RNA–Protein interactions for RNA: YDR086C

SSS1, Transcript of Subunit of the Sec61p translocation complex (Sec61p-Sss1p-Sbh1p), yeast

Gene SSS1, Length 243 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSS1	YDR086C	SPS100	P13130	326 aa		0.62	□□□□□ -2.31
SSS1	YDR086C	IFM1	P25038	676 aa		0.62	□□□□□ -2.31
SSS1	YDR086C	FAA1	P30624	700 aa	Known RBP	0.62	□□□□□ -2.31
SSS1	YDR086C	CDC13	P32797	924 aa	Known RBP	0.62	□□□□□ -2.31
SSS1	YDR086C	MBA1	P38300	278 aa		0.62	□□□□□ -2.31
SSS1	YDR086C	COG3	P40094	801 aa		0.62	□□□□□ -2.31
SSS1	YDR086C	YJL027C	P47063	138 aa	Predicted RBP	0.62	□□□□□ -2.31
SSS1	YDR086C	YNR068C	P53754	272 aa		0.62	□□□□□ -2.31
SSS1	YDR086C	SXM1	Q04175	944 aa	Known RBP	0.62	□□□□□ -2.31
SSS1	YDR086C	GRH1	Q04410	372 aa	Known RBP	0.62	□□□□□ -2.31
SSS1	YDR086C	RGS2	Q99188	309 aa		0.62	□□□□□ -2.31
SSS1	YDR086C	ACB1	P31787	87 aa		0.61	□□□□□ -2.31
SSS1	YDR086C	SPL2	P38839	148 aa		0.61	□□□□□ -2.31
SSS1	YDR086C	PET8	P38921	284 aa		0.61	□□□□□ -2.31
SSS1	YDR086C	CAJ1	P39101	391 aa		0.61	□□□□□ -2.31
SSS1	YDR086C	AVT6	P40074	448 aa		0.61	□□□□□ -2.31
SSS1	YDR086C	YGR016W	P53209	190 aa		0.61	□□□□□ -2.31
SSS1	YDR086C	SLM2	P53955	656 aa		0.61	□□□□□ -2.31
SSS1	YDR086C	YDL144C	Q07589	356 aa		0.61	□□□□□ -2.31
SSS1	YDR086C	AGC1	Q12482	902 aa		0.61	□□□□□ -2.31
SSS1	YDR086C	YAL063C-A	Q3E791	96 aa		0.61	□□□□□ -2.31
SSS1	YDR086C	GAL7	P08431	366 aa		0.6	□□□□□ -2.31
SSS1	YDR086C	RDS1	P25611	832 aa		0.6	□□□□□ -2.31
SSS1	YDR086C	MDL1	P33310	695 aa		0.6	□□□□□ -2.31
SSS1	YDR086C	PXA2	P34230	853 aa		0.6	□□□□□ -2.31
SSS1	YDR086C	COY1	P34237	679 aa		0.6	□□□□□ -2.31
SSS1	YDR086C	YHL026C	P38740	315 aa		0.6	□□□□□ -2.31
SSS1	YDR086C	SUR2	P38992	349 aa		0.6	□□□□□ -2.31
SSS1	YDR086C	LSM4	P40070	187 aa	Known RBP	0.6	□□□□□ -2.31
SSS1	YDR086C	UTP25	P40498	721 aa	Known RBP	0.6	□□□□□ -2.31
SSS1	YDR086C	OST3	P48439	350 aa		0.6	□□□□□ -2.31
SSS1	YDR086C	PRP24	P49960	444 aa	Known RBP	0.6	□□□□□ -2.31
SSS1	YDR086C	TAF6	P53040	516 aa		0.6	□□□□□ -2.31
SSS1	YDR086C	CTS2	Q06350	511 aa		0.6	□□□□□ -2.31
SSS1	YDR086C	YPL150W	Q12152	901 aa		0.6	□□□□□ -2.31
SSS1	YDR086C	TFB5	Q3E7C1	72 aa	Predicted RBP	0.6	□□□□□ -2.31
SSS1	YDR086C	LAG2	Q92325	660 aa		0.6	□□□□□ -2.31
SSS1	YDR086C	ERD1	P16151	362 aa		0.59	□□□□□ -2.31
SSS1	YDR086C	OSM1	P21375	501 aa	Known RBP	0.59	□□□□□ -2.31
SSS1	YDR086C	UBA1	P22515	1024 aa	Known RBP	0.59	□□□□□ -2.31
SSS1	YDR086C	CIN8	P27895	1000 aa		0.59	□□□□□ -2.31
SSS1	YDR086C	SWE1	P32944	819 aa		0.59	□□□□□ -2.31
SSS1	YDR086C	YOR062C	P36025	268 aa		0.59	□□□□□ -2.31
SSS1	YDR086C	MRPL3	P36516	390 aa		0.59	□□□□□ -2.31
SSS1	YDR086C	SOP4	P39543	234 aa	Predicted RBP	0.59	□□□□□ -2.31
SSS1	YDR086C	BTT1	P40314	149 aa	Predicted RBP	0.59	□□□□□ -2.31
SSS1	YDR086C	AYR1	P40471	297 aa		0.59	□□□□□ -2.31
SSS1	YDR086C	YIL089W	P40500	205 aa		0.59	□□□□□ -2.31
SSS1	YDR086C	RPA34	P47006	233 aa	Predicted RBP	0.59	□□□□□ -2.31
SSS1	YDR086C	YJL016W	P47072	561 aa		0.59	□□□□□ -2.31
SSS1	YDR086C	PXR1	P53335	271 aa	Predicted RBP	0.59	□□□□□ -2.31
SSS1	YDR086C	FCF1	Q05498	189 aa	Predicted RBP	0.59	□□□□□ -2.31
SSS1	YDR086C	YLL053C	P0CD98	152 aa		0.58	□□□□□ -2.32
SSS1	YDR086C	RPL16B	P26785	198 aa	Known RBP	0.58	□□□□□ -2.32
SSS1	YDR086C	VMA5	P31412	392 aa	Known RBP	0.58	□□□□□ -2.32
SSS1	YDR086C	GPX1	P36014	167 aa		0.58	□□□□□ -2.32
SSS1	YDR086C	GDI1	P39958	451 aa	Known RBP	0.58	□□□□□ -2.32
SSS1	YDR086C	UTP6	Q02354	440 aa	Known RBP	0.58	□□□□□ -2.32
SSS1	YDR086C	INM2	Q05533	292 aa		0.58	□□□□□ -2.32
SSS1	YDR086C	YLL007C	Q07799	665 aa		0.58	□□□□□ -2.32
SSS1	YDR086C	NUP157	P40064	1391 aa	Known RBP	0.57	□□□□□ -2.32
SSS1	YDR086C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	0.57	□□□□□ -2.32	not detected
SSS1	YDR086C	KRE29	P40026	464 aa		0.57	□□□□□ -2.32
SSS1	YDR086C	YIL012W	P40551	113 aa		0.57	□□□□□ -2.32
SSS1	YDR086C	COG7	P53195	279 aa		0.57	□□□□□ -2.32
SSS1	YDR086C	RVB1	Q03940	463 aa	Known RBP	0.57	□□□□□ -2.32
SSS1	YDR086C	YLR446W	Q06204	433 aa		0.57	□□□□□ -2.32
SSS1	YDR086C	YOR268C	Q08734	132 aa		0.57	□□□□□ -2.32
SSS1	YDR086C	YPL278C	Q08990	100 aa		0.57	□□□□□ -2.32
SSS1	YDR086C	ATG5	Q12380	294 aa		0.57	□□□□□ -2.32
SSS1	YDR086C	PAR32	Q12515	295 aa	Known RBP	0.57	□□□□□ -2.32
SSS1	YDR086C	ISD11	Q6Q560	94 aa		0.57	□□□□□ -2.32
SSS1	YDR086C	YEL009C-A	A0A023PZF2	135 aa		0.56	□□□□□ -2.32
SSS1	YDR086C	HXT2	P23585	541 aa		0.56	□□□□□ -2.32
SSS1	YDR086C	MNE1	P24720	663 aa		0.56	□□□□□ -2.32
SSS1	YDR086C	ATG15	P25641	520 aa		0.56	□□□□□ -2.32
SSS1	YDR086C	IMP1	P28627	190 aa		0.56	□□□□□ -2.32
SSS1	YDR086C	VMA8	P32610	256 aa	Known RBP	0.56	□□□□□ -2.32
SSS1	YDR086C	YHR035W	P38769	630 aa		0.56	□□□□□ -2.32
SSS1	YDR086C	SPT8	P38915	602 aa		0.56	□□□□□ -2.32
SSS1	YDR086C	YER135C	P40082	130 aa		0.56	□□□□□ -2.32
SSS1	YDR086C	TIF34	P40217	347 aa	Known RBP	0.56	□□□□□ -2.32
SSS1	YDR086C	SNX41	Q04053	625 aa		0.56	□□□□□ -2.32
SSS1	YDR086C	NBL1	Q3E7Y6	73 aa		0.56	□□□□□ -2.32
SSS1	YDR086C	UBR2	Q07963	1872 aa		0.55	□□□□□ -2.32
SSS1	YDR086C	RAD7	P06779	565 aa		0.55	□□□□□ -2.32
SSS1	YDR086C	YCR102C	P25608	368 aa		0.55	□□□□□ -2.32
SSS1	YDR086C	BMH1	P29311	267 aa	Known RBP	0.55	□□□□□ -2.32
SSS1	YDR086C	CAT2	P32796	670 aa	Known RBP	0.55	□□□□□ -2.32
SSS1	YDR086C	TPO5	P36029	618 aa		0.55	□□□□□ -2.32
SSS1	YDR086C	DAD2	P36162	133 aa		0.55	□□□□□ -2.32
SSS1	YDR086C	YSW1	P38280	609 aa		0.55	□□□□□ -2.32
SSS1	YDR086C	YJL118W	P47022	219 aa		0.55	□□□□□ -2.32
SSS1	YDR086C	TPN1	P53099	579 aa		0.55	□□□□□ -2.32
SSS1	YDR086C	SWT21	P53873	357 aa	Predicted RBP	0.55	□□□□□ -2.32
SSS1	YDR086C	DAD3	P69850	94 aa		0.55	□□□□□ -2.32
SSS1	YDR086C	IRC4	Q03036	179 aa		0.55	□□□□□ -2.32
SSS1	YDR086C	UTP23	Q12339	254 aa	Known RBP	0.55	□□□□□ -2.32
SSS1	YDR086C	PAN1	P32521	1480 aa		0.54	□□□□□ -2.32
SSS1	YDR086C	PUT1	P09368	476 aa		0.54	□□□□□ -2.32

Retrieved 100 of 5,963 RNA–protein pairs in 28.2 ms