RNA–Protein interactions for RNA: YDR312W

SSF2, Transcript of Protein required for ribosomal large subunit maturation, yeastyeast

Gene SSF2, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSF2YDR312W VMA5P31412 392 aaKnown RBP2.08□□□□□ -2.08
SSF2YDR312W TOA1P32773 286 aa2.08□□□□□ -2.08
SSF2YDR312W COS9P36034 407 aa2.08□□□□□ -2.08
SSF2YDR312W SHE3P38272 425 aaKnown RBP2.08□□□□□ -2.08
SSF2YDR312W YDR089WP38966 869 aa2.08□□□□□ -2.08
SSF2YDR312W PRP39P39682 629 aaKnown RBP2.08□□□□□ -2.08
SSF2YDR312W BTT1P40314 149 aaPredicted RBP2.08□□□□□ -2.08
SSF2YDR312W RPL21AQ02753 160 aaKnown RBP2.08□□□□□ -2.08
SSF2YDR312W ECM11Q04110 302 aa2.08□□□□□ -2.08
SSF2YDR312W AIM33Q04516 312 aa2.08□□□□□ -2.08
SSF2YDR312W FSH2Q05015 223 aa2.08□□□□□ -2.08
SSF2YDR312W MCH1Q07376 486 aa2.08□□□□□ -2.08
SSF2YDR312W YDL144CQ07589 356 aa2.08□□□□□ -2.08
SSF2YDR312W YOR012WQ12351 137 aa2.08□□□□□ -2.08
SSF2YDR312W RPL21BQ12672 160 aaKnown RBP2.08□□□□□ -2.08
SSF2YDR312W YIL046W-AQ3E7Z4 54 aa2.08□□□□□ -2.08
SSF2YDR312W GCD2P12754 651 aaPredicted RBP2.07□□□□□ -2.08
SSF2YDR312W UNG1P12887 359 aa2.07□□□□□ -2.08
SSF2YDR312W MXR2P25566 168 aa2.07□□□□□ -2.08
SSF2YDR312W PMT2P31382 759 aa2.07□□□□□ -2.08
SSF2YDR312W IST2P38250 946 aa2.07□□□□□ -2.08
SSF2YDR312W EFM1P38732 585 aa2.07□□□□□ -2.08
SSF2YDR312W SSO2P39926 295 aa2.07□□□□□ -2.08
SSF2YDR312W YNL320WP42840 284 aa2.07□□□□□ -2.08
SSF2YDR312W LOH1P47055 219 aa2.07□□□□□ -2.08
SSF2YDR312W ARP5P53946 755 aa2.07□□□□□ -2.08
SSF2YDR312W RVB1Q03940 463 aaKnown RBP2.07□□□□□ -2.08
SSF2YDR312W SMP3Q04174 516 aa2.07□□□□□ -2.08
SSF2YDR312W VPS20Q04272 221 aa2.07□□□□□ -2.08
SSF2YDR312W MYO5Q04439 1219 aaKnown RBP2.07□□□□□ -2.08
SSF2YDR312W PIN3Q06449 215 aa2.07□□□□□ -2.08
SSF2YDR312W RPN8Q08723 338 aaKnown RBP2.07□□□□□ -2.08
SSF2YDR312W YPL278CQ08990 100 aa2.07□□□□□ -2.08
SSF2YDR312W YIL002W-AQ3E7Z5 69 aa2.07□□□□□ -2.08
SSF2YDR312W YLR422WQ06409 1932 aa2.06□□□□□ -2.08
SSF2YDR312W CBP2P03874 630 aaPredicted RBP2.06□□□□□ -2.08
SSF2YDR312W FPR1P20081 114 aaKnown RBP2.06□□□□□ -2.08
SSF2YDR312W SAR1P20606 190 aaKnown RBP2.06□□□□□ -2.08
SSF2YDR312W MAK31P23059 88 aa2.06□□□□□ -2.08
SSF2YDR312W MIR1P23641 311 aaKnown RBP2.06□□□□□ -2.08
SSF2YDR312W ITR2P30606 609 aa2.06□□□□□ -2.08
SSF2YDR312W ZUO1P32527 433 aaKnown RBP2.06□□□□□ -2.08
SSF2YDR312W CYM1P32898 989 aa2.06□□□□□ -2.08
SSF2YDR312W RPS0AP32905 252 aaKnown RBP2.06□□□□□ -2.08
SSF2YDR312W SRX1P36077 127 aa2.06□□□□□ -2.08
SSF2YDR312W ALP1P38971 573 aa2.06□□□□□ -2.08
SSF2YDR312W PEX22P39718 180 aa2.06□□□□□ -2.08
