RNA–Protein interactions for RNA: ENST00000636389.1

CACNA1A-225, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 8,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-225ENST00000636389 ZNF658Q5TYW1 1059 aaPredicted RBP18.56■□□□□ 0.56
CACNA1A-225ENST00000636389 VN1R5Q7Z5H4 357 aa18.56■□□□□ 0.56
CACNA1A-225ENST00000636389 TRIM62Q9BVG3 475 aa18.56■□□□□ 0.56
CACNA1A-225ENST00000636389 TNFAIP2Q03169 654 aa18.56■□□□□ 0.56
CACNA1A-225ENST00000636389 SH3TC2Q8TF17 1288 aa18.56■□□□□ 0.56
CACNA1A-225ENST00000636389 URB2Q14146 1524 aaKnown RBP18.56■□□□□ 0.56
CACNA1A-225ENST00000636389 SEMA3EO15041 775 aa18.56■□□□□ 0.56
CACNA1A-225ENST00000636389 TMEM270Q6UE05 265 aa18.56■□□□□ 0.56
CACNA1A-225ENST00000636389 GIMAP8Q8ND71 665 aaPredicted RBP18.56■□□□□ 0.56
CACNA1A-225ENST00000636389 PCSK1NQ9UHG2 260 aa18.56■□□□□ 0.56
CACNA1A-225ENST00000636389 NUP62P37198 522 aaPredicted RBP18.55■□□□□ 0.56
CACNA1A-225ENST00000636389 RARS2Q5T160 578 aaKnown RBP18.55■□□□□ 0.56
CACNA1A-225ENST00000636389 PPM1NQ8N819 430 aa18.55■□□□□ 0.56
CACNA1A-225ENST00000636389 CCDC17Q96LX7 622 aa18.55■□□□□ 0.56
CACNA1A-225ENST00000636389 PARVBQ9HBI1 364 aa18.55■□□□□ 0.56
CACNA1A-225ENST00000636389 TOPBP1Q92547 1522 aa18.55■□□□□ 0.56
CACNA1A-225ENST00000636389 ANGPT2O15123 496 aa18.55■□□□□ 0.56
CACNA1A-225ENST00000636389 ATP9BO43861 1147 aa18.55■□□□□ 0.56
CACNA1A-225ENST00000636389 MAPK6Q16659 721 aa18.55■□□□□ 0.56
CACNA1A-225ENST00000636389 ADAM22Q9P0K1 906 aa18.55■□□□□ 0.56
CACNA1A-225ENST00000636389 M0QYV0 167 aa18.55■□□□□ 0.56
CACNA1A-225ENST00000636389 GPS1Q13098 491 aa18.55■□□□□ 0.56
CACNA1A-225ENST00000636389 C17orf80Q9BSJ5 609 aa18.55■□□□□ 0.56
CACNA1A-225ENST00000636389 ZFYVE9O95405 1425 aa18.55■□□□□ 0.56
CACNA1A-225ENST00000636389 TRIM32Q13049 653 aa18.55■□□□□ 0.56
CACNA1A-225ENST00000636389 MFSD14CQ5VZR4 134 aa18.55■□□□□ 0.56
CACNA1A-225ENST00000636389 ANO5Q75V66 913 aa18.55■□□□□ 0.56
CACNA1A-225ENST00000636389 PKP3Q9Y446 797 aa18.55■□□□□ 0.56
CACNA1A-225ENST00000636389 RASSF9O75901 435 aa18.55■□□□□ 0.56
CACNA1A-225ENST00000636389 LDHAP00338 332 aaKnown RBP18.55■□□□□ 0.56
CACNA1A-225ENST00000636389 ANKS6Q68DC2 871 aa18.55■□□□□ 0.56
CACNA1A-225ENST00000636389 MRPS26Q9BYN8 205 aaKnown RBP18.55■□□□□ 0.56
CACNA1A-225ENST00000636389 USP19O94966 1318 aa18.55■□□□□ 0.56
CACNA1A-225ENST00000636389 FGGP02679 453 aa18.55■□□□□ 0.56
CACNA1A-225ENST00000636389 GRAMD1CQ8IYS0 662 aa18.55■□□□□ 0.56
CACNA1A-225ENST00000636389 FKBP9O95302 570 aa18.55■□□□□ 0.56
CACNA1A-225ENST00000636389 FKBP9P1Q75LS8 142 aa18.55■□□□□ 0.56
CACNA1A-225ENST00000636389 EXD1Q8NHP7 514 aa18.55■□□□□ 0.56
CACNA1A-225ENST00000636389 EMILIN3Q9NT22 766 aa18.55■□□□□ 0.56
CACNA1A-225ENST00000636389 CMA1P23946 247 aa18.54■□□□□ 0.56
CACNA1A-225ENST00000636389 EIF4A3P38919 411 aaKnown RBP18.54■□□□□ 0.56
CACNA1A-225ENST00000636389 MTMR1Q13613 665 aa18.54■□□□□ 0.56
CACNA1A-225ENST00000636389 SATB2Q9UPW6 733 aa18.54■□□□□ 0.56
CACNA1A-225ENST00000636389 KCNH4Q9UQ05 1017 aa18.54■□□□□ 0.56
CACNA1A-225ENST00000636389 PRRG1O14668 218 aa18.54■□□□□ 0.56
CACNA1A-225ENST00000636389 FAM162AQ96A26 154 aa18.54■□□□□ 0.56
CACNA1A-225ENST00000636389 PGBD4Q96DM1 585 aa18.54■□□□□ 0.56
CACNA1A-225ENST00000636389 QTRT2Q9H974 415 aaKnown RBP18.54■□□□□ 0.56
CACNA1A-225ENST00000636389 MRPS25P82663 173 aaKnown RBP18.54■□□□□ 0.56
CACNA1A-225ENST00000636389 BTBD8Q5XKL5 378 aa18.54■□□□□ 0.56
CACNA1A-225ENST00000636389 ECT2Q9H8V3 914 aa18.54■□□□□ 0.56
CACNA1A-225ENST00000636389 NFU1Q9UMS0 254 aa18.54■□□□□ 0.56
CACNA1A-225ENST00000636389 ROR1Q01973 937 aa18.54■□□□□ 0.56
CACNA1A-225ENST00000636389 ARHGEF7Q14155 803 aa18.54■□□□□ 0.56
CACNA1A-225ENST00000636389 LUZP2Q86TE4 346 aa18.54■□□□□ 0.56
CACNA1A-225ENST00000636389 AHI1Q8N157 1196 aa18.54■□□□□ 0.56
CACNA1A-225ENST00000636389 SAAL1Q96ER3 474 aa18.54■□□□□ 0.56
CACNA1A-225ENST00000636389 BBS2Q9BXC9 721 aa18.54■□□□□ 0.56
CACNA1A-225ENST00000636389 PCDHA7Q9UN72 937 aa18.54■□□□□ 0.56
CACNA1A-225ENST00000636389 ABCC4O15439 1325 aa18.54■□□□□ 0.56
CACNA1A-225ENST00000636389 EFHC2Q5JST6 749 aa18.54■□□□□ 0.56
CACNA1A-225ENST00000636389 PCDHGA4Q9Y5G9 962 aa18.54■□□□□ 0.56
CACNA1A-225ENST00000636389 HIST1H2AGP0C0S8 130 aaPredicted RBP18.54■□□□□ 0.56
CACNA1A-225ENST00000636389 HIST1H2ADP20671 130 aa18.54■□□□□ 0.56
CACNA1A-225ENST00000636389 HIST1H2AHQ96KK5 128 aa18.54■□□□□ 0.56
CACNA1A-225ENST00000636389 PIGSQ96S52 555 aa18.54■□□□□ 0.56
