RNA–Protein interactions for RNA: YGR009C

SEC9, Transcript of t-SNARE protein required for secretory vesicle-plasma membrane fusion, yeastyeast

Gene SEC9, Length 1,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC9YGR009C MOB1P40484 314 aa4.51□□□□□ -1.69
SEC9YGR009C MIC19P43594 170 aa4.51□□□□□ -1.69
SEC9YGR009C MSB3P48566 633 aaPredicted RBP4.51□□□□□ -1.69
SEC9YGR009C YNR071CP53757 342 aa4.51□□□□□ -1.69
SEC9YGR009C YPL014WQ02606 381 aa4.51□□□□□ -1.69
SEC9YGR009C CTL1Q03220 320 aaKnown RBP4.51□□□□□ -1.69
SEC9YGR009C YMR315WQ04869 349 aaKnown RBP4.51□□□□□ -1.69
SEC9YGR009C EST2Q06163 884 aa4.51□□□□□ -1.69
SEC9YGR009C HNT3Q08702 217 aa4.51□□□□□ -1.69
SEC9YGR009C YLR050CQ12155 161 aaKnown RBP4.51□□□□□ -1.69
SEC9YGR009C YDR018CQ12185 396 aa4.51□□□□□ -1.69
SEC9YGR009C SAL1D6W196 494 aa4.51□□□□□ -1.69
SEC9YGR009C RPS18AP0CX55 146 aaKnown RBP4.51□□□□□ -1.69
SEC9YGR009C RPS18BP0CX56 146 aaPredicted RBP4.51□□□□□ -1.69
SEC9YGR009C CDC50P25656 391 aa4.51□□□□□ -1.69
SEC9YGR009C FUB1P25659 250 aa4.51□□□□□ -1.69
SEC9YGR009C MSS51P32335 436 aa4.51□□□□□ -1.69
SEC9YGR009C MRP49P32388 137 aa4.51□□□□□ -1.69
SEC9YGR009C EXO5P38289 585 aa4.51□□□□□ -1.69
SEC9YGR009C SAF1P38352 637 aa4.51□□□□□ -1.69
SEC9YGR009C GTS1P40956 396 aa4.51□□□□□ -1.69
SEC9YGR009C PYK2P52489 506 aaKnown RBP4.51□□□□□ -1.69
SEC9YGR009C COS10P52924 374 aa4.51□□□□□ -1.69
SEC9YGR009C MGA1P53050 456 aa4.51□□□□□ -1.69
SEC9YGR009C ARO8P53090 500 aaKnown RBP4.51□□□□□ -1.69
SEC9YGR009C ROG1P53118 685 aa4.51□□□□□ -1.69
SEC9YGR009C MPA43P53583 542 aaPredicted RBP4.51□□□□□ -1.69
SEC9YGR009C RSM23Q01163 450 aa4.51□□□□□ -1.69
SEC9YGR009C SMP3Q04174 516 aa4.51□□□□□ -1.69
SEC9YGR009C TY1A-MR1Q04215 440 aa4.51□□□□□ -1.69
SEC9YGR009C CRD1Q07560 283 aa4.51□□□□□ -1.69
SEC9YGR009C ATP14Q12349 124 aa4.51□□□□□ -1.69
SEC9YGR009C IZH4Q99393 312 aa4.51□□□□□ -1.69
SEC9YGR009C BI3Q9ZZW7 517 aa4.51□□□□□ -1.69
SEC9YGR009C GAL80P04387 435 aa4.5□□□□□ -1.69
SEC9YGR009C MAG1P22134 296 aaKnown RBP4.5□□□□□ -1.69
SEC9YGR009C YSP3P25036 478 aa4.5□□□□□ -1.69
SEC9YGR009C PRY2P36110 329 aa4.5□□□□□ -1.69
SEC9YGR009C ROT2P38138 954 aa4.5□□□□□ -1.69
SEC9YGR009C MTC4P38335 694 aaKnown RBP4.5□□□□□ -1.69
SEC9YGR009C ARP1P38696 384 aa4.5□□□□□ -1.69
SEC9YGR009C VHS2P40463 436 aa4.5□□□□□ -1.69
SEC9YGR009C NSE4P43124 402 aa4.5□□□□□ -1.69
SEC9YGR009C HXT16P47185 567 aa4.5□□□□□ -1.69
SEC9YGR009C ASN2P49090 572 aaKnown RBP4.5□□□□□ -1.69
SEC9YGR009C PEX31P53203 462 aa4.5□□□□□ -1.69
SEC9YGR009C IBD2P53892 351 aa4.5□□□□□ -1.69
SEC9YGR009C IDP3P53982 420 aaKnown RBP4.5□□□□□ -1.69
SEC9YGR009C ATG21Q02887 496 aa4.5□□□□□ -1.69
SEC9YGR009C IZH3Q07959 543 aa4.5□□□□□ -1.69
SEC9YGR009C PLB3Q08108 686 aa4.5□□□□□ -1.69
SEC9YGR009C TY1A-BRQ12217 440 aa4.5□□□□□ -1.69
SEC9YGR009C THO2P53552 1597 aaKnown RBP4.49□□□□□ -1.69
SEC9YGR009C IRC20Q06554 1556 aa4.49□□□□□ -1.69
SEC9YGR009C RPL18AP0CX49 186 aaKnown RBP4.49□□□□□ -1.69
SEC9YGR009C RPL18BP0CX50 186 aaKnown RBP4.49□□□□□ -1.69
SEC9YGR009C VMA3P25515 160 aa4.49□□□□□ -1.69
SEC9YGR009C YKL075CP36083 450 aa4.49□□□□□ -1.69
SEC9YGR009C TFA2P36145 328 aa4.49□□□□□ -1.69
SEC9YGR009C BAT1P38891 393 aaKnown RBP4.49□□□□□ -1.69
SEC9YGR009C COS12P53053 380 aa4.49□□□□□ -1.69
SEC9YGR009C MTC3P53077 123 aa4.49□□□□□ -1.69
SEC9YGR009C GTR2P53290 341 aa4.49□□□□□ -1.69
SEC9YGR009C DAD3P69850 94 aa4.49□□□□□ -1.69
SEC9YGR009C SEI1Q06058 285 aa4.49□□□□□ -1.69
SEC9YGR009C GAS2Q06135 555 aa4.49□□□□□ -1.69
SEC9YGR009C MRI1Q06489 411 aaKnown RBP4.49□□□□□ -1.69
SEC9YGR009C MEU1Q07938 337 aaKnown RBP RIP-Chip data4.49□□□□□ -1.69not detected
SEC9YGR009C NUS1Q12063 375 aa4.49□□□□□ -1.69
SEC9YGR009C HRP1Q99383 534 aaKnown RBP4.49□□□□□ -1.69
SEC9YGR009C SSK2P53599 1579 aa4.49□□□□□ -1.69
SEC9YGR009C CAR1P00812 333 aaKnown RBP4.49□□□□□ -1.69
SEC9YGR009C GPM1P00950 247 aaKnown RBP4.49□□□□□ -1.69
SEC9YGR009C EPT1P22140 391 aa4.49□□□□□ -1.69
SEC9YGR009C URK1P27515 501 aa4.49□□□□□ -1.69
SEC9YGR009C YNK1P36010 153 aaKnown RBP4.49□□□□□ -1.69
SEC9YGR009C MRPL49P40858 161 aaPredicted RBP4.49□□□□□ -1.69
SEC9YGR009C YDL186WP48568 277 aa4.49□□□□□ -1.69
SEC9YGR009C MTL1P53214 551 aa4.49□□□□□ -1.69
SEC9YGR009C BUD9P53226 547 aa4.49□□□□□ -1.69
SEC9YGR009C GTF1P53260 183 aaPredicted RBP4.49□□□□□ -1.69
SEC9YGR009C SMX3P54999 86 aaPredicted RBP4.49□□□□□ -1.69
SEC9YGR009C SCS7Q03529 384 aa4.49□□□□□ -1.69
SEC9YGR009C YML037CQ03703 340 aa4.49□□□□□ -1.69
SEC9YGR009C CGI121Q03705 181 aaKnown RBP4.49□□□□□ -1.69
SEC9YGR009C RPC11Q04307 110 aaPredicted RBP4.49□□□□□ -1.69
SEC9YGR009C BUD20Q08004 166 aaPredicted RBP4.49□□□□□ -1.69
SEC9YGR009C TY2B-LR1P0C2J3 1770 aa4.48□□□□□ -1.69
SEC9YGR009C TY2B-FP0CX63 1770 aa4.48□□□□□ -1.69
SEC9YGR009C TY2B-GR2P0CX64 1770 aa4.48□□□□□ -1.69
SEC9YGR009C TY2B-CP25384 1770 aa4.48□□□□□ -1.69
SEC9YGR009C TY2B-DR2Q03494 1770 aa4.48□□□□□ -1.69
SEC9YGR009C TY1B-DR1Q03855 1755 aa4.48□□□□□ -1.69
SEC9YGR009C TY2B-DR3Q07791 1770 aaKnown RBP4.48□□□□□ -1.69
SEC9YGR009C TY2B-OR1Q12113 1770 aa4.48□□□□□ -1.69
SEC9YGR009C TY2B-DR1Q12472 1770 aa4.48□□□□□ -1.69
SEC9YGR009C TY2B-BQ12491 1770 aa4.48□□□□□ -1.69
SEC9YGR009C TY2B-OR2Q12501 1770 aa4.48□□□□□ -1.69
SEC9YGR009C TY1B-DR3Q99231 1755 aa4.48□□□□□ -1.69
SEC9YGR009C VAR1P02381 398 aa4.48□□□□□ -1.69
Retrieved 100 of 5,963 RNA–protein pairs in 28.9 ms