RNA–Protein interactions for RNA: YDR080W

VPS41, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VPS41, Length 2,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS41YDR080W YPL247CQ12523 523 aa2.18□□□□□ -2.06
VPS41YDR080W CMD1P06787 147 aaKnown RBP2.18□□□□□ -2.06
VPS41YDR080W PHO81P17442 1178 aa2.18□□□□□ -2.06
VPS41YDR080W RPO26P20435 155 aa2.18□□□□□ -2.06
VPS41YDR080W KGD1P20967 1014 aaKnown RBP2.18□□□□□ -2.06
VPS41YDR080W MRP20P32387 263 aa2.18□□□□□ -2.06
VPS41YDR080W YEL043WP32618 956 aa2.18□□□□□ -2.06
VPS41YDR080W CAT2P32796 670 aaKnown RBP2.18□□□□□ -2.06
VPS41YDR080W YOX1P34161 385 aa2.18□□□□□ -2.06
VPS41YDR080W ANS1P38832 159 aa2.18□□□□□ -2.06
VPS41YDR080W ARF3P40994 183 aaRIP-Chip data2.18□□□□□ -2.06 RIP-Chip
VPS41YDR080W POP1P41812 875 aa2.18□□□□□ -2.06
VPS41YDR080W ARC1P46672 376 aaKnown RBP2.18□□□□□ -2.06
VPS41YDR080W GTO1P48239 356 aa2.18□□□□□ -2.06
VPS41YDR080W YDR124WQ04608 324 aa2.18□□□□□ -2.06
VPS41YDR080W NIP7Q08962 181 aaKnown RBP2.18□□□□□ -2.06
VPS41YDR080W YPR202WQ08993 238 aa2.18□□□□□ -2.06
VPS41YDR080W SPE4Q12455 300 aa2.18□□□□□ -2.06
VPS41YDR080W APA2P22108 325 aa2.17□□□□□ -2.06
VPS41YDR080W SAN1P22470 610 aa2.17□□□□□ -2.06
VPS41YDR080W YME2P32843 850 aa2.17□□□□□ -2.06
VPS41YDR080W RIM2P38127 377 aa2.17□□□□□ -2.06
VPS41YDR080W CHK1P38147 527 aa2.17□□□□□ -2.06
VPS41YDR080W COG3P40094 801 aa2.17□□□□□ -2.06
VPS41YDR080W SMK1P41808 388 aa2.17□□□□□ -2.06
VPS41YDR080W YNL046WP53956 172 aa2.17□□□□□ -2.06
VPS41YDR080W YMR087WQ04299 284 aa2.17□□□□□ -2.06
VPS41YDR080W YLR413WQ06689 675 aa2.17□□□□□ -2.06
VPS41YDR080W MCP1Q12106 302 aa2.17□□□□□ -2.06
VPS41YDR080W YBR298C-AQ8TGK4 73 aa2.17□□□□□ -2.06
VPS41YDR080W CBP2P03874 630 aaPredicted RBP2.17□□□□□ -2.06
VPS41YDR080W MRP13P12686 339 aa2.17□□□□□ -2.06
VPS41YDR080W UNG1P12887 359 aa2.17□□□□□ -2.06
VPS41YDR080W SPO7P18410 259 aa2.17□□□□□ -2.06
VPS41YDR080W CAF4P36130 643 aa2.17□□□□□ -2.06
VPS41YDR080W YBR096WP38256 230 aa2.17□□□□□ -2.06
VPS41YDR080W UTP9P38882 575 aaKnown RBP2.17□□□□□ -2.06
VPS41YDR080W CAJ1P39101 391 aa2.17□□□□□ -2.06
VPS41YDR080W SEC9P40357 651 aa2.17□□□□□ -2.06
VPS41YDR080W YIL029CP40538 142 aa2.17□□□□□ -2.06
VPS41YDR080W NCA3P46955 337 aa2.17□□□□□ -2.06
VPS41YDR080W PCP1P53259 346 aa2.17□□□□□ -2.06
VPS41YDR080W URH1Q04179 340 aa2.17□□□□□ -2.06
VPS41YDR080W UAF30Q08747 228 aa2.17□□□□□ -2.06
VPS41YDR080W COS2P0CX12 379 aa2.16□□□□□ -2.06
VPS41YDR080W COS3P0CX13 379 aa2.16□□□□□ -2.06
VPS41YDR080W PET123P17558 318 aa2.16□□□□□ -2.06
VPS41YDR080W ITR2P30606 609 aa2.16□□□□□ -2.06
VPS41YDR080W RPN2P32565 945 aaKnown RBP2.16□□□□□ -2.06
VPS41YDR080W MNS1P32906 549 aa2.16□□□□□ -2.06
VPS41YDR080W IAH1P41734 238 aa2.16□□□□□ -2.06
VPS41YDR080W COS4P43542 379 aa2.16□□□□□ -2.06
VPS41YDR080W YNL234WP53857 426 aa2.16□□□□□ -2.06
VPS41YDR080W MMT1Q03218 510 aa2.16□□□□□ -2.06
VPS41YDR080W YMR155WQ03795 547 aa2.16□□□□□ -2.06
VPS41YDR080W RVB1Q03940 463 aaKnown RBP2.16□□□□□ -2.06
VPS41YDR080W SCW10Q04951 389 aa2.16□□□□□ -2.06
VPS41YDR080W YET3Q07451 203 aa2.16□□□□□ -2.06
VPS41YDR080W RDL2Q08742 149 aaKnown RBP2.16□□□□□ -2.06
VPS41YDR080W YRM1Q12340 786 aa2.16□□□□□ -2.06
VPS41YDR080W MDH2P22133 377 aa2.16□□□□□ -2.06
VPS41YDR080W MRPL25P23369 157 aa2.16□□□□□ -2.06
VPS41YDR080W CDC39P25655 2108 aaKnown RBP2.16□□□□□ -2.06
VPS41YDR080W CYS4P32582 507 aaKnown RBP2.16□□□□□ -2.06
VPS41YDR080W TEF4P36008 412 aaKnown RBP2.16□□□□□ -2.06
VPS41YDR080W RCK1P38622 512 aa2.16□□□□□ -2.06
VPS41YDR080W MOB2P43563 287 aa2.16□□□□□ -2.06
VPS41YDR080W SHE4P51534 789 aa2.16□□□□□ -2.06
VPS41YDR080W MAL13P53338 473 aa2.16□□□□□ -2.06
VPS41YDR080W YDR476CQ03362 224 aa2.16□□□□□ -2.06
VPS41YDR080W TAZ1Q06510 381 aa2.16□□□□□ -2.06
VPS41YDR080W SET6Q12529 373 aa2.16□□□□□ -2.06
VPS41YDR080W FSH3Q99369 266 aa2.16□□□□□ -2.06
VPS41YDR080W BLM10P43583 2143 aa2.16□□□□□ -2.06
VPS41YDR080W TFS1P14306 219 aa2.16□□□□□ -2.06
VPS41YDR080W DAL80P26343 269 aa2.16□□□□□ -2.06
VPS41YDR080W PUP2P32379 260 aa2.16□□□□□ -2.06
VPS41YDR080W ATG7P38862 630 aa2.16□□□□□ -2.06
VPS41YDR080W LYS12P40495 371 aaKnown RBP2.16□□□□□ -2.06
VPS41YDR080W DPB11P47027 764 aaPredicted RBP2.16□□□□□ -2.06
VPS41YDR080W GTR1Q00582 310 aa2.16□□□□□ -2.06
VPS41YDR080W CSN9Q03981 162 aa2.16□□□□□ -2.06
VPS41YDR080W RHO2P06781 192 aa2.15□□□□□ -2.07
VPS41YDR080W RPS23AP0CX29 145 aaKnown RBP2.15□□□□□ -2.07
VPS41YDR080W RPS23BP0CX30 145 aa2.15□□□□□ -2.07
VPS41YDR080W HSC82P15108 705 aaKnown RBP2.15□□□□□ -2.07
VPS41YDR080W UGA1P17649 471 aa2.15□□□□□ -2.07
VPS41YDR080W RVS161P25343 265 aaKnown RBP2.15□□□□□ -2.07
VPS41YDR080W FRE2P36033 711 aa2.15□□□□□ -2.07
VPS41YDR080W FIG1P38224 298 aa2.15□□□□□ -2.07
VPS41YDR080W STP2P38704 541 aa2.15□□□□□ -2.07
VPS41YDR080W MTC6P38849 526 aa2.15□□□□□ -2.07
VPS41YDR080W PEP8P40335 379 aa2.15□□□□□ -2.07
VPS41YDR080W APT1P49435 187 aaKnown RBP2.15□□□□□ -2.07
VPS41YDR080W YPT32P51996 222 aaKnown RBP2.15□□□□□ -2.07
VPS41YDR080W AIF1P52923 378 aa2.15□□□□□ -2.07
VPS41YDR080W YNR068CP53754 272 aa2.15□□□□□ -2.07
VPS41YDR080W MSC1Q03104 513 aa2.15□□□□□ -2.07
VPS41YDR080W IPK1Q06667 281 aa2.15□□□□□ -2.07
VPS41YDR080W INP53Q12271 1107 aa2.15□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 26.5 ms