CACNA1A-225ENST00000636389 HIST1H2AJQ99878 128 aa18.54■□□□□ 0.56
CACNA1A-225ENST00000636389 H2AFJQ9BTM1 129 aa18.54■□□□□ 0.56
CACNA1A-225ENST00000636389 RPRD1BQ9NQG5 326 aaKnown RBP18.54■□□□□ 0.56
CACNA1A-225ENST00000636389 YEATS2Q9ULM3 1422 aa18.53■□□□□ 0.56
CACNA1A-225ENST00000636389 GUCY1A3Q02108 690 aa18.53■□□□□ 0.56
CACNA1A-225ENST00000636389 ZC3H7BQ9UGR2 993 aaKnown RBP18.53■□□□□ 0.56
CACNA1A-225ENST00000636389 CDC23Q9UJX2 597 aa18.53■□□□□ 0.56
CACNA1A-225ENST00000636389 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.53■□□□□ 0.56
CACNA1A-225ENST00000636389 ERBB3P21860 1342 aa18.53■□□□□ 0.56
CACNA1A-225ENST00000636389 FYNP06241 537 aa18.53■□□□□ 0.56
CACNA1A-225ENST00000636389 EIF3BP55884 814 aaKnown RBP18.53■□□□□ 0.56
CACNA1A-225ENST00000636389 DPYDQ12882 1025 aa18.53■□□□□ 0.56
CACNA1A-225ENST00000636389 TMA16Q96EY4 203 aaKnown RBP18.53■□□□□ 0.56
CACNA1A-225ENST00000636389 BRD8Q9H0E9 1235 aa18.53■□□□□ 0.56
CACNA1A-225ENST00000636389 PKD2L2Q9NZM6 624 aa18.53■□□□□ 0.56
CACNA1A-225ENST00000636389 PLAAQ9Y263 795 aa18.53■□□□□ 0.56
CACNA1A-225ENST00000636389 P4HA2O15460 535 aa18.53■□□□□ 0.56
CACNA1A-225ENST00000636389 CHSY1Q86X52 802 aa18.53■□□□□ 0.56
CACNA1A-225ENST00000636389 SLC25A13Q9UJS0 675 aa18.53■□□□□ 0.56
CACNA1A-225ENST00000636389 PRXQ9BXM0 1461 aa18.53■□□□□ 0.56
CACNA1A-225ENST00000636389 ASAP2O43150 1006 aa18.53■□□□□ 0.56
CACNA1A-225ENST00000636389 PLCG1P19174 1290 aa18.53■□□□□ 0.56
CACNA1A-225ENST00000636389 MAPRE1Q15691 268 aaKnown RBP18.53■□□□□ 0.56
CACNA1A-225ENST00000636389 MMP19Q99542 508 aa18.53■□□□□ 0.56
CACNA1A-225ENST00000636389 SLC44A4Q53GD3 710 aa18.53■□□□□ 0.56
CACNA1A-225ENST00000636389 SGO1Q5FBB7 561 aa18.53■□□□□ 0.56
CACNA1A-225ENST00000636389 DGKHQ86XP1 1220 aa18.53■□□□□ 0.56
CACNA1A-225ENST00000636389 SH3GL3Q99963 347 aa18.53■□□□□ 0.56
CACNA1A-225ENST00000636389 KANSL2Q9H9L4 492 aa18.53■□□□□ 0.56
CACNA1A-225ENST00000636389 SOX13Q9UN79 622 aa18.53■□□□□ 0.56
CACNA1A-225ENST00000636389 USP17L3A6NCW0 530 aa18.53■□□□□ 0.56
CACNA1A-225ENST00000636389 USP17L4A6NCW7 530 aa18.53■□□□□ 0.56
CACNA1A-225ENST00000636389 KLHL18O94889 574 aa18.53■□□□□ 0.56
CACNA1A-225ENST00000636389 KRT75O95678 551 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms