RNA–Protein interactions for RNA: YBL103C

RTG3, Transcript of bHLH/Zip transcription factor for retrograde (RTG) and TOR pathways, yeastyeast

Gene RTG3, Length 1,461 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTG3YBL103C BUD13P46947 266 aaPredicted RBP2.49□□□□□ -2.01
RTG3YBL103C NUP84P52891 726 aa2.49□□□□□ -2.01
RTG3YBL103C MPP6P53725 186 aaPredicted RBP2.49□□□□□ -2.01
RTG3YBL103C CAB5Q03941 241 aa2.49□□□□□ -2.01
RTG3YBL103C STE23Q06010 1027 aa2.49□□□□□ -2.01
RTG3YBL103C RRT8Q08219 342 aa2.49□□□□□ -2.01
RTG3YBL103C CLP1Q08685 445 aaPredicted RBP2.49□□□□□ -2.01
RTG3YBL103C YKR032WP36127 104 aa2.48□□□□□ -2.01
RTG3YBL103C SPT8P38915 602 aa2.48□□□□□ -2.01
RTG3YBL103C EMC2P47133 292 aaKnown RBP2.48□□□□□ -2.01
RTG3YBL103C YGR266WP53326 701 aa2.48□□□□□ -2.01
RTG3YBL103C TLG1Q03322 224 aa2.48□□□□□ -2.01
RTG3YBL103C TRM10Q12400 293 aa2.48□□□□□ -2.01
RTG3YBL103C SPO24Q3E752 67 aa2.48□□□□□ -2.01
RTG3YBL103C YLL053CP0CD98 152 aa2.47□□□□□ -2.01
RTG3YBL103C KRE1P17260 313 aa2.47□□□□□ -2.01
RTG3YBL103C UGA1P17649 471 aa2.47□□□□□ -2.01
RTG3YBL103C DCC1P25559 380 aa2.47□□□□□ -2.01
RTG3YBL103C YKL070WP36087 169 aa2.47□□□□□ -2.01
RTG3YBL103C MED8P38304 223 aa2.47□□□□□ -2.01
RTG3YBL103C PRP39P39682 629 aaKnown RBP2.47□□□□□ -2.01
RTG3YBL103C RIB4P50861 169 aaPredicted RBP2.47□□□□□ -2.01
RTG3YBL103C YGL185CP53100 379 aa2.47□□□□□ -2.01
RTG3YBL103C VOA1P53262 265 aa2.47□□□□□ -2.01
RTG3YBL103C DBP6P53734 629 aaKnown RBP2.47□□□□□ -2.01
RTG3YBL103C ACT1P60010 375 aaKnown RBP2.47□□□□□ -2.01
RTG3YBL103C RGM1Q00453 211 aa2.47□□□□□ -2.01
RTG3YBL103C YDR114CQ04597 100 aa2.47□□□□□ -2.01
RTG3YBL103C MRX9Q07349 420 aaKnown RBP2.47□□□□□ -2.01
RTG3YBL103C IES3Q12345 250 aa2.47□□□□□ -2.01
RTG3YBL103C TDH2P00358 332 aaKnown RBP2.46□□□□□ -2.02
RTG3YBL103C TDH3P00359 332 aaKnown RBP RIP-Chip data2.46□□□□□ -2.02not detected
RTG3YBL103C TDH1P00360 332 aaKnown RBP2.46□□□□□ -2.02
RTG3YBL103C YPS1P32329 569 aa2.46□□□□□ -2.02
RTG3YBL103C BUD2P33314 1104 aa2.46□□□□□ -2.02
RTG3YBL103C PEX18P38855 283 aa2.46□□□□□ -2.02
RTG3YBL103C GCD14P46959 383 aaPredicted RBP2.46□□□□□ -2.02
RTG3YBL103C MND1P53102 219 aa2.46□□□□□ -2.02
RTG3YBL103C SPO19Q03029 223 aa2.46□□□□□ -2.02
RTG3YBL103C VAC14Q06708 880 aa2.46□□□□□ -2.02
RTG3YBL103C SAR1P20606 190 aaKnown RBP2.45□□□□□ -2.02
RTG3YBL103C COT1P32798 439 aa2.45□□□□□ -2.02
RTG3YBL103C TPO5P36029 618 aa2.45□□□□□ -2.02
RTG3YBL103C CTM1P38818 585 aa2.45□□□□□ -2.02
RTG3YBL103C YER084WP40057 128 aa2.45□□□□□ -2.02
RTG3YBL103C GTO1P48239 356 aa2.45□□□□□ -2.02
RTG3YBL103C RRG8Q06109 277 aa2.45□□□□□ -2.02
RTG3YBL103C ARV1Q06541 321 aa2.45□□□□□ -2.02
RTG3YBL103C TY3A-GQ12173 290 aa2.45□□□□□ -2.02