SSF2YDR312W LOC1P43586 204 aaPredicted RBP2.06□□□□□ -2.08
SSF2YDR312W YJR030CP47101 745 aa2.06□□□□□ -2.08
SSF2YDR312W BIO3P50277 480 aa2.06□□□□□ -2.08
SSF2YDR312W TAF6P53040 516 aa2.06□□□□□ -2.08
SSF2YDR312W FLC3P53121 802 aa2.06□□□□□ -2.08
SSF2YDR312W CDH1P53197 566 aa2.06□□□□□ -2.08
SSF2YDR312W NAT4Q04751 285 aa2.06□□□□□ -2.08
SSF2YDR312W GAS2Q06135 555 aa2.06□□□□□ -2.08
SSF2YDR312W DTD1Q07648 150 aaKnown RBP2.06□□□□□ -2.08
SSF2YDR312W REX3Q12090 404 aa2.06□□□□□ -2.08
SSF2YDR312W MOT1P32333 1867 aa2.06□□□□□ -2.08
SSF2YDR312W RAD50P12753 1312 aa2.05□□□□□ -2.08
SSF2YDR312W MEC1P38111 2368 aa2.05□□□□□ -2.08
SSF2YDR312W ASP3-2P0CX77 362 aa2.05□□□□□ -2.08
SSF2YDR312W ASP3-3P0CX78 362 aa2.05□□□□□ -2.08
SSF2YDR312W ASP3-4P0CX79 362 aa2.05□□□□□ -2.08
SSF2YDR312W ASP3-1P0CZ17 362 aa2.05□□□□□ -2.08
SSF2YDR312W GAL3P13045 520 aa2.05□□□□□ -2.08
SSF2YDR312W CTA1P15202 515 aa2.05□□□□□ -2.08
SSF2YDR312W PUT4P15380 627 aa2.05□□□□□ -2.08
SSF2YDR312W MKK1P32490 508 aa2.05□□□□□ -2.08
SSF2YDR312W SUR1P33300 382 aa2.05□□□□□ -2.08
SSF2YDR312W PCH2P38126 564 aa2.05□□□□□ -2.08
SSF2YDR312W SMP1P38128 452 aa2.05□□□□□ -2.08
SSF2YDR312W YBR241CP38142 488 aa2.05□□□□□ -2.08
SSF2YDR312W MMS21P38632 267 aa2.05□□□□□ -2.08
SSF2YDR312W ATG7P38862 630 aa2.05□□□□□ -2.08
SSF2YDR312W CHL4P38907 458 aa2.05□□□□□ -2.08
SSF2YDR312W UTP25P40498 721 aaKnown RBP2.05□□□□□ -2.08
SSF2YDR312W AIM23P47015 356 aa2.05□□□□□ -2.08
SSF2YDR312W YGR015CP53208 328 aa2.05□□□□□ -2.08
SSF2YDR312W NRM1P53718 249 aa2.05□□□□□ -2.08
SSF2YDR312W PRO2P54885 456 aaKnown RBP2.05□□□□□ -2.08
SSF2YDR312W SLT2Q00772 484 aa2.05□□□□□ -2.08
SSF2YDR312W CSM3Q04659 317 aa2.05□□□□□ -2.08
SSF2YDR312W SLF1Q12034 447 aaKnown RBP2.05□□□□□ -2.08
SSF2YDR312W SRO7Q12038 1033 aa2.05□□□□□ -2.08
SSF2YDR312W TIR4Q12218 487 aaPredicted RBP2.05□□□□□ -2.08
SSF2YDR312W TPI1P00942 248 aaKnown RBP2.04□□□□□ -2.08
SSF2YDR312W URA10P30402 227 aa2.04□□□□□ -2.08
SSF2YDR312W MRX3P38172 270 aa2.04□□□□□ -2.08
SSF2YDR312W SHE1P38200 338 aa2.04□□□□□ -2.08
SSF2YDR312W OSW5P40219 148 aa2.04□□□□□ -2.08
SSF2YDR312W MOB2P43563 287 aa2.04□□□□□ -2.08
SSF2YDR312W YFL012WP43580 148 aa2.04□□□□□ -2.08
SSF2YDR312W YJR054WP47114 497 aa2.04□□□□□ -2.08
SSF2YDR312W VEL1P53058 206 aa2.04□□□□□ -2.08
SSF2YDR312W HCH1P53834 153 aa2.04□□□□□ -2.08
SSF2YDR312W RNH201P53942 307 aa2.04□□□□□ -2.08
SSF2YDR312W RMI1Q02685 241 aa2.04□□□□□ -2.08
SSF2YDR312W TRM82Q03774 444 aa2.04□□□□□ -2.08
SSF2YDR312W YLR297WQ05899 129 aa2.04□□□□□ -2.08
SSF2YDR312W IES4Q08561 116 aa2.04□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 55.2 ms