RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 SNX29Q8TEQ0 813 aa14.14□□□□□ -0.15
GPC1-204ENST00000426280 KHSRPQ92945 711 aaKnown RBP eCLIP14.14□□□□□ -0.15
GPC1-204ENST00000426280 KIFC3Q9BVG8 833 aa14.14□□□□□ -0.15
GPC1-204ENST00000426280 RUSC1Q9BVN2 902 aa14.14□□□□□ -0.15
GPC1-204ENST00000426280 TBC1D13Q9NVG8 400 aa14.14□□□□□ -0.15
GPC1-204ENST00000426280 CLDND1Q9NY35 253 aa14.14□□□□□ -0.15
GPC1-204ENST00000426280 INPP5FQ9Y2H2 1132 aa14.14□□□□□ -0.15
GPC1-204ENST00000426280 IPPQ9Y573 584 aa14.14□□□□□ -0.15
GPC1-204ENST00000426280 PCDHB12Q9Y5F1 795 aa14.14□□□□□ -0.15
GPC1-204ENST00000426280 MYH15Q9Y2K3 1946 aa14.13□□□□□ -0.15
GPC1-204ENST00000426280 ARHGEF35A5YM69 484 aa14.13□□□□□ -0.15
GPC1-204ENST00000426280 VWA3AA6NCI4 1184 aa14.13□□□□□ -0.15
GPC1-204ENST00000426280 LRRIQ4A6NIV6 560 aa14.13□□□□□ -0.15
GPC1-204ENST00000426280 HIDE1A8MVS5 230 aa14.13□□□□□ -0.15
GPC1-204ENST00000426280 TBX10O75333 385 aa14.13□□□□□ -0.15
GPC1-204ENST00000426280 LAG3P18627 525 aa14.13□□□□□ -0.15
GPC1-204ENST00000426280 BCAR1P56945 870 aa14.13□□□□□ -0.15
GPC1-204ENST00000426280 PLCB3Q01970 1234 aa14.13□□□□□ -0.15
GPC1-204ENST00000426280 MAPK7Q13164 816 aa14.13□□□□□ -0.15
GPC1-204ENST00000426280 CLUL1Q15846 466 aa14.13□□□□□ -0.15
GPC1-204ENST00000426280 NOMO2Q5JPE7 1267 aa14.13□□□□□ -0.15
GPC1-204ENST00000426280 DTHD1Q6ZMT9 781 aa14.13□□□□□ -0.15
GPC1-204ENST00000426280 ABI1Q8IZP0 508 aa14.13□□□□□ -0.15
GPC1-204ENST00000426280 LRRC43Q8N309 656 aa14.13□□□□□ -0.15
GPC1-204ENST00000426280 ERMNQ8TAM6 284 aa14.13□□□□□ -0.15
GPC1-204ENST00000426280 PABPC5Q96DU9 382 aaKnown RBP14.13□□□□□ -0.15
GPC1-204ENST00000426280 VN1R3Q9BXE9 311 aa14.13□□□□□ -0.15
GPC1-204ENST00000426280 CLEC1BQ9P126 229 aa14.13□□□□□ -0.15
GPC1-204ENST00000426280 CLIC4Q9Y696 253 aa14.13□□□□□ -0.15
GPC1-204ENST00000426280 VPS37CA5D8V6 355 aaPredicted RBP14.12□□□□□ -0.15
GPC1-204ENST00000426280 SFI1A8K8P3 1242 aa14.12□□□□□ -0.15
GPC1-204ENST00000426280 F8W810 466 aa14.12□□□□□ -0.15
GPC1-204ENST00000426280 HOXA2O43364 376 aa14.12□□□□□ -0.15
GPC1-204ENST00000426280 GLP2RO95838 553 aa14.12□□□□□ -0.15
GPC1-204ENST00000426280 POMCP01189 267 aa14.12□□□□□ -0.15
GPC1-204ENST00000426280 HSP90AA1P07900 732 aaKnown RBP14.12□□□□□ -0.15
GPC1-204ENST00000426280 GALTP07902 379 aa14.12□□□□□ -0.15
GPC1-204ENST00000426280 NCLP19338 710 aaKnown RBP14.12□□□□□ -0.15
GPC1-204ENST00000426280 SYT1P21579 422 aa14.12□□□□□ -0.15
GPC1-204ENST00000426280 NRIP1P48552 1158 aa14.12□□□□□ -0.15
GPC1-204ENST00000426280 SLC11A1P49279 550 aa14.12□□□□□ -0.15
GPC1-204ENST00000426280 RESTQ13127 1097 aa14.12□□□□□ -0.15
GPC1-204ENST00000426280 TFDP1Q14186 410 aa14.12□□□□□ -0.15
GPC1-204ENST00000426280 EEF1DP3Q658K8 133 aa14.12□□□□□ -0.15
GPC1-204ENST00000426280 CDCA2Q69YH5 1023 aaPredicted RBP14.12□□□□□ -0.15
GPC1-204ENST00000426280 GSTCDQ8NEC7 633 aa14.12□□□□□ -0.15
GPC1-204ENST00000426280 FEZF2Q8TBJ5 459 aa14.12□□□□□ -0.15
GPC1-204ENST00000426280 MICAL1Q8TDZ2 1067 aa14.12□□□□□ -0.15
GPC1-204ENST00000426280 AUTS2Q8WXX7 1259 aa14.12□□□□□ -0.15
GPC1-204ENST00000426280 MRPS27Q92552 414 aaKnown RBP14.12□□□□□ -0.15
GPC1-204ENST00000426280 SYMPKQ92797 1274 aaKnown RBP14.12□□□□□ -0.15
GPC1-204ENST00000426280 CCDC43Q96MW1 224 aaKnown RBP14.12□□□□□ -0.15
GPC1-204ENST00000426280 ZNF558Q96NG5 402 aa14.12□□□□□ -0.15
GPC1-204ENST00000426280 UHRF1Q96T88 793 aaPredicted RBP14.12□□□□□ -0.15
GPC1-204ENST00000426280 NFKBIZQ9BYH8 718 aa14.12□□□□□ -0.15
GPC1-204ENST00000426280 CCDC113Q9H0I3 377 aa14.12□□□□□ -0.15
GPC1-204ENST00000426280 GBP3Q9H0R5 595 aa14.12□□□□□ -0.15
GPC1-204ENST00000426280 CSRNP2Q9H175 543 aa14.12□□□□□ -0.15
GPC1-204ENST00000426280 FZD8Q9H461 694 aa14.12□□□□□ -0.15
GPC1-204ENST00000426280 NXF3Q9H4D5 531 aaKnown RBP14.12□□□□□ -0.15
GPC1-204ENST00000426280 NPHP3-ACAD11A0A0J9YXS1 232 aa14.11□□□□□ -0.15
GPC1-204ENST00000426280 A0A1B0GUA9 196 aa14.11□□□□□ -0.15
GPC1-204ENST00000426280 GRXCR2A6NFK2 248 aa14.11□□□□□ -0.15
GPC1-204ENST00000426280 ERLIN2O94905 339 aa14.11□□□□□ -0.15
GPC1-204ENST00000426280 NPTXRO95502 500 aa14.11□□□□□ -0.15
GPC1-204ENST00000426280 EYA4O95677 639 aa14.11□□□□□ -0.15
GPC1-204ENST00000426280 LIG1P18858 919 aa14.11□□□□□ -0.15
GPC1-204ENST00000426280 MUTP22033 750 aa14.11□□□□□ -0.15
GPC1-204ENST00000426280 AKAP5P24588 427 aa14.11□□□□□ -0.15
GPC1-204ENST00000426280 RAB27AP51159 221 aa14.11□□□□□ -0.15
GPC1-204ENST00000426280 SF3A1Q15459 793 aaKnown RBP14.11□□□□□ -0.15
GPC1-204ENST00000426280 ZRSR1Q15695 479 aaKnown RBP14.11□□□□□ -0.15
GPC1-204ENST00000426280 NT5DC1Q5TFE4 455 aa14.11□□□□□ -0.15
GPC1-204ENST00000426280 PLPP4Q5VZY2 271 aa14.11□□□□□ -0.15
GPC1-204ENST00000426280 RINT1Q6NUQ1 792 aa14.11□□□□□ -0.15
GPC1-204ENST00000426280 C1orf186Q6ZWK4 172 aa14.11□□□□□ -0.15
GPC1-204ENST00000426280 USP49Q70CQ1 688 aa14.11□□□□□ -0.15
GPC1-204ENST00000426280 MCPH1Q8NEM0 835 aa14.11□□□□□ -0.15
GPC1-204ENST00000426280 ZFP42Q96MM3 310 aa14.11□□□□□ -0.15
GPC1-204ENST00000426280 GAD1Q99259 594 aa14.11□□□□□ -0.15
GPC1-204ENST00000426280 APOL6Q9BWW8 343 aa14.11□□□□□ -0.15
GPC1-204ENST00000426280 AAASQ9NRG9 546 aa14.11□□□□□ -0.15
GPC1-204ENST00000426280 RNF216Q9NWF9 866 aaPredicted RBP14.11□□□□□ -0.15
GPC1-204ENST00000426280 SPG21Q9NZD8 308 aa14.11□□□□□ -0.15
GPC1-204ENST00000426280 CACNG4Q9UBN1 327 aa14.11□□□□□ -0.15
GPC1-204ENST00000426280 TNFRSF10AO00220 468 aa14.1□□□□□ -0.15
GPC1-204ENST00000426280 LAD1O00515 517 aa14.1□□□□□ -0.15
GPC1-204ENST00000426280 ZC3H11AO75152 810 aaKnown RBP eCLIP14.1□□□□□ -0.15
GPC1-204ENST00000426280 ITGA4P13612 1032 aa14.1□□□□□ -0.15
GPC1-204ENST00000426280 IGFBP6P24592 240 aaPredicted RBP14.1□□□□□ -0.15
GPC1-204ENST00000426280 RAD51AP2Q09MP3 1159 aa14.1□□□□□ -0.15
GPC1-204ENST00000426280 PTPAQ15257 358 aa14.1□□□□□ -0.15
GPC1-204ENST00000426280 AAK1Q2M2I8 961 aa14.1□□□□□ -0.15
GPC1-204ENST00000426280 HYIQ5T013 277 aa14.1□□□□□ -0.15
GPC1-204ENST00000426280 KRT79Q5XKE5 535 aa14.1□□□□□ -0.15
GPC1-204ENST00000426280 HAUS3Q68CZ6 603 aa14.1□□□□□ -0.15
GPC1-204ENST00000426280 PTCRAQ6ISU1 281 aaPredicted RBP14.1□□□□□ -0.15
GPC1-204ENST00000426280 GLB1LQ6UWU2 654 aa14.1□□□□□ -0.15
GPC1-204ENST00000426280 PPP4R3CPQ6ZMV5 832 aa14.1□□□□□ -0.15
GPC1-204ENST00000426280 TAS1R3Q7RTX0 852 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms