RNA–Protein interactions for RNA: ENST00000571212.1

KARSP3-201, Transcript of lysyl-tRNA synthetase pseudogene 3, humanhuman

BASIC

Gene KARSP3, Length 1,504 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARSP3-201ENST00000571212 PHACTR3Q96KR7 559 aa6.17□□□□□ -1.42
KARSP3-201ENST00000571212 IPPKQ9H8X2 491 aa6.17□□□□□ -1.42
KARSP3-201ENST00000571212 HACL1Q9UJ83 578 aa6.17□□□□□ -1.42
KARSP3-201ENST00000571212 ZDHHC9Q9Y397 364 aa6.17□□□□□ -1.42
KARSP3-201ENST00000571212 USP16Q9Y5T5 823 aa6.17□□□□□ -1.42
KARSP3-201ENST00000571212 TRPM7Q96QT4 1865 aa6.16□□□□□ -1.42
KARSP3-201ENST00000571212 ZNF541Q9H0D2 1346 aa6.16□□□□□ -1.42
KARSP3-201ENST00000571212 NUP98P52948 1817 aa6.16□□□□□ -1.42
KARSP3-201ENST00000571212 CCDC85CA6NKD9 419 aa6.16□□□□□ -1.42
KARSP3-201ENST00000571212 FZD9O00144 591 aa6.16□□□□□ -1.42
KARSP3-201ENST00000571212 LAMTOR5O43504 91 aa6.16□□□□□ -1.42
KARSP3-201ENST00000571212 HTATSF1O43719 755 aaKnown RBP6.16□□□□□ -1.42
KARSP3-201ENST00000571212 SOD2P04179 222 aa6.16□□□□□ -1.42
KARSP3-201ENST00000571212 ALDH1B1P30837 517 aa6.16□□□□□ -1.42
KARSP3-201ENST00000571212 EPHX2P34913 555 aa6.16□□□□□ -1.42
KARSP3-201ENST00000571212 GLRBP48167 497 aa6.16□□□□□ -1.42
KARSP3-201ENST00000571212 GPR85P60893 370 aa6.16□□□□□ -1.42
KARSP3-201ENST00000571212 KIZQ2M2Z5 673 aa6.16□□□□□ -1.42
KARSP3-201ENST00000571212 PAN2Q504Q3 1202 aaKnown RBP6.16□□□□□ -1.42
KARSP3-201ENST00000571212 NAALADL2Q58DX5 795 aa6.16□□□□□ -1.42
KARSP3-201ENST00000571212 VASNQ6EMK4 673 aa6.16□□□□□ -1.42
KARSP3-201ENST00000571212 GLB1LQ6UWU2 654 aa6.16□□□□□ -1.42
KARSP3-201ENST00000571212 PNMA8AQ86V59 439 aaPredicted RBP6.16□□□□□ -1.42
KARSP3-201ENST00000571212 TRIM48Q8IWZ4 208 aa6.16□□□□□ -1.42
KARSP3-201ENST00000571212 KBTBD2Q8IY47 623 aa6.16□□□□□ -1.42
KARSP3-201ENST00000571212 IFNL3Q8IZI9 196 aa6.16□□□□□ -1.42
KARSP3-201ENST00000571212 UHMK1Q8TAS1 419 aaKnown RBP6.16□□□□□ -1.42
KARSP3-201ENST00000571212 PNNQ9H307 717 aaKnown RBP6.16□□□□□ -1.42
KARSP3-201ENST00000571212 ZNF277Q9NRM2 450 aaPredicted RBP6.16□□□□□ -1.42
KARSP3-201ENST00000571212 PFDN2Q9UHV9 154 aa6.16□□□□□ -1.42
KARSP3-201ENST00000571212 TCRBV5S4A2TA0A5A2 114 aa6.15□□□□□ -1.42
KARSP3-201ENST00000571212 RASSF10A6NK89 507 aa6.15□□□□□ -1.42
KARSP3-201ENST00000571212 B4GALT4O60513 344 aa6.15□□□□□ -1.42
KARSP3-201ENST00000571212 U2AF1L5P0DN76 240 aaPredicted RBP6.15□□□□□ -1.42
KARSP3-201ENST00000571212 FAHP16930 419 aa6.15□□□□□ -1.42
KARSP3-201ENST00000571212 PRKAR2BP31323 418 aa6.15□□□□□ -1.42
KARSP3-201ENST00000571212 IARSP41252 1262 aaKnown RBP6.15□□□□□ -1.42
KARSP3-201ENST00000571212 PIP4K2AP48426 406 aaPredicted RBP6.15□□□□□ -1.42
KARSP3-201ENST00000571212 U2AF1Q01081 240 aaKnown RBP eCLIP6.15□□□□□ -1.42
KARSP3-201ENST00000571212 SPIRE1Q08AE8 756 aa6.15□□□□□ -1.42
KARSP3-201ENST00000571212 DEFB115Q30KQ5 88 aa6.15□□□□□ -1.42
KARSP3-201ENST00000571212 HABP4Q5JVS0 413 aaKnown RBP6.15□□□□□ -1.42
KARSP3-201ENST00000571212 FOXB2Q5VYV0 432 aa6.15□□□□□ -1.42
KARSP3-201ENST00000571212 CNTROBQ8N137 903 aa6.15□□□□□ -1.42
KARSP3-201ENST00000571212 LRRC47Q8N1G4 583 aaKnown RBP6.15□□□□□ -1.42
KARSP3-201ENST00000571212 SYNE4Q8N205 404 aa6.15□□□□□ -1.42
KARSP3-201ENST00000571212 NGEFQ8N5V2 710 aa6.15□□□□□ -1.42
KARSP3-201ENST00000571212 DTX3Q8N9I9 347 aa6.15□□□□□ -1.42
KARSP3-201ENST00000571212 TTLL11Q8NHH1 800 aa6.15□□□□□ -1.42
KARSP3-201ENST00000571212 RUNDC1Q96C34 613 aa6.15□□□□□ -1.42
KARSP3-201ENST00000571212 SAMD11Q96NU1 681 aa6.15□□□□□ -1.42
KARSP3-201ENST00000571212 PSMD1Q99460 953 aa6.15□□□□□ -1.42
KARSP3-201ENST00000571212 SPATA9Q9BWV2 254 aa6.15□□□□□ -1.42
KARSP3-201ENST00000571212 CD244Q9BZW8 370 aa6.15□□□□□ -1.42
KARSP3-201ENST00000571212 HSPBP1Q9NZL4 362 aa6.15□□□□□ -1.42
KARSP3-201ENST00000571212 FTSJ1Q9UET6 329 aa6.15□□□□□ -1.42
KARSP3-201ENST00000571212 DSEQ9UL01 958 aa6.15□□□□□ -1.42
KARSP3-201ENST00000571212 NIP7Q9Y221 180 aaKnown RBP eCLIP6.15□□□□□ -1.42
KARSP3-201ENST00000571212 LAMB4A4D0S4 1761 aa6.15□□□□□ -1.42
KARSP3-201ENST00000571212 ZNF521Q96K83 1311 aa6.15□□□□□ -1.43
KARSP3-201ENST00000571212 PRAMEF22A3QJZ6 481 aa6.15□□□□□ -1.43
KARSP3-201ENST00000571212 STK10O94804 968 aaKnown RBP6.15□□□□□ -1.43
KARSP3-201ENST00000571212 ZNF20P17024 532 aa6.15□□□□□ -1.43
KARSP3-201ENST00000571212 LBX1P52954 281 aa6.15□□□□□ -1.43
KARSP3-201ENST00000571212 MAP2K1Q02750 393 aaPredicted RBP6.15□□□□□ -1.43
KARSP3-201ENST00000571212 NFATC3Q12968 1075 aa6.15□□□□□ -1.43
KARSP3-201ENST00000571212 CNGB1Q14028 1251 aaPredicted RBP6.15□□□□□ -1.43
KARSP3-201ENST00000571212 SKIDA1Q1XH10 827 aa6.15□□□□□ -1.43
KARSP3-201ENST00000571212 OLFM4Q6UX06 510 aa6.15□□□□□ -1.43
KARSP3-201ENST00000571212 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.15□□□□□ -1.43
KARSP3-201ENST00000571212 GPC2Q8N158 579 aa6.15□□□□□ -1.43
KARSP3-201ENST00000571212 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.15□□□□□ -1.43
KARSP3-201ENST00000571212 SH3RF2Q8TEC5 729 aa6.15□□□□□ -1.43
KARSP3-201ENST00000571212 RTF1Q92541 710 aaKnown RBP6.15□□□□□ -1.43
KARSP3-201ENST00000571212 ZFP69BQ9UJL9 534 aa6.15□□□□□ -1.43
KARSP3-201ENST00000571212 MSRB2Q9Y3D2 182 aa6.15□□□□□ -1.43
KARSP3-201ENST00000571212 SNED1Q8TER0 1413 aa6.14□□□□□ -1.43
KARSP3-201ENST00000571212 RNF123Q5XPI4 1314 aa6.14□□□□□ -1.43
KARSP3-201ENST00000571212 WDR33Q9C0J8 1336 aaKnown RBP6.14□□□□□ -1.43
KARSP3-201ENST00000571212 ACOT7O00154 380 aa6.14□□□□□ -1.43
KARSP3-201ENST00000571212 GPR42O15529 346 aa6.14□□□□□ -1.43
KARSP3-201ENST00000571212 ADCY3O60266 1144 aa6.14□□□□□ -1.43
KARSP3-201ENST00000571212 CYP7B1O75881 506 aa6.14□□□□□ -1.43
KARSP3-201ENST00000571212 KLHL18O94889 574 aa6.14□□□□□ -1.43
KARSP3-201ENST00000571212 HSPA8P11142 646 aaKnown RBP6.14□□□□□ -1.43
KARSP3-201ENST00000571212 TMPOP42166 694 aaKnown RBP6.14□□□□□ -1.43
KARSP3-201ENST00000571212 PFKPQ01813 784 aa6.14□□□□□ -1.43
KARSP3-201ENST00000571212 ICAM4Q14773 271 aa6.14□□□□□ -1.43
KARSP3-201ENST00000571212 NFE2L2Q16236 605 aa6.14□□□□□ -1.43
KARSP3-201ENST00000571212 CRY2Q49AN0 593 aa6.14□□□□□ -1.43
KARSP3-201ENST00000571212 FAM209AQ5JX71 171 aa6.14□□□□□ -1.43
KARSP3-201ENST00000571212 CPZQ66K79 652 aa6.14□□□□□ -1.43
KARSP3-201ENST00000571212 PKN3Q6P5Z2 889 aa6.14□□□□□ -1.43
KARSP3-201ENST00000571212 STPG3Q8N7X2 389 aa6.14□□□□□ -1.43
KARSP3-201ENST00000571212 CHST13Q8NET6 341 aa6.14□□□□□ -1.43
KARSP3-201ENST00000571212 JDP2Q8WYK2 163 aa6.14□□□□□ -1.43
KARSP3-201ENST00000571212 BORCS6Q96GS4 357 aa6.14□□□□□ -1.43
KARSP3-201ENST00000571212 ZFYVE21Q9BQ24 234 aa6.14□□□□□ -1.43
KARSP3-201ENST00000571212 NYXQ9GZU5 481 aa6.14□□□□□ -1.43
KARSP3-201ENST00000571212 DLL4Q9NR61 685 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms