RNA–Protein interactions for RNA: ENST00000639083.1

TARDBP-230, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TARDBP, Length 2,269 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-230ENST00000639083 PACSIN1Q9BY11 444 aa11.72□□□□□ -0.53
TARDBP-230ENST00000639083 AZI2Q9H6S1 392 aa11.72□□□□□ -0.53
TARDBP-230ENST00000639083 PDGFCQ9NRA1 345 aa11.72□□□□□ -0.53
TARDBP-230ENST00000639083 SAR1BQ9Y6B6 198 aa11.72□□□□□ -0.53
TARDBP-230ENST00000639083 CCL15-CCL14A0A0B4J2E2 113 aa11.72□□□□□ -0.53
TARDBP-230ENST00000639083 F8VZ95 297 aa11.72□□□□□ -0.53
TARDBP-230ENST00000639083 NOP56O00567 594 aaKnown RBP11.72□□□□□ -0.53
TARDBP-230ENST00000639083 BUB1O43683 1085 aa11.72□□□□□ -0.53
TARDBP-230ENST00000639083 EVI5O60447 810 aa11.72□□□□□ -0.53
TARDBP-230ENST00000639083 PCNTO95613 3336 aa11.72□□□□□ -0.53
TARDBP-230ENST00000639083 CETPP11597 493 aa11.72□□□□□ -0.53
TARDBP-230ENST00000639083 SOX5P35711 763 aa11.72□□□□□ -0.53
TARDBP-230ENST00000639083 ARL2P36404 184 aa11.72□□□□□ -0.53
TARDBP-230ENST00000639083 CETN1Q12798 172 aa11.72□□□□□ -0.53
TARDBP-230ENST00000639083 CCL15Q16663 113 aa11.72□□□□□ -0.53
TARDBP-230ENST00000639083 ARHGAP44Q17R89 818 aa11.72□□□□□ -0.53
TARDBP-230ENST00000639083 CCDC62Q6P9F0 684 aa11.72□□□□□ -0.53
TARDBP-230ENST00000639083 KCNV1Q6PIU1 500 aa11.72□□□□□ -0.53
TARDBP-230ENST00000639083 TRIM50Q86XT4 487 aa11.72□□□□□ -0.53
TARDBP-230ENST00000639083 DNAAF5Q86Y56 855 aa11.72□□□□□ -0.53
TARDBP-230ENST00000639083 DHX37Q8IY37 1157 aaKnown RBP11.72□□□□□ -0.53
TARDBP-230ENST00000639083 SHCBP1Q8NEM2 672 aa11.72□□□□□ -0.53
TARDBP-230ENST00000639083 PARD3BQ8TEW8 1205 aa11.72□□□□□ -0.53
TARDBP-230ENST00000639083 COPS5Q92905 334 aa11.72□□□□□ -0.53
TARDBP-230ENST00000639083 GPR88Q9GZN0 384 aa11.72□□□□□ -0.53
TARDBP-230ENST00000639083 TMEM117Q9H0C3 514 aa11.72□□□□□ -0.53
TARDBP-230ENST00000639083 LUC7LQ9NQ29 371 aaKnown RBP11.72□□□□□ -0.53
TARDBP-230ENST00000639083 MYH9P35579 1960 aaKnown RBP11.72□□□□□ -0.53
TARDBP-230ENST00000639083 LRRIQ4A6NIV6 560 aa11.71□□□□□ -0.53
TARDBP-230ENST00000639083 UNCXA6NJT0 531 aa11.71□□□□□ -0.53
TARDBP-230ENST00000639083 TXNP10599 105 aaKnown RBP11.71□□□□□ -0.53
TARDBP-230ENST00000639083 GTF2A2P52657 109 aa11.71□□□□□ -0.53
TARDBP-230ENST00000639083 NAP1L1P55209 391 aaKnown RBP11.71□□□□□ -0.53
TARDBP-230ENST00000639083 MAP2K1Q02750 393 aaPredicted RBP11.71□□□□□ -0.53
TARDBP-230ENST00000639083 DRP2Q13474 957 aa11.71□□□□□ -0.53
TARDBP-230ENST00000639083 WHAMMP3Q1A5X7 153 aa11.71□□□□□ -0.53
TARDBP-230ENST00000639083 TXLNBQ8N3L3 684 aa11.71□□□□□ -0.53
TARDBP-230ENST00000639083 BRI3BPQ8WY22 251 aa11.71□□□□□ -0.53
TARDBP-230ENST00000639083 GOLGA1Q92805 767 aa11.71□□□□□ -0.53
TARDBP-230ENST00000639083 FBXL18Q96ME1 805 aa11.71□□□□□ -0.53
TARDBP-230ENST00000639083 SPATA33Q96N06 139 aa11.71□□□□□ -0.53
TARDBP-230ENST00000639083 PDCL3Q9H2J4 239 aa11.71□□□□□ -0.53
TARDBP-230ENST00000639083 RRAGCQ9HB90 399 aa11.71□□□□□ -0.53
TARDBP-230ENST00000639083 UBE2TQ9NPD8 197 aaPredicted RBP11.71□□□□□ -0.53
TARDBP-230ENST00000639083 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.71□□□□□ -0.531e-7■■■■□ 22.4
TARDBP-230ENST00000639083 KCNG1Q9UIX4 513 aa11.71□□□□□ -0.53
TARDBP-230ENST00000639083 NAGPAQ9UK23 515 aa11.71□□□□□ -0.53
TARDBP-230ENST00000639083 JRKLQ9Y4A0 524 aa11.71□□□□□ -0.53
TARDBP-230ENST00000639083 ANO9A1A5B4 782 aa11.71□□□□□ -0.54
TARDBP-230ENST00000639083 H0YCG3 227 aa11.71□□□□□ -0.54
TARDBP-230ENST00000639083 K7ERI5 159 aa11.71□□□□□ -0.54
TARDBP-230ENST00000639083 FOXN3O00409 490 aaPredicted RBP11.71□□□□□ -0.54
TARDBP-230ENST00000639083 P4HA2O15460 535 aa11.71□□□□□ -0.54
TARDBP-230ENST00000639083 RRP9O43818 475 aaKnown RBP11.71□□□□□ -0.54
TARDBP-230ENST00000639083 N4BP1O75113 896 aaKnown RBP11.71□□□□□ -0.54
TARDBP-230ENST00000639083 FERP16591 822 aa11.71□□□□□ -0.54
TARDBP-230ENST00000639083 KLRC1P26715 233 aa11.71□□□□□ -0.54
TARDBP-230ENST00000639083 NAMPTP43490 491 aa11.71□□□□□ -0.54
TARDBP-230ENST00000639083 MXI1P50539 228 aa11.71□□□□□ -0.54
TARDBP-230ENST00000639083 STRN3Q13033 797 aa11.71□□□□□ -0.54
TARDBP-230ENST00000639083 NAB2Q15742 525 aa11.71□□□□□ -0.54
TARDBP-230ENST00000639083 EPC2Q52LR7 807 aa11.71□□□□□ -0.54
TARDBP-230ENST00000639083 ALKBH5Q6P6C2 394 aaKnown RBP11.71□□□□□ -0.54
TARDBP-230ENST00000639083 ARHGEF19Q8IW93 802 aa11.71□□□□□ -0.54
TARDBP-230ENST00000639083 RNF10Q8N5U6 811 aaKnown RBP11.71□□□□□ -0.54
TARDBP-230ENST00000639083 DEPTORQ8TB45 409 aa11.71□□□□□ -0.54
TARDBP-230ENST00000639083 MORC4Q8TE76 937 aa11.71□□□□□ -0.54
TARDBP-230ENST00000639083 MFSD14AQ96MC6 490 aa11.71□□□□□ -0.54
TARDBP-230ENST00000639083 NOX5Q96PH1 765 aa11.71□□□□□ -0.54
TARDBP-230ENST00000639083 FAM213AQ9BRX8 229 aa11.71□□□□□ -0.54
TARDBP-230ENST00000639083 GBA2Q9HCG7 927 aaPredicted RBP11.71□□□□□ -0.54
TARDBP-230ENST00000639083 LRRIQ3A6PVS8 624 aaPredicted RBP11.7□□□□□ -0.54
TARDBP-230ENST00000639083 ZNF185O15231 689 aa11.7□□□□□ -0.54
TARDBP-230ENST00000639083 ZSCAN20P17040 1043 aaPredicted RBP11.7□□□□□ -0.54
TARDBP-230ENST00000639083 GARTP22102 1010 aa11.7□□□□□ -0.54
TARDBP-230ENST00000639083 ADORA2AP29274 412 aa11.7□□□□□ -0.54
TARDBP-230ENST00000639083 RFC5P40937 340 aa11.7□□□□□ -0.54
TARDBP-230ENST00000639083 LIG4P49917 911 aa11.7□□□□□ -0.54
TARDBP-230ENST00000639083 MCCD1P59942 119 aaPredicted RBP11.7□□□□□ -0.54
TARDBP-230ENST00000639083 CCNA1P78396 465 aa11.7□□□□□ -0.54
TARDBP-230ENST00000639083 GPD1LQ8N335 351 aa11.7□□□□□ -0.54
TARDBP-230ENST00000639083 ALS2CR12Q96Q35 445 aa11.7□□□□□ -0.54
TARDBP-230ENST00000639083 TOPORSQ9NS56 1045 aaPredicted RBP11.7□□□□□ -0.54
TARDBP-230ENST00000639083 ARID2Q68CP9 1835 aa11.7□□□□□ -0.54
TARDBP-230ENST00000639083 CTAGE15A4D2H0 777 aa11.7□□□□□ -0.54
TARDBP-230ENST00000639083 ASB14A6NK59 587 aa11.7□□□□□ -0.54
TARDBP-230ENST00000639083 DDX3XO00571 662 aaKnown RBP eCLIP11.7□□□□□ -0.541e-28■■■■■ 35.7
TARDBP-230ENST00000639083 MAFO75444 373 aaPredicted RBP11.7□□□□□ -0.54
TARDBP-230ENST00000639083 CELF2O95319 508 aaKnown RBP11.7□□□□□ -0.54
TARDBP-230ENST00000639083 CTAGE8P0CG41 777 aa11.7□□□□□ -0.54
TARDBP-230ENST00000639083 DLATP10515 647 aaKnown RBP11.7□□□□□ -0.54
TARDBP-230ENST00000639083 H2AFXP16104 143 aaPredicted RBP11.7□□□□□ -0.54
TARDBP-230ENST00000639083 CYP24A1Q07973 514 aa11.7□□□□□ -0.54
TARDBP-230ENST00000639083 ARMCX2Q7L311 632 aa11.7□□□□□ -0.54
TARDBP-230ENST00000639083 CTAGE6Q86UF2 777 aa11.7□□□□□ -0.54
TARDBP-230ENST00000639083 VPS36Q86VN1 386 aa11.7□□□□□ -0.54
TARDBP-230ENST00000639083 CTAGE4Q8IX94 777 aa11.7□□□□□ -0.54
TARDBP-230ENST00000639083 GPR161Q8N6U8 529 aaKnown RBP11.7□□□□□ -0.54
TARDBP-230ENST00000639083 GTF3C2Q8WUA4 911 aaPredicted RBP11.7□□□□□ -0.54
TARDBP-230ENST00000639083 PRPF31Q8WWY3 499 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms