CTM1P38818 585 aa2.1□□□□□ -2.07
PRP38YGR075C GTO1P48239 356 aa2.1□□□□□ -2.07
PRP38YGR075C YGL185CP53100 379 aa2.1□□□□□ -2.07
PRP38YGR075C YGR266WP53326 701 aa2.1□□□□□ -2.07
PRP38YGR075C YNL260CP53846 198 aa2.1□□□□□ -2.07
PRP38YGR075C SMD1Q02260 146 aaPredicted RBP2.1□□□□□ -2.07
PRP38YGR075C BCP1Q06338 283 aa2.1□□□□□ -2.07
PRP38YGR075C PBP4Q07362 185 aaKnown RBP2.1□□□□□ -2.07
PRP38YGR075C MIM1Q08176 113 aa2.1□□□□□ -2.07
PRP38YGR075C UTP23Q12339 254 aaKnown RBP2.1□□□□□ -2.07
PRP38YGR075C MRPL23Q12487 163 aaPredicted RBP2.1□□□□□ -2.07
PRP38YGR075C IZH4Q99393 312 aa2.1□□□□□ -2.07
PRP38YGR075C YOR093CQ12275 1648 aa2.09□□□□□ -2.07
PRP38YGR075C ATP6P00854 259 aa2.09□□□□□ -2.07
PRP38YGR075C CUP2P15315 225 aa2.09□□□□□ -2.07
PRP38YGR075C DAL5P15365 543 aa2.09□□□□□ -2.07
PRP38YGR075C PPQ1P32945 549 aa2.09□□□□□ -2.07
PRP38YGR075C YKL070WP36087 169 aa2.09□□□□□ -2.07
PRP38YGR075C SWD2P36104 329 aaPredicted RBP2.09□□□□□ -2.07
PRP38YGR075C PEX18P38855 283 aa2.09□□□□□ -2.07
PRP38YGR075C PET8P38921 284 aa2.09□□□□□ -2.07
PRP38YGR075C RTT105P40063 208 aa2.09□□□□□ -2.07
PRP38YGR075C RRG9P40156 214 aa2.09□□□□□ -2.07
PRP38YGR075C SLM1P40485 686 aa2.09□□□□□ -2.07
PRP38YGR075C MPP10P47083 593 aaKnown RBP2.09□□□□□ -2.07
PRP38YGR075C UBC13P52490 153 aa2.09□□□□□ -2.07
PRP38YGR075C SWC4P53201 476 aa2.09□□□□□ -2.07
PRP38YGR075C YPL245WQ12179 454 aaKnown RBP2.09□□□□□ -2.07
PRP38YGR075C ESC1Q03661 1658 aaKnown RBP2.09□□□□□ -2.08
PRP38YGR075C RPL31AP0C2H8 113 aaKnown RBP2.08□□□□□ -2.08
PRP38YGR075C FRS2P15625 503 aaKnown RBP2.08□□□□□ -2.08
PRP38YGR075C ERD1P16151 362 aa2.08□□□□□ -2.08
PRP38YGR075C OM45P16547 393 aa2.08□□□□□ -2.08
PRP38YGR075C RPL16BP26785 198 aaKnown RBP2.08□□□□□ -2.08
PRP38YGR075C RFT1P38206 574 aaPredicted RBP2.08□□□□□ -2.08
PRP38YGR075C YPC1P38298 316 aa2.08□□□□□ -2.08
PRP38YGR075C GDS1P41913 522 aa2.08□□□□□ -2.08
PRP38YGR075C KEL2P50090 882 aa2.08□□□□□ -2.08
PRP38YGR075C MND1P53102 219 aa2.08□□□□□ -2.08
PRP38YGR075C YNR066CP53752 436 aa2.08□□□□□ -2.08
PRP38YGR075C YNL050CP53952 270 aa2.08□□□□□ -2.08
PRP38YGR075C YPL077CQ02831 240 aa2.08□□□□□ -2.08
PRP38YGR075C YLR446WQ06204 433 aa2.08□□□□□ -2.08
PRP38YGR075C BER1Q06688 274 aaKnown RBP2.08□□□□□ -2.08
PRP38YGR075C RRP36Q12481 300 aaPredicted RBP2.08□□□□□ -2.08
PRP38YGR075C FMP16Q12497 93 aa2.08□□□□□ -2.08
PRP38YGR075C SPT6P23615 1451 aaKnown RBP2.07□□□□□ -2.08
PRP38YGR075C DNF2Q12675 1612 aa2.07□□□□□ -2.08
PRP38YGR075C TDH3P00359 332 aaKnown RBP RIP-Chip data2.07□□□□□ -2.08not detected
PRP38YGR075C SSA3P09435 649 aaKnown RBP2.07□□□□□ -2.08
PRP38YGR075C CPT1P17898 393 aa2.07□□□□□ -2.08
PRP38YGR075C MRPL20P22354 195 aaPredicted RBP2.07□□□□□ -2.08
PRP38YGR075C IFM1P25038 676 aa2.07□□□□□ -2.08
PRP38YGR075C INO2P26798 304 aa2.07□□□□□ -2.08
PRP38YGR075C UTR5P32630 166 aa2.07□□□□□ -2.08
PRP38YGR075C RIB7P33312 244 aa2.07□□□□□ -2.08
PRP38YGR075C RPC37P36121 282 aa2.07□□□□□ -2.08
PRP38YGR075C HIS2P38635 335 aa2.07□□□□□ -2.08
PRP38YGR075C AGP3P43548 558 aa2.07□□□□□ -2.08
PRP38YGR075C MIC19P43594 170 aa2.07□□□□□ -2.08
PRP38YGR075C HIT1P46973 164 aa2.07□□□□□ -2.08
PRP38YGR075C GMC1Q04399 608 aa2.07□□□□□ -2.08
PRP38YGR075C TRM10Q12400 293 aa2.07□□□□□ -2.08
PRP38YGR075C PRP46Q12417 451 aaPredicted RBP2.07□□□□□ -2.08
PRP38YGR075C DFM1Q12743 341 aaKnown RBP2.07□□□□□ -2.08
PRP38YGR075C LAG2Q92325 660 aa2.07□□□□□ -2.08
PRP38YGR075C HSL1P34244 1518 aa2.07□□□□□ -2.08
PRP38YGR075C SSK2P53599 1579 aa2.06□□□□□ -2.08
PRP38YGR075C CSM1P25651 190 aa2.06□□□□□ -2.08
PRP38YGR075C IMP3P32899 183 aaPredicted RBP2.06□□□□□ -2.08
PRP38YGR075C GPX1P36014 167 aa2.06□□□□□ -2.08
PRP38YGR075C SHQ1P40486 507 aaPredicted RBP2.06□□□□□ -2.08
PRP38YGR075C FMP33P46998 180 aa2.06□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 66.7 ms