RNA–Protein interactions for RNA: YCR018C

SRD1, Protein involved in the processing of pre-rRNA to mature rRNA, yeastyeast

Gene SRD1, Length 666 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRD1YCR018C TIP20P33891 701 aa2.37□□□□□ -2.03
SRD1YCR018C MRPL37P36532 105 aa2.37□□□□□ -2.03
SRD1YCR018C FMP48P53233 369 aa2.37□□□□□ -2.03
SRD1YCR018C GMC1Q04399 608 aa2.37□□□□□ -2.03
SRD1YCR018C PRP46Q12417 451 aaPredicted RBP2.37□□□□□ -2.03
SRD1YCR018C FLO11P08640 1367 aa2.36□□□□□ -2.03
SRD1YCR018C SOD1P00445 154 aaKnown RBP2.36□□□□□ -2.03
SRD1YCR018C ATP6P00854 259 aa2.36□□□□□ -2.03
SRD1YCR018C TPI1P00942 248 aaKnown RBP2.36□□□□□ -2.03
SRD1YCR018C CYM1P32898 989 aa2.36□□□□□ -2.03
SRD1YCR018C RPC37P36121 282 aa2.36□□□□□ -2.03
SRD1YCR018C YPC1P38298 316 aa2.36□□□□□ -2.03
SRD1YCR018C YIL054WP40524 105 aa2.36□□□□□ -2.03
SRD1YCR018C UBC13P52490 153 aa2.36□□□□□ -2.03
SRD1YCR018C RPN14P53196 417 aa2.36□□□□□ -2.03
SRD1YCR018C YNR066CP53752 436 aa2.36□□□□□ -2.03
SRD1YCR018C YLR446WQ06204 433 aa2.36□□□□□ -2.03
SRD1YCR018C MIM1Q08176 113 aa2.36□□□□□ -2.03
SRD1YCR018C YAL067W-AQ8TGK6 75 aa2.36□□□□□ -2.03
SRD1YCR018C TY1B-DR4Q07793 1604 aa2.35□□□□□ -2.03
SRD1YCR018C RPL24AP04449 155 aaKnown RBP2.35□□□□□ -2.03
SRD1YCR018C HPR1P17629 752 aaKnown RBP2.35□□□□□ -2.03
SRD1YCR018C VPS1P21576 704 aaKnown RBP2.35□□□□□ -2.03
SRD1YCR018C MRPL6P32904 214 aa2.35□□□□□ -2.03
SRD1YCR018C SLM1P40485 686 aa2.35□□□□□ -2.03
SRD1YCR018C GDS1P41913 522 aa2.35□□□□□ -2.03
SRD1YCR018C COQ5P49017 307 aa2.35□□□□□ -2.03
SRD1YCR018C FLC3P53121 802 aa2.35□□□□□ -2.03
SRD1YCR018C MPP6P53725 186 aaPredicted RBP2.35□□□□□ -2.03
SRD1YCR018C LAP3Q01532 483 aaKnown RBP RIP-Chip data2.35□□□□□ -2.03not detected
SRD1YCR018C YMR244WQ04018 355 aa2.35□□□□□ -2.03
SRD1YCR018C CSI1Q04368 295 aa2.35□□□□□ -2.03
SRD1YCR018C MRX8Q05473 314 aa2.35□□□□□ -2.03
SRD1YCR018C YDR018CQ12185 396 aa2.35□□□□□ -2.03
SRD1YCR018C TIR4Q12218 487 aaPredicted RBP2.35□□□□□ -2.03
SRD1YCR018C TFS1P14306 219 aa2.34□□□□□ -2.03
SRD1YCR018C FRS2P15625 503 aaKnown RBP2.34□□□□□ -2.03
SRD1YCR018C CDC13P32797 924 aaKnown RBP2.34□□□□□ -2.03
SRD1YCR018C IMP3P32899 183 aaPredicted RBP2.34□□□□□ -2.03
SRD1YCR018C SKG6P32900 734 aaPredicted RBP2.34□□□□□ -2.03
SRD1YCR018C ZRT3P34240 503 aa2.34□□□□□ -2.03
SRD1YCR018C TPO5P36029 618 aa2.34□□□□□ -2.03
SRD1YCR018C MIC19P43594 170 aa2.34□□□□□ -2.03
SRD1YCR018C YGL118CP53132 145 aa2.34□□□□□ -2.03
SRD1YCR018C CPD1P53314 239 aa2.34□□□□□ -2.03
SRD1YCR018C SPP2Q02521 185 aa2.34□□□□□ -2.03
SRD1YCR018C YMR209CQ03648 457 aa2.34□□□□□ -2.03
SRD1YCR018C YOR292CQ08743 309 aa2.34□□□□□ -2.03
SRD1YCR018C YPL278CQ08990 100 aa2.34□□□□□ -2.03
SRD1YCR018C RRP36Q12481 300 aaPredicted RBP2.34□□□□□ -2.03
SRD1YCR018C AUS1Q08409 1394 aa2.34□□□□□ -2.04
SRD1YCR018C SPT4P32914 102 aaPredicted RBP2.33□□□□□ -2.04
SRD1YCR018C DBP7P36120 742 aaKnown RBP2.33□□□□□ -2.04
SRD1YCR018C RCY1P39531 840 aa2.33□□□□□ -2.04
SRD1YCR018C SHQ1P40486 507 aaPredicted RBP2.33□□□□□ -2.04
SRD1YCR018C UFE1P41834 346 aa2.33□□□□□ -2.04
SRD1YCR018C MPP10P47083 593 aaKnown RBP2.33□□□□□ -2.04
SRD1YCR018C YGR067CP53243 804 aa2.33□□□□□ -2.04
SRD1YCR018C SEC13Q04491 297 aaKnown RBP2.33□□□□□ -2.04
SRD1YCR018C ARC18Q05933 178 aaKnown RBP2.33□□□□□ -2.04
SRD1YCR018C PEX30Q06169 523 aa2.33□□□□□ -2.04
SRD1YCR018C YOL085CQ99345 113 aa2.33□□□□□ -2.04
SRD1YCR018C SSK22P25390 1331 aaPredicted RBP2.33□□□□□ -2.04
SRD1YCR018C KOG1P38873 1557 aa2.32□□□□□ -2.04
SRD1YCR018C CKA2P19454 339 aa2.32□□□□□ -2.04
SRD1YCR018C GCG1P32656 232 aaKnown RBP2.32□□□□□ -2.04
SRD1YCR018C YUH1P35127 236 aa2.32□□□□□ -2.04
SRD1YCR018C AIM29P36154 155 aa2.32□□□□□ -2.04
SRD1YCR018C PET100P38958 111 aa2.32□□□□□ -2.04
SRD1YCR018C FMP33P46998 180 aa2.32□□□□□ -2.04
SRD1YCR018C YPT32P51996 222 aaKnown RBP2.32□□□□□ -2.04
SRD1YCR018C ATC1Q04005 294 aa2.32□□□□□ -2.04
SRD1YCR018C DPP1Q05521 289 aa2.32□□□□□ -2.04
SRD1YCR018C KAP95Q06142 861 aaKnown RBP2.32□□□□□ -2.04
SRD1YCR018C GMC2Q06201 188 aa2.32□□□□□ -2.04
SRD1YCR018C TAZ1Q06510 381 aa2.32□□□□□ -2.04
SRD1YCR018C YLL007CQ07799 665 aa2.32□□□□□ -2.04
SRD1YCR018C TRM10Q12400 293 aa2.32□□□□□ -2.04
SRD1YCR018C FUS3P16892 353 aaKnown RBP2.31□□□□□ -2.04
SRD1YCR018C IMP1P28627 190 aa2.31□□□□□ -2.04
SRD1YCR018C GPX1P36014 167 aa2.31□□□□□ -2.04
SRD1YCR018C FRT2P39734 528 aa2.31□□□□□ -2.04
SRD1YCR018C VAB2P40003 282 aa2.31□□□□□ -2.04
SRD1YCR018C EDC2P40023 145 aaPredicted RBP2.31□□□□□ -2.04
SRD1YCR018C KRE29P40026 464 aa2.31□□□□□ -2.04
SRD1YCR018C RRG9P40156 214 aa2.31□□□□□ -2.04
SRD1YCR018C YIL012WP40551 113 aa2.31□□□□□ -2.04
SRD1YCR018C ASG7P46993 209 aa2.31□□□□□ -2.04
SRD1YCR018C COG7P53195 279 aa2.31□□□□□ -2.04
SRD1YCR018C CAX4P53223 239 aa2.31□□□□□ -2.04
SRD1YCR018C BSC6Q08280 497 aa2.31□□□□□ -2.04
SRD1YCR018C YDL211CQ12121 372 aa2.31□□□□□ -2.04
SRD1YCR018C DFM1Q12743 341 aaKnown RBP2.31□□□□□ -2.04
SRD1YCR018C YBL111CQ3E7Y5 667 aa2.31□□□□□ -2.04
SRD1YCR018C SPT6P23615 1451 aaKnown RBP2.31□□□□□ -2.04
SRD1YCR018C HSL1P34244 1518 aa2.31□□□□□ -2.04
SRD1YCR018C TDH1P00360 332 aaKnown RBP2.3□□□□□ -2.04
SRD1YCR018C MET16P18408 261 aaPredicted RBP2.3□□□□□ -2.04
SRD1YCR018C DAL81P21657 970 aa2.3□□□□□ -2.04
SRD1YCR018C FRM2P37261 193 aa2.3□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 47 ms