RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 INTUQ9ULD6 942 aa6.55□□□□□ -1.36
LSM5-206ENST00000409987 DDX3XO00571 662 aaKnown RBP eCLIP6.54□□□□□ -1.362e-12■■■■□ 20.9
LSM5-206ENST00000409987 CREB3O43889 395 aa6.54□□□□□ -1.36
LSM5-206ENST00000409987 KRT18P05783 430 aaKnown RBP6.54□□□□□ -1.36
LSM5-206ENST00000409987 MYBP10242 640 aa6.54□□□□□ -1.36
LSM5-206ENST00000409987 GAAP10253 952 aa6.54□□□□□ -1.36
LSM5-206ENST00000409987 GSPT1P15170 499 aaKnown RBP6.54□□□□□ -1.36
LSM5-206ENST00000409987 ETV4P43268 484 aa6.54□□□□□ -1.36
LSM5-206ENST00000409987 TRIM68Q6AZZ1 485 aa6.54□□□□□ -1.36
LSM5-206ENST00000409987 LARP4Q71RC2 724 aaKnown RBP eCLIP6.54□□□□□ -1.364e-10■□□□□ 10.7
LSM5-206ENST00000409987 GRAMD1CQ8IYS0 662 aa6.54□□□□□ -1.36
LSM5-206ENST00000409987 PIK3C3Q8NEB9 887 aa6.54□□□□□ -1.36
LSM5-206ENST00000409987 UBE2Q2Q8WVN8 375 aa6.54□□□□□ -1.36
LSM5-206ENST00000409987 YTHDC1Q96MU7 727 aaKnown RBP6.54□□□□□ -1.36
LSM5-206ENST00000409987 RPS6KC1Q96S38 1066 aa6.54□□□□□ -1.36
LSM5-206ENST00000409987 MAP3K14Q99558 947 aa6.54□□□□□ -1.36
LSM5-206ENST00000409987 ACO2Q99798 780 aaKnown RBP6.54□□□□□ -1.36
LSM5-206ENST00000409987 SPATA25Q9BR10 227 aa6.54□□□□□ -1.36
LSM5-206ENST00000409987 C1orf112Q9NSG2 853 aa6.54□□□□□ -1.36
LSM5-206ENST00000409987 RBM12Q9NTZ6 932 aaKnown RBP6.54□□□□□ -1.36
LSM5-206ENST00000409987 A6NNZ2 444 aa6.53□□□□□ -1.36
LSM5-206ENST00000409987 CTNND1O60716 968 aaKnown RBP6.53□□□□□ -1.36
LSM5-206ENST00000409987 FSBPO95073 299 aa6.53□□□□□ -1.36
LSM5-206ENST00000409987 HMGCRP04035 888 aa6.53□□□□□ -1.36
LSM5-206ENST00000409987 MYL1P05976 194 aa6.53□□□□□ -1.36
LSM5-206ENST00000409987 LTA4HP09960 611 aaKnown RBP6.53□□□□□ -1.36
LSM5-206ENST00000409987 CTSSP25774 331 aa6.53□□□□□ -1.36
LSM5-206ENST00000409987 MGAT2Q10469 447 aa6.53□□□□□ -1.36
LSM5-206ENST00000409987 IL10RAQ13651 578 aa6.53□□□□□ -1.36
LSM5-206ENST00000409987 SEPT2Q15019 361 aa6.53□□□□□ -1.36
LSM5-206ENST00000409987 NOMO1Q15155 1222 aa6.53□□□□□ -1.36
LSM5-206ENST00000409987 MAN2A1Q16706 1144 aa6.53□□□□□ -1.36
LSM5-206ENST00000409987 CYB5RLQ6IPT4 315 aa6.53□□□□□ -1.36
LSM5-206ENST00000409987 ABHD15Q6UXT9 468 aa6.53□□□□□ -1.36
LSM5-206ENST00000409987 IFNL2Q8IZJ0 200 aa6.53□□□□□ -1.36
LSM5-206ENST00000409987 UNC5BQ8IZJ1 945 aa6.53□□□□□ -1.36
LSM5-206ENST00000409987 MARCH10Q8NA82 808 aaPredicted RBP6.53□□□□□ -1.36
LSM5-206ENST00000409987 ZBTB34Q8NCN2 500 aa6.53□□□□□ -1.36
LSM5-206ENST00000409987 GPR156Q8NFN8 814 aa6.53□□□□□ -1.36
LSM5-206ENST00000409987 HOXB13Q92826 284 aaPredicted RBP6.53□□□□□ -1.36
LSM5-206ENST00000409987 PAWRQ96IZ0 340 aaKnown RBP6.53□□□□□ -1.36
LSM5-206ENST00000409987 KATNBL1Q9H079 304 aa6.53□□□□□ -1.36
LSM5-206ENST00000409987 L2HGDHQ9H9P8 463 aa6.53□□□□□ -1.36
LSM5-206ENST00000409987 KCTD3Q9Y597 815 aa6.53□□□□□ -1.36
LSM5-206ENST00000409987 FRMPD2Q68DX3 1309 aaPredicted RBP6.52□□□□□ -1.37
LSM5-206ENST00000409987 DTNBO60941 627 aa6.52□□□□□ -1.37
LSM5-206ENST00000409987 MEF2AQ02078 507 aaPredicted RBP6.52□□□□□ -1.37
LSM5-206ENST00000409987 UBE3CQ15386 1083 aa6.52□□□□□ -1.37
LSM5-206ENST00000409987 PGS1Q32NB8 556 aa6.52□□□□□ -1.37
LSM5-206ENST00000409987 KLHDC10Q6PID8 442 aa6.52□□□□□ -1.37
LSM5-206ENST00000409987 KSR2Q6VAB6 950 aa6.52□□□□□ -1.37
LSM5-206ENST00000409987 ATG14Q6ZNE5 492 aa6.52□□□□□ -1.37
LSM5-206ENST00000409987 Q6ZUG5 572 aa6.52□□□□□ -1.37
LSM5-206ENST00000409987 MSL3Q8N5Y2 521 aaKnown RBP6.52□□□□□ -1.37
LSM5-206ENST00000409987 PPP1R35Q8TAP8 253 aa6.52□□□□□ -1.37
LSM5-206ENST00000409987 KAT5Q92993 513 aa6.52□□□□□ -1.37
LSM5-206ENST00000409987 HDAC10Q969S8 669 aa6.52□□□□□ -1.37
LSM5-206ENST00000409987 VWA7Q9Y334 891 aa6.52□□□□□ -1.37
LSM5-206ENST00000409987 A0A1B0GTL3 188 aa6.51□□□□□ -1.37
LSM5-206ENST00000409987 SH3D21A4FU49 640 aa6.51□□□□□ -1.37
LSM5-206ENST00000409987 AKR1B10O60218 316 aa6.51□□□□□ -1.37
LSM5-206ENST00000409987 PRAMEF4O60810 478 aa6.51□□□□□ -1.37
LSM5-206ENST00000409987 CAP1Q01518 475 aa6.51□□□□□ -1.37
LSM5-206ENST00000409987 ADAM15Q13444 863 aa6.51□□□□□ -1.37
LSM5-206ENST00000409987 UBE4AQ14139 1066 aa6.51□□□□□ -1.37
LSM5-206ENST00000409987 PCOLCEQ15113 449 aa6.51□□□□□ -1.37
LSM5-206ENST00000409987 MCTP1Q6DN14 999 aa6.51□□□□□ -1.37
LSM5-206ENST00000409987 TSHZ1Q6ZSZ6 1077 aa6.51□□□□□ -1.37
LSM5-206ENST00000409987 OVCH2Q7RTZ1 564 aa6.51□□□□□ -1.37
LSM5-206ENST00000409987 CLEC14AQ86T13 490 aa6.51□□□□□ -1.37
LSM5-206ENST00000409987 REXO1L1PQ8IX06 675 aa6.51□□□□□ -1.37
LSM5-206ENST00000409987 RTKN2Q8IZC4 609 aa6.51□□□□□ -1.37
LSM5-206ENST00000409987 ADGRG2Q8IZP9 1017 aa6.51□□□□□ -1.37
LSM5-206ENST00000409987 SNX33Q8WV41 574 aa6.51□□□□□ -1.37
LSM5-206ENST00000409987 C1GALT1C1Q96EU7 318 aa6.51□□□□□ -1.37
LSM5-206ENST00000409987 AJUBAQ96IF1 538 aa6.51□□□□□ -1.37
LSM5-206ENST00000409987 FAM84AQ96KN4 292 aa6.51□□□□□ -1.37
LSM5-206ENST00000409987 FAM193BQ96PV7 902 aaPredicted RBP6.51□□□□□ -1.37
LSM5-206ENST00000409987 KIAA1683Q9H0B3 1180 aa6.51□□□□□ -1.37
LSM5-206ENST00000409987 CD320Q9NPF0 282 aa6.51□□□□□ -1.37
LSM5-206ENST00000409987 CHST12Q9NRB3 414 aa6.51□□□□□ -1.37
LSM5-206ENST00000409987 NTMQ9P121 344 aa6.51□□□□□ -1.37
LSM5-206ENST00000409987 CNOT6Q9ULM6 557 aaKnown RBP6.51□□□□□ -1.37
LSM5-206ENST00000409987 SMG5Q9UPR3 1016 aaKnown RBP6.51□□□□□ -1.37
LSM5-206ENST00000409987 PTPN22Q9Y2R2 807 aa6.51□□□□□ -1.37
LSM5-206ENST00000409987 PCDHA13Q9Y5I0 950 aa6.51□□□□□ -1.37
LSM5-206ENST00000409987 RPTORQ8N122 1335 aa6.5□□□□□ -1.37
LSM5-206ENST00000409987 C2orf78A6NCI8 922 aa6.5□□□□□ -1.37
LSM5-206ENST00000409987 TCAF2A6NFQ2 919 aa6.5□□□□□ -1.37
LSM5-206ENST00000409987 FFAR3O14843 346 aa6.5□□□□□ -1.37
LSM5-206ENST00000409987 PLIN1O60240 522 aa6.5□□□□□ -1.37
LSM5-206ENST00000409987 C1QTNF9P0C862 333 aa6.5□□□□□ -1.37
LSM5-206ENST00000409987 ZNF888P0CJ79 500 aaPredicted RBP6.5□□□□□ -1.37
LSM5-206ENST00000409987 TRIM27P14373 513 aa6.5□□□□□ -1.37
LSM5-206ENST00000409987 ADSLP30566 484 aaPredicted RBP6.5□□□□□ -1.37
LSM5-206ENST00000409987 CSF2RBP32927 897 aa6.5□□□□□ -1.37
LSM5-206ENST00000409987 SLC6A9P48067 706 aa6.5□□□□□ -1.37
LSM5-206ENST00000409987 MRE11P49959 708 aa6.5□□□□□ -1.37
LSM5-206ENST00000409987 USP14P54578 494 aa6.5□□□□□ -1.37
LSM5-206ENST00000409987 DSC2Q02487 901 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms