RNA–Protein interactions for RNA: YGL248W

PDE1, Transcript of Low-affinity cyclic AMP phosphodiesterase, yeast

Gene PDE1, Length 1,110 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PDE1	YGL248W	CDC28	P00546	298 aa	Known RBP	4.81	□□□□□ -1.64
PDE1	YGL248W	YCR101C	P25607	182 aa		4.81	□□□□□ -1.64
PDE1	YGL248W	BUD23	P25627	275 aa	Predicted RBP	4.81	□□□□□ -1.64
PDE1	YGL248W	MUD1	P32605	298 aa	Known RBP	4.81	□□□□□ -1.64
PDE1	YGL248W	RAD5	P32849	1169 aa	Predicted RBP	4.81	□□□□□ -1.64
PDE1	YGL248W	YPT53	P36019	220 aa		4.81	□□□□□ -1.64
PDE1	YGL248W	JEN1	P36035	616 aa		4.81	□□□□□ -1.64
PDE1	YGL248W	YCR087C-A	P37263	153 aa		4.81	□□□□□ -1.64
PDE1	YGL248W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	4.81	□□□□□ -1.64	not detected
PDE1	YGL248W	GOS1	P38736	223 aa		4.81	□□□□□ -1.64
PDE1	YGL248W	ANS1	P38832	159 aa		4.81	□□□□□ -1.64
PDE1	YGL248W	YAL037W	P39728	267 aa		4.81	□□□□□ -1.64
PDE1	YGL248W	TIS11	P47977	285 aa		4.81	□□□□□ -1.64
PDE1	YGL248W	YNL095C	P53932	642 aa		4.81	□□□□□ -1.64
PDE1	YGL248W	ARL3	Q02804	198 aa		4.81	□□□□□ -1.64
PDE1	YGL248W	MAK3	Q03503	176 aa		4.81	□□□□□ -1.64
PDE1	YGL248W	HER2	Q03557	464 aa		4.81	□□□□□ -1.64
PDE1	YGL248W	SNT309	Q06091	175 aa	Predicted RBP	4.81	□□□□□ -1.64
PDE1	YGL248W	FRQ1	Q06389	190 aa		4.81	□□□□□ -1.64
PDE1	YGL248W	CTR3	Q06686	241 aa		4.81	□□□□□ -1.64
PDE1	YGL248W	ASA1	Q06822	443 aa		4.81	□□□□□ -1.64
PDE1	YGL248W	YPR091C	Q06833	770 aa		4.81	□□□□□ -1.64
PDE1	YGL248W	SNU23	Q12368	194 aa	Predicted RBP	4.81	□□□□□ -1.64
PDE1	YGL248W	TPK3	P05986	398 aa		4.8	□□□□□ -1.64
PDE1	YGL248W	FLO10	P36170	1169 aa		4.8	□□□□□ -1.64
PDE1	YGL248W	CTP1	P38152	299 aa		4.8	□□□□□ -1.64
PDE1	YGL248W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	4.8	□□□□□ -1.64	not detected
PDE1	YGL248W	IST2	P38250	946 aa		4.8	□□□□□ -1.64
PDE1	YGL248W	YHR035W	P38769	630 aa		4.8	□□□□□ -1.64
PDE1	YGL248W	RGI1	P40043	161 aa	Predicted RBP	4.8	□□□□□ -1.64
PDE1	YGL248W	FMP32	P43557	207 aa		4.8	□□□□□ -1.64
PDE1	YGL248W	CHA4	P43634	648 aa		4.8	□□□□□ -1.64
PDE1	YGL248W	NBP1	P52919	319 aa	Predicted RBP	4.8	□□□□□ -1.64
PDE1	YGL248W	ALG13	P53178	202 aa		4.8	□□□□□ -1.64
PDE1	YGL248W	AAT1	Q01802	451 aa		4.8	□□□□□ -1.64
PDE1	YGL248W	CSN9	Q03981	162 aa		4.8	□□□□□ -1.64
PDE1	YGL248W	YML053C	Q04978	212 aa		4.8	□□□□□ -1.64
PDE1	YGL248W	GRX8	Q05926	109 aa		4.8	□□□□□ -1.64
PDE1	YGL248W	NEJ1	Q06148	342 aa		4.8	□□□□□ -1.64
PDE1	YGL248W	NOC4	Q06512	552 aa	Predicted RBP	4.8	□□□□□ -1.64
PDE1	YGL248W	ICT1	Q12385	394 aa		4.8	□□□□□ -1.64
PDE1	YGL248W	MES1	P00958	751 aa	Known RBP	4.79	□□□□□ -1.64
PDE1	YGL248W	IMA3	P0CW40	589 aa		4.79	□□□□□ -1.64
PDE1	YGL248W	IMA4	P0CW41	589 aa		4.79	□□□□□ -1.64
PDE1	YGL248W	CUP2	P15315	225 aa		4.79	□□□□□ -1.64
PDE1	YGL248W	MBR1	P23493	339 aa		4.79	□□□□□ -1.64
PDE1	YGL248W	HOM6	P31116	359 aa	Known RBP	4.79	□□□□□ -1.64
PDE1	YGL248W	CAT2	P32796	670 aa	Known RBP	4.79	□□□□□ -1.64
PDE1	YGL248W	COX13	P32799	129 aa		4.79	□□□□□ -1.64
PDE1	YGL248W	GSP1	P32835	219 aa	Known RBP	4.79	□□□□□ -1.64
PDE1	YGL248W	GSP2	P32836	220 aa	Known RBP	4.79	□□□□□ -1.64
PDE1	YGL248W	MSN2	P33748	704 aa		4.79	□□□□□ -1.64
PDE1	YGL248W	YKL187C	P34231	750 aa		4.79	□□□□□ -1.64
PDE1	YGL248W	MED8	P38304	223 aa		4.79	□□□□□ -1.64
PDE1	YGL248W	EFM1	P38732	585 aa		4.79	□□□□□ -1.64
PDE1	YGL248W	RBG1	P39729	369 aa		4.79	□□□□□ -1.64
PDE1	YGL248W	YIA6	P40556	373 aa		4.79	□□□□□ -1.64
PDE1	YGL248W	RPS10B	P46784	105 aa	Known RBP	4.79	□□□□□ -1.64
PDE1	YGL248W	SOL4	P53315	255 aa		4.79	□□□□□ -1.64
PDE1	YGL248W	ASI3	P53983	676 aa		4.79	□□□□□ -1.64
PDE1	YGL248W	YVH1	Q02256	364 aa	Known RBP	4.79	□□□□□ -1.64
PDE1	YGL248W	CWC27	Q02770	301 aa		4.79	□□□□□ -1.64
PDE1	YGL248W	YMR279C	Q03263	540 aa		4.79	□□□□□ -1.64
PDE1	YGL248W	PKR1	Q03880	122 aa	Known RBP	4.79	□□□□□ -1.64
PDE1	YGL248W	YDR387C	Q04162	555 aa		4.79	□□□□□ -1.64
PDE1	YGL248W	YMR315W	Q04869	349 aa	Known RBP	4.79	□□□□□ -1.64
PDE1	YGL248W	HRD3	Q05787	833 aa		4.79	□□□□□ -1.64
PDE1	YGL248W	YDL086W	Q07505	273 aa		4.79	□□□□□ -1.64
PDE1	YGL248W	IMA2	Q08295	589 aa		4.79	□□□□□ -1.64
PDE1	YGL248W	USB1	Q12208	290 aa	Known RBP	4.79	□□□□□ -1.64
PDE1	YGL248W	FYV7	Q12247	151 aa		4.79	□□□□□ -1.64
PDE1	YGL248W	IES3	Q12345	250 aa		4.79	□□□□□ -1.64
PDE1	YGL248W	EFG1	Q3E705	233 aa	Known RBP	4.79	□□□□□ -1.64
PDE1	YGL248W	YOR304C-A	O14468	76 aa		4.78	□□□□□ -1.64
PDE1	YGL248W	HEM2	P05373	342 aa		4.78	□□□□□ -1.64
PDE1	YGL248W	TYR1	P20049	452 aa		4.78	□□□□□ -1.64
PDE1	YGL248W	PMT2	P31382	759 aa		4.78	□□□□□ -1.64
PDE1	YGL248W	NTF2	P33331	125 aa	Known RBP	4.78	□□□□□ -1.64
PDE1	YGL248W	ECM15	P35195	104 aa		4.78	□□□□□ -1.64
PDE1	YGL248W	MRPL17	P36528	281 aa		4.78	□□□□□ -1.64
PDE1	YGL248W	FMP23	P38231	175 aa		4.78	□□□□□ -1.64
PDE1	YGL248W	YBR242W	P38331	238 aa		4.78	□□□□□ -1.64
PDE1	YGL248W	SMB1	P40018	196 aa	Known RBP	4.78	□□□□□ -1.64
PDE1	YGL248W	RRG9	P40156	214 aa		4.78	□□□□□ -1.64
PDE1	YGL248W	SYG1	P40528	902 aa		4.78	□□□□□ -1.64
PDE1	YGL248W	LST7	P53237	242 aa		4.78	□□□□□ -1.64
PDE1	YGL248W	CAF40	P53829	373 aa		4.78	□□□□□ -1.64
PDE1	YGL248W	DUG3	P53871	357 aa		4.78	□□□□□ -1.64
PDE1	YGL248W	YNL092W	P53934	400 aa		4.78	□□□□□ -1.64
PDE1	YGL248W	SNU56	Q03782	492 aa	Known RBP	4.78	□□□□□ -1.64
PDE1	YGL248W	INM2	Q05533	292 aa		4.78	□□□□□ -1.64
PDE1	YGL248W	GLO2	Q05584	274 aa		4.78	□□□□□ -1.64
PDE1	YGL248W	MRX9	Q07349	420 aa	Known RBP	4.78	□□□□□ -1.64
PDE1	YGL248W	RGT2	Q12300	763 aa		4.78	□□□□□ -1.64
PDE1	YGL248W	HIS3	P06633	220 aa		4.77	□□□□□ -1.65
PDE1	YGL248W	RPL31A	P0C2H8	113 aa	Known RBP	4.77	□□□□□ -1.65
PDE1	YGL248W	RPL20A	P0CX23	172 aa	Known RBP	4.77	□□□□□ -1.65
PDE1	YGL248W	RPL20B	P0CX24	172 aa	Predicted RBP	4.77	□□□□□ -1.65
PDE1	YGL248W	MTF1	P14908	341 aa	Known RBP	4.77	□□□□□ -1.65
PDE1	YGL248W	GLN3	P18494	730 aa		4.77	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 20.9 ms