RTG3YBL103C PRM4Q12498 284 aa2.45□□□□□ -2.02
RTG3YBL103C DCP1Q12517 231 aaPredicted RBP2.45□□□□□ -2.02
RTG3YBL103C TY3A-IQ99219 290 aa2.45□□□□□ -2.02
RTG3YBL103C SSA3P09435 649 aaKnown RBP2.45□□□□□ -2.02
RTG3YBL103C RPL18AP0CX49 186 aaKnown RBP2.45□□□□□ -2.02
RTG3YBL103C RPL18BP0CX50 186 aaKnown RBP2.45□□□□□ -2.02
RTG3YBL103C PET8P38921 284 aa2.45□□□□□ -2.02
RTG3YBL103C LSB1P53281 241 aa2.45□□□□□ -2.02
RTG3YBL103C ERV41Q04651 352 aa2.45□□□□□ -2.02
RTG3YBL103C BUR2Q05949 395 aa2.45□□□□□ -2.02
RTG3YBL103C RDL2Q08742 149 aaKnown RBP2.45□□□□□ -2.02
RTG3YBL103C YDR262WQ12331 272 aa2.45□□□□□ -2.02
RTG3YBL103C PAA1Q12447 191 aaKnown RBP2.45□□□□□ -2.02
RTG3YBL103C CAR2P07991 424 aaKnown RBP2.44□□□□□ -2.02
RTG3YBL103C CDC42P19073 191 aa2.44□□□□□ -2.02
RTG3YBL103C MEK1P24719 497 aaPredicted RBP2.44□□□□□ -2.02
RTG3YBL103C ICL1P28240 557 aaPredicted RBP2.44□□□□□ -2.02
RTG3YBL103C RPT5P33297 434 aaKnown RBP2.44□□□□□ -2.02
RTG3YBL103C HSM3P38348 480 aa2.44□□□□□ -2.02
RTG3YBL103C BFR1P38934 470 aaKnown RBP RIP-Chip data2.44□□□□□ -2.02not detected
RTG3YBL103C LOC1P43586 204 aaPredicted RBP2.44□□□□□ -2.02
RTG3YBL103C LIA1P47120 325 aaKnown RBP2.44□□□□□ -2.02
RTG3YBL103C YNL040WP53960 456 aaPredicted RBP2.44□□□□□ -2.02
RTG3YBL103C CWC21Q03375 135 aaKnown RBP2.44□□□□□ -2.02
RTG3YBL103C ATC1Q04005 294 aa2.44□□□□□ -2.02
RTG3YBL103C YLL007CQ07799 665 aa2.44□□□□□ -2.02
RTG3YBL103C YOL107WQ12239 342 aa2.44□□□□□ -2.02
RTG3YBL103C ERP3Q12403 225 aa2.44□□□□□ -2.02
RTG3YBL103C RGS2Q99188 309 aa2.44□□□□□ -2.02
RTG3YBL103C NTG1P31378 399 aa2.43□□□□□ -2.02
RTG3YBL103C BTT1P40314 149 aaPredicted RBP2.43□□□□□ -2.02
RTG3YBL103C PXR1P53335 271 aaPredicted RBP2.43□□□□□ -2.02
RTG3YBL103C YNL050CP53952 270 aa2.43□□□□□ -2.02
RTG3YBL103C RUD3Q12234 484 aaKnown RBP2.43□□□□□ -2.02
RTG3YBL103C YPR1Q12458 312 aa2.43□□□□□ -2.02
RTG3YBL103C MRX4Q12467 430 aa2.43□□□□□ -2.02
RTG3YBL103C SNF6P18888 332 aa2.42□□□□□ -2.02
RTG3YBL103C MEI5P32489 222 aa2.42□□□□□ -2.02
RTG3YBL103C COY1P34237 679 aa2.42□□□□□ -2.02
RTG3YBL103C RPC25P35718 212 aa2.42□□□□□ -2.02
RTG3YBL103C MED6P38782 295 aa2.42□□□□□ -2.02
RTG3YBL103C FET3P38993 636 aa2.42□□□□□ -2.02
RTG3YBL103C EDC2P40023 145 aaPredicted RBP2.42□□□□□ -2.02
RTG3YBL103C YGR168CP53293 376 aa2.42□□□□□ -2.02
RTG3YBL103C YNR066CP53752 436 aa2.42□□□□□ -2.02
RTG3YBL103C CDD1Q06549 142 aa2.42□□□□□ -2.02
RTG3YBL103C DTD1Q07648 150 aaKnown RBP2.42□□□□□ -2.02
RTG3YBL103C FMP16Q12497 93 aa2.42□□□□□ -2.02
RTG3YBL103C RSR1P13856 272 aa2.41□□□□□ -2.02
RTG3YBL103C CSM1P25651 190 aa2.41□□□□□ -2.02
RTG3YBL103C CSE1P33307 960 aa2.41□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 60.6 ms