RNA–Protein interactions for RNA: YDR049W

VMS1, Transcript of Component of a Cdc48p-complex involved in protein quality control, yeastyeast

Gene VMS1, Length 1,899 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMS1YDR049W CTP1P38152 299 aa5.22□□□□□ -1.57
VMS1YDR049W YAL037WP39728 267 aa5.22□□□□□ -1.57
VMS1YDR049W SMB1P40018 196 aaKnown RBP5.22□□□□□ -1.57
VMS1YDR049W ASG7P46993 209 aa5.22□□□□□ -1.57
VMS1YDR049W YJR030CP47101 745 aa5.22□□□□□ -1.57
VMS1YDR049W CPD1P53314 239 aa5.22□□□□□ -1.57
VMS1YDR049W YIF1P53845 314 aaKnown RBP5.22□□□□□ -1.57
VMS1YDR049W COG5P53951 403 aa5.22□□□□□ -1.57
VMS1YDR049W CDC14Q00684 551 aa5.22□□□□□ -1.57
VMS1YDR049W TPS1Q00764 495 aaKnown RBP5.22□□□□□ -1.57
VMS1YDR049W PLM2Q04383 521 aa5.22□□□□□ -1.57
VMS1YDR049W YLR031WQ07978 186 aa5.22□□□□□ -1.57
VMS1YDR049W MED7Q08278 222 aa5.22□□□□□ -1.57
VMS1YDR049W ENB1Q08299 606 aa5.22□□□□□ -1.57
VMS1YDR049W YPL225WQ08971 146 aaKnown RBP5.22□□□□□ -1.57
VMS1YDR049W MLH3Q12083 715 aa5.22□□□□□ -1.57
VMS1YDR049W ATG34Q12292 412 aa5.22□□□□□ -1.57
VMS1YDR049W YLR361C-AQ3E795 98 aa5.22□□□□□ -1.57
VMS1YDR049W MHP1P43638 1398 aa5.21□□□□□ -1.57
VMS1YDR049W CDC8P00572 216 aa5.21□□□□□ -1.58
VMS1YDR049W MES1P00958 751 aaKnown RBP5.21□□□□□ -1.58
VMS1YDR049W AMD1P15274 810 aaKnown RBP5.21□□□□□ -1.58
VMS1YDR049W CDC10P25342 322 aaKnown RBP5.21□□□□□ -1.58
VMS1YDR049W SGE1P33335 543 aa5.21□□□□□ -1.58
VMS1YDR049W ANR2P36090 516 aaPredicted RBP5.21□□□□□ -1.58
VMS1YDR049W IST2P38250 946 aa5.21□□□□□ -1.58
VMS1YDR049W RTS2P40962 232 aa5.21□□□□□ -1.58
VMS1YDR049W FMP32P43557 207 aa5.21□□□□□ -1.58
VMS1YDR049W YFL040WP43562 540 aa5.21□□□□□ -1.58
VMS1YDR049W TOS2P50078 622 aa5.21□□□□□ -1.58
VMS1YDR049W PHB2P50085 310 aa5.21□□□□□ -1.58
VMS1YDR049W AKR2Q12013 749 aa5.21□□□□□ -1.58
VMS1YDR049W POM33Q12164 279 aa5.21□□□□□ -1.58
VMS1YDR049W YLL056CQ12177 298 aa5.21□□□□□ -1.58
VMS1YDR049W TPK3P05986 398 aa5.2□□□□□ -1.58
VMS1YDR049W RPL4AP10664 362 aaKnown RBP5.2□□□□□ -1.58
VMS1YDR049W TYR1P20049 452 aa5.2□□□□□ -1.58
VMS1YDR049W IDP1P21954 428 aaKnown RBP5.2□□□□□ -1.58
VMS1YDR049W CPR4P25334 318 aa5.2□□□□□ -1.58
VMS1YDR049W FUN19P28003 413 aaPredicted RBP5.2□□□□□ -1.58
VMS1YDR049W CAT2P32796 670 aaKnown RBP5.2□□□□□ -1.58
VMS1YDR049W YCR087C-AP37263 153 aa5.2□□□□□ -1.58
VMS1YDR049W MED8P38304 223 aa5.2□□□□□ -1.58
VMS1YDR049W RRP3P38712 501 aaKnown RBP5.2□□□□□ -1.58
VMS1YDR049W MET30P39014 640 aa5.2□□□□□ -1.58
VMS1YDR049W RPL4BP49626 362 aaKnown RBP5.2□□□□□ -1.58
VMS1YDR049W MSO1P53604 210 aaKnown RBP5.2□□□□□ -1.58
VMS1YDR049W YNL095CP53932 642 aa5.2□□□□□ -1.58
VMS1YDR049W HER2Q03557 464 aa5.2□□□□□ -1.58
VMS1YDR049W MHR1Q06630 226 aa5.2□□□□□ -1.58
VMS1YDR049W SGT1Q08446 395 aa5.2□□□□□ -1.58
VMS1YDR049W RKI1Q12189 258 aa5.2□□□□□ -1.58
VMS1YDR049W USB1Q12208 290 aaKnown RBP5.2□□□□□ -1.58
VMS1YDR049W HMS1Q12398 434 aa5.2□□□□□ -1.58
VMS1YDR049W RAD52P06778 471 aaKnown RBP5.2□□□□□ -1.58
VMS1YDR049W CUP2P15315 225 aa5.2□□□□□ -1.58
VMS1YDR049W TOA2P32774 122 aa5.2□□□□□ -1.58
VMS1YDR049W NTF2P33331 125 aaKnown RBP5.2□□□□□ -1.58
VMS1YDR049W SUL1P38359 859 aa5.2□□□□□ -1.58
VMS1YDR049W WSC4P38739 605 aa5.2□□□□□ -1.58
VMS1YDR049W MRPL49P40858 161 aaPredicted RBP5.2□□□□□ -1.58
VMS1YDR049W IRC18P47056 224 aa5.2□□□□□ -1.58
VMS1YDR049W YJL016WP47072 561 aa5.2□□□□□ -1.58
VMS1YDR049W ECL1P48235 211 aa5.2□□□□□ -1.58
VMS1YDR049W NUP57P48837 541 aa5.2□□□□□ -1.58
VMS1YDR049W RIM8P53179 542 aa5.2□□□□□ -1.58
VMS1YDR049W YML108WQ03759 105 aa5.2□□□□□ -1.58
VMS1YDR049W YDR387CQ04162 555 aa5.2□□□□□ -1.58
VMS1YDR049W TY1A-MR1Q04215 440 aa5.2□□□□□ -1.58
VMS1YDR049W YML096WQ04489 525 aa5.2□□□□□ -1.58
VMS1YDR049W NOC4Q06512 552 aaPredicted RBP5.2□□□□□ -1.58
VMS1YDR049W DTD1Q07648 150 aaKnown RBP5.2□□□□□ -1.58
VMS1YDR049W AI3P03877 415 aa5.19□□□□□ -1.58
VMS1YDR049W NMT1P14743 455 aa5.19□□□□□ -1.58
VMS1YDR049W DCC1P25559 380 aa5.19□□□□□ -1.58
VMS1YDR049W ZRT1P32804 376 aa5.19□□□□□ -1.58
VMS1YDR049W CSG2P35206 410 aa5.19□□□□□ -1.58
VMS1YDR049W GRE3P38715 327 aaKnown RBP RIP-Chip data5.19□□□□□ -1.58not detected
VMS1YDR049W YHI9P38765 294 aa5.19□□□□□ -1.58
VMS1YDR049W PEX7P39108 375 aa5.19□□□□□ -1.58
VMS1YDR049W PYK2P52489 506 aaKnown RBP5.19□□□□□ -1.58
VMS1YDR049W BRR6P53062 197 aa5.19□□□□□ -1.58
VMS1YDR049W PEX31P53203 462 aa5.19□□□□□ -1.58
VMS1YDR049W TIM44Q01852 431 aa5.19□□□□□ -1.58
VMS1YDR049W SNU56Q03782 492 aaKnown RBP5.19□□□□□ -1.58
VMS1YDR049W YMR315WQ04869 349 aaKnown RBP5.19□□□□□ -1.58
VMS1YDR049W GLO2Q05584 274 aa5.19□□□□□ -1.58
VMS1YDR049W ECI1Q05871 280 aa5.19□□□□□ -1.58
VMS1YDR049W YDL086WQ07505 273 aa5.19□□□□□ -1.58
VMS1YDR049W YCT1Q12235 531 aa5.19□□□□□ -1.58
VMS1YDR049W RDI1Q12434 202 aa5.19□□□□□ -1.58
VMS1YDR049W POF1P25576 258 aa5.18□□□□□ -1.58
VMS1YDR049W YCR101CP25607 182 aa5.18□□□□□ -1.58
VMS1YDR049W SEC1P30619 724 aaKnown RBP5.18□□□□□ -1.58
VMS1YDR049W HOM6P31116 359 aaKnown RBP5.18□□□□□ -1.58
VMS1YDR049W RAD5P32849 1169 aaPredicted RBP5.18□□□□□ -1.58
VMS1YDR049W RPS1AP33442 255 aaKnown RBP5.18□□□□□ -1.58
VMS1YDR049W CBP4P37267 147 aa5.18□□□□□ -1.58
VMS1YDR049W YBR241CP38142 488 aa5.18□□□□□ -1.58
VMS1YDR049W YIP4P53093 235 aa5.18□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 19.2 ms