RNA–Protein interactions for RNA: ENST00000620502.4

BRCC3-209, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 882 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-209ENST00000620502 SNX21Q969T3 373 aa7.33□□□□□ -1.24
BRCC3-209ENST00000620502 ZCCHC2Q9C0B9 1178 aaKnown RBP7.33□□□□□ -1.24
BRCC3-209ENST00000620502 TMEM60Q9H2L4 133 aa7.33□□□□□ -1.24
BRCC3-209ENST00000620502 CXXC1Q9P0U4 656 aaPredicted RBP7.33□□□□□ -1.24
BRCC3-209ENST00000620502 TUBE1Q9UJT0 475 aa7.33□□□□□ -1.24
BRCC3-209ENST00000620502 SMC3Q9UQE7 1217 aa7.33□□□□□ -1.24
BRCC3-209ENST00000620502 HCN4Q9Y3Q4 1203 aa7.33□□□□□ -1.24
BRCC3-209ENST00000620502 SAMM50Q9Y512 469 aa7.33□□□□□ -1.24
BRCC3-209ENST00000620502 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.33□□□□□ -1.24
BRCC3-209ENST00000620502 PCDHA2Q9Y5H9 948 aa7.33□□□□□ -1.24
BRCC3-209ENST00000620502 COL1A2P08123 1366 aa7.33□□□□□ -1.24
BRCC3-209ENST00000620502 SMIM35A0A1B0GVV1 85 aa7.32□□□□□ -1.24
BRCC3-209ENST00000620502 K7ELQ4 463 aaPredicted RBP7.32□□□□□ -1.24
BRCC3-209ENST00000620502 NEMFO60524 1076 aa7.32□□□□□ -1.24
BRCC3-209ENST00000620502 BAG4O95429 457 aaKnown RBP7.32□□□□□ -1.24
BRCC3-209ENST00000620502 PARNO95453 639 aaKnown RBP7.32□□□□□ -1.24
BRCC3-209ENST00000620502 CHRNA1P02708 482 aa7.32□□□□□ -1.24
BRCC3-209ENST00000620502 PFKMP08237 780 aa7.32□□□□□ -1.24
BRCC3-209ENST00000620502 ATP2B1P20020 1258 aa7.32□□□□□ -1.24
BRCC3-209ENST00000620502 KLRC1P26715 233 aa7.32□□□□□ -1.24
BRCC3-209ENST00000620502 MCM7P33993 719 aa7.32□□□□□ -1.24
BRCC3-209ENST00000620502 TXKP42681 527 aa7.32□□□□□ -1.24
BRCC3-209ENST00000620502 TRAPPC10P48553 1259 aa7.32□□□□□ -1.24
BRCC3-209ENST00000620502 SRSF11Q05519 484 aaKnown RBP7.32□□□□□ -1.24
BRCC3-209ENST00000620502 MGAT3Q09327 533 aa7.32□□□□□ -1.24
BRCC3-209ENST00000620502 EPHA7Q15375 998 aa7.32□□□□□ -1.24
BRCC3-209ENST00000620502 TARBP2Q15633 366 aaKnown RBP7.32□□□□□ -1.24
BRCC3-209ENST00000620502 ZNF174Q15697 407 aa7.32□□□□□ -1.24
BRCC3-209ENST00000620502 CALCRLQ16602 461 aa7.32□□□□□ -1.24
BRCC3-209ENST00000620502 TMEM164Q5U3C3 297 aa7.32□□□□□ -1.24
BRCC3-209ENST00000620502 LARP1BQ659C4 914 aaKnown RBP7.32□□□□□ -1.24
BRCC3-209ENST00000620502 FAM109BQ6ICB4 259 aaPredicted RBP7.32□□□□□ -1.24
BRCC3-209ENST00000620502 TAF2Q6P1X5 1199 aa7.32□□□□□ -1.24
BRCC3-209ENST00000620502 OTOP2Q7RTS6 562 aa7.32□□□□□ -1.24
BRCC3-209ENST00000620502 TRMT1LQ7Z2T5 733 aaKnown RBP7.32□□□□□ -1.24
BRCC3-209ENST00000620502 CKAP2LQ8IYA6 745 aa7.32□□□□□ -1.24
BRCC3-209ENST00000620502 DNAJB3Q8WWF6 145 aa7.32□□□□□ -1.24
BRCC3-209ENST00000620502 INTS4Q96HW7 963 aaKnown RBP7.32□□□□□ -1.24
BRCC3-209ENST00000620502 RNPC3Q96LT9 517 aaKnown RBP7.32□□□□□ -1.24
BRCC3-209ENST00000620502 CEP89Q96ST8 783 aa7.32□□□□□ -1.24
BRCC3-209ENST00000620502 PHACTR1Q9C0D0 580 aa7.32□□□□□ -1.24
BRCC3-209ENST00000620502 NRBP2Q9NSY0 501 aa7.32□□□□□ -1.24
BRCC3-209ENST00000620502 WRAP73Q9P2S5 460 aaPredicted RBP7.32□□□□□ -1.24
BRCC3-209ENST00000620502 TCEAL9Q9UHQ7 104 aa7.32□□□□□ -1.24
BRCC3-209ENST00000620502 ATXN7L1Q9ULK2 861 aaPredicted RBP7.32□□□□□ -1.24
BRCC3-209ENST00000620502 PCDHA12Q9UN75 941 aa7.32□□□□□ -1.24
BRCC3-209ENST00000620502 KIF3AQ9Y496 699 aa7.32□□□□□ -1.24
BRCC3-209ENST00000620502 PCDHGC4Q9Y5F7 938 aa7.32□□□□□ -1.24
BRCC3-209ENST00000620502 PTPRSQ13332 1948 aa7.32□□□□□ -1.24
BRCC3-209ENST00000620502 TET1Q8NFU7 2136 aa7.31□□□□□ -1.24
BRCC3-209ENST00000620502 LOXHD1Q8IVV2 1947 aa7.31□□□□□ -1.24
BRCC3-209ENST00000620502 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.31□□□□□ -1.24
BRCC3-209ENST00000620502 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.31□□□□□ -1.24
BRCC3-209ENST00000620502 TMEM150BA6NC51 233 aa7.31□□□□□ -1.24
BRCC3-209ENST00000620502 GRXCR1A8MXD5 290 aa7.31□□□□□ -1.24
BRCC3-209ENST00000620502 ATXN7O15265 892 aaPredicted RBP7.31□□□□□ -1.24
BRCC3-209ENST00000620502 MARCH6O60337 910 aa7.31□□□□□ -1.24
BRCC3-209ENST00000620502 SLITRK3O94933 977 aa7.31□□□□□ -1.24
BRCC3-209ENST00000620502 C22orf31O95567 290 aa7.31□□□□□ -1.24
BRCC3-209ENST00000620502 P4HBP07237 508 aaKnown RBP7.31□□□□□ -1.24
BRCC3-209ENST00000620502 CTSHP09668 335 aa7.31□□□□□ -1.24
BRCC3-209ENST00000620502 PSMC5P62195 406 aa7.31□□□□□ -1.24
BRCC3-209ENST00000620502 SMAD3P84022 425 aaKnown RBP7.31□□□□□ -1.24
BRCC3-209ENST00000620502 PRKCEQ02156 737 aa7.31□□□□□ -1.24
BRCC3-209ENST00000620502 ORC2Q13416 577 aaPredicted RBP7.31□□□□□ -1.24
BRCC3-209ENST00000620502 GNL2Q13823 731 aaKnown RBP7.31□□□□□ -1.24
BRCC3-209ENST00000620502 PLEKHG4Q58EX7 1191 aa7.31□□□□□ -1.24
BRCC3-209ENST00000620502 XKR3Q5GH77 459 aa7.31□□□□□ -1.24
BRCC3-209ENST00000620502 TTC38Q5R3I4 469 aa7.31□□□□□ -1.24
BRCC3-209ENST00000620502 SAMD5Q5TGI4 173 aa7.31□□□□□ -1.24
BRCC3-209ENST00000620502 NCAPH2Q6IBW4 605 aa7.31□□□□□ -1.24
BRCC3-209ENST00000620502 CNKSR3Q6P9H4 555 aa7.31□□□□□ -1.24
BRCC3-209ENST00000620502 ANO5Q75V66 913 aa7.31□□□□□ -1.24
BRCC3-209ENST00000620502 ALDH16A1Q8IZ83 802 aa7.31□□□□□ -1.24
BRCC3-209ENST00000620502 KIAA0319LQ8IZA0 1049 aa7.31□□□□□ -1.24
BRCC3-209ENST00000620502 LINC01465Q8N7H1 131 aa7.31□□□□□ -1.24
BRCC3-209ENST00000620502 GBF1Q92538 1859 aa7.31□□□□□ -1.24
BRCC3-209ENST00000620502 EVPLQ92817 2033 aa7.31□□□□□ -1.24
BRCC3-209ENST00000620502 ABHD17AQ96GS6 310 aa7.31□□□□□ -1.24
BRCC3-209ENST00000620502 DYDC2Q96IM9 177 aa7.31□□□□□ -1.24
BRCC3-209ENST00000620502 FAM167AQ96KS9 214 aa7.31□□□□□ -1.24
BRCC3-209ENST00000620502 HSD17B14Q9BPX1 270 aa7.31□□□□□ -1.24
BRCC3-209ENST00000620502 FTOQ9C0B1 505 aaKnown RBP eCLIP7.31□□□□□ -1.24
BRCC3-209ENST00000620502 TTC12Q9H892 705 aaPredicted RBP7.31□□□□□ -1.24
BRCC3-209ENST00000620502 RGL1Q9NZL6 768 aa7.31□□□□□ -1.24
BRCC3-209ENST00000620502 HCN2Q9UL51 889 aa7.31□□□□□ -1.24
BRCC3-209ENST00000620502 PCDHB6Q9Y5E3 794 aa7.31□□□□□ -1.24
BRCC3-209ENST00000620502 ARID2Q68CP9 1835 aa7.3□□□□□ -1.24
BRCC3-209ENST00000620502 IGKV6-21A0A0C4DH24 114 aa7.3□□□□□ -1.24
BRCC3-209ENST00000620502 H3BQV1 296 aa7.3□□□□□ -1.24
BRCC3-209ENST00000620502 ZBTB39O15060 712 aa7.3□□□□□ -1.24
BRCC3-209ENST00000620502 MAGEB2O15479 319 aa7.3□□□□□ -1.24
BRCC3-209ENST00000620502 SPATA31C1P0DKV0 1188 aa7.3□□□□□ -1.24
BRCC3-209ENST00000620502 MX2P20592 715 aa7.3□□□□□ -1.24
BRCC3-209ENST00000620502 SYT1P21579 422 aa7.3□□□□□ -1.24
BRCC3-209ENST00000620502 TECP42680 631 aa7.3□□□□□ -1.24
BRCC3-209ENST00000620502 QARSP47897 775 aaKnown RBP7.3□□□□□ -1.24
BRCC3-209ENST00000620502 MRPS6P82932 125 aaKnown RBP7.3□□□□□ -1.24
BRCC3-209ENST00000620502 TMEM62Q0P6H9 643 aa7.3□□□□□ -1.24
BRCC3-209ENST00000620502 CTTNQ14247 550 aaKnown RBP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms