RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 AP1M1Q9BXS5 423 aa14.06□□□□□ -0.16
PTPRN2-202ENST00000389416 IFT122Q9HBG6 1241 aa14.06□□□□□ -0.16
PTPRN2-202ENST00000389416 DAAM1Q9Y4D1 1078 aa14.06□□□□□ -0.16
PTPRN2-202ENST00000389416 PASKQ96RG2 1323 aa14.06□□□□□ -0.16
PTPRN2-202ENST00000389416 HEXIM1O94992 359 aaKnown RBP14.06□□□□□ -0.16
PTPRN2-202ENST00000389416 ANXA13P27216 316 aa14.06□□□□□ -0.16
PTPRN2-202ENST00000389416 FXR1P51114 621 aaKnown RBP eCLIP14.06□□□□□ -0.16
PTPRN2-202ENST00000389416 PSMC6P62333 389 aa14.06□□□□□ -0.16
PTPRN2-202ENST00000389416 PGM5Q15124 567 aa14.06□□□□□ -0.16
PTPRN2-202ENST00000389416 PDLIM2Q96JY6 352 aa14.06□□□□□ -0.16
PTPRN2-202ENST00000389416 ADGRG1Q9Y653 693 aa14.06□□□□□ -0.16
PTPRN2-202ENST00000389416 IGSF9BQ9UPX0 1349 aa14.06□□□□□ -0.16
PTPRN2-202ENST00000389416 GPC5P78333 572 aa14.06□□□□□ -0.16
PTPRN2-202ENST00000389416 SARNPP82979 210 aaKnown RBP14.06□□□□□ -0.16
PTPRN2-202ENST00000389416 C2orf54Q08AI8 447 aa14.06□□□□□ -0.16
PTPRN2-202ENST00000389416 MTMR3Q13615 1198 aa14.06□□□□□ -0.16
PTPRN2-202ENST00000389416 EPB41L5Q9HCM4 733 aa14.06□□□□□ -0.16
PTPRN2-202ENST00000389416 A1CFQ9NQ94 594 aaKnown RBP14.06□□□□□ -0.16
PTPRN2-202ENST00000389416 KBTBD4Q9NVX7 518 aa14.06□□□□□ -0.16
PTPRN2-202ENST00000389416 M0QYV0 167 aa14.05□□□□□ -0.16
PTPRN2-202ENST00000389416 SLC26A4O43511 780 aa14.05□□□□□ -0.16
PTPRN2-202ENST00000389416 SF3A3Q12874 501 aaKnown RBP eCLIP14.05□□□□□ -0.16
PTPRN2-202ENST00000389416 SEZ6Q53EL9 994 aa14.05□□□□□ -0.16
PTPRN2-202ENST00000389416 ILDR1Q86SU0 546 aaPredicted RBP14.05□□□□□ -0.16
PTPRN2-202ENST00000389416 AFG1LQ8WV93 481 aa14.05□□□□□ -0.16
PTPRN2-202ENST00000389416 SNX9Q9Y5X1 595 aa14.05□□□□□ -0.16
PTPRN2-202ENST00000389416 MAD1L1Q9Y6D9 718 aa14.05□□□□□ -0.16
PTPRN2-202ENST00000389416 SCINQ9Y6U3 715 aa14.05□□□□□ -0.16
PTPRN2-202ENST00000389416 UBE4BO95155 1302 aa14.05□□□□□ -0.16
PTPRN2-202ENST00000389416 KBTBD13C9JR72 458 aa14.05□□□□□ -0.16
PTPRN2-202ENST00000389416 ASAP2O43150 1006 aa14.05□□□□□ -0.16
PTPRN2-202ENST00000389416 SUPT20HL2P0C7V6 817 aa14.05□□□□□ -0.16
PTPRN2-202ENST00000389416 PPP2R5CQ13362 524 aa14.05□□□□□ -0.16
PTPRN2-202ENST00000389416 CEP85LQ5SZL2 805 aa14.05□□□□□ -0.16
PTPRN2-202ENST00000389416 ATF7IP2Q5U623 682 aa14.05□□□□□ -0.16
PTPRN2-202ENST00000389416 THEM5Q8N1Q8 247 aa14.05□□□□□ -0.16
PTPRN2-202ENST00000389416 GLT1D1Q96MS3 346 aa14.05□□□□□ -0.16
PTPRN2-202ENST00000389416 OGFRQ9NZT2 677 aa14.05□□□□□ -0.16
PTPRN2-202ENST00000389416 CAPN11Q9UMQ6 739 aa14.05□□□□□ -0.16
PTPRN2-202ENST00000389416 RABGGTAQ92696 567 aa14.05□□□□□ -0.16
PTPRN2-202ENST00000389416 SRGAP2O75044 1071 aa14.05□□□□□ -0.16
PTPRN2-202ENST00000389416 RPS6KA5O75582 802 aa14.05□□□□□ -0.16
PTPRN2-202ENST00000389416 CD44P16070 742 aaKnown RBP14.05□□□□□ -0.16
PTPRN2-202ENST00000389416 ADORA2BP29275 332 aa14.05□□□□□ -0.16
PTPRN2-202ENST00000389416 SOX5P35711 763 aa14.05□□□□□ -0.16
PTPRN2-202ENST00000389416 MXRA7P84157 204 aa14.05□□□□□ -0.16
PTPRN2-202ENST00000389416 LY6KQ17RY6 165 aa14.05□□□□□ -0.16
PTPRN2-202ENST00000389416 PDXDC1Q6P996 788 aa14.05□□□□□ -0.16
PTPRN2-202ENST00000389416 AFAP1L1Q8TED9 768 aa14.05□□□□□ -0.16
PTPRN2-202ENST00000389416 PDE11AQ9HCR9 933 aa14.05□□□□□ -0.16
PTPRN2-202ENST00000389416 SLC16A3O15427 465 aaKnown RBP14.04□□□□□ -0.16
PTPRN2-202ENST00000389416 STAMBPO95630 424 aa14.04□□□□□ -0.16
PTPRN2-202ENST00000389416 UCHL3P15374 230 aa14.04□□□□□ -0.16
PTPRN2-202ENST00000389416 PLTPP55058 493 aa14.04□□□□□ -0.16
PTPRN2-202ENST00000389416 NCOA4Q13772 614 aa14.04□□□□□ -0.16
PTPRN2-202ENST00000389416 TRIP13Q15645 432 aaPredicted RBP14.04□□□□□ -0.16
PTPRN2-202ENST00000389416 Q4G0T1 1027 aa14.04□□□□□ -0.16
PTPRN2-202ENST00000389416 GABPB2Q8TAK5 448 aaPredicted RBP14.04□□□□□ -0.16
PTPRN2-202ENST00000389416 ZMYND15Q9H091 742 aa14.04□□□□□ -0.16
PTPRN2-202ENST00000389416 AGO4Q9HCK5 861 aaKnown RBP14.04□□□□□ -0.16
PTPRN2-202ENST00000389416 HAUS2Q9NVX0 235 aa14.04□□□□□ -0.16
PTPRN2-202ENST00000389416 USP27XA6NNY8 438 aa14.04□□□□□ -0.16
PTPRN2-202ENST00000389416 URGCPQ8TCY9 931 aa14.04□□□□□ -0.16
PTPRN2-202ENST00000389416 SLITRK6Q9H5Y7 841 aa14.04□□□□□ -0.16
PTPRN2-202ENST00000389416 ATP8B3O60423 1300 aa14.04□□□□□ -0.16
PTPRN2-202ENST00000389416 FGGP02679 453 aa14.04□□□□□ -0.16
PTPRN2-202ENST00000389416 RWDD2BP57060 319 aa14.04□□□□□ -0.16
PTPRN2-202ENST00000389416 GEN1Q17RS7 908 aa14.04□□□□□ -0.16
PTPRN2-202ENST00000389416 KCTD17Q8N5Z5 321 aa14.04□□□□□ -0.16
PTPRN2-202ENST00000389416 PRPF31Q8WWY3 499 aaKnown RBP14.04□□□□□ -0.16
PTPRN2-202ENST00000389416 HSPH1Q92598 858 aa14.04□□□□□ -0.16
PTPRN2-202ENST00000389416 BUB1BO60566 1050 aaPredicted RBP14.03□□□□□ -0.16
PTPRN2-202ENST00000389416 TSPY1Q01534 308 aa14.03□□□□□ -0.16
PTPRN2-202ENST00000389416 LGSNQ5TDP6 509 aa14.03□□□□□ -0.16
PTPRN2-202ENST00000389416 HEMGNQ9BXL5 484 aa14.03□□□□□ -0.16
PTPRN2-202ENST00000389416 TRIM7Q9C029 511 aa14.03□□□□□ -0.16
PTPRN2-202ENST00000389416 AGPAT3Q9NRZ7 376 aa14.03□□□□□ -0.16
PTPRN2-202ENST00000389416 PRMT7Q9NVM4 692 aaPredicted RBP14.03□□□□□ -0.16
PTPRN2-202ENST00000389416 PCSK1NQ9UHG2 260 aa14.03□□□□□ -0.16
PTPRN2-202ENST00000389416 DLG5Q8TDM6 1919 aa14.03□□□□□ -0.16
PTPRN2-202ENST00000389416 HGSO14964 777 aaPredicted RBP14.03□□□□□ -0.16
PTPRN2-202ENST00000389416 MCF2LO15068 1137 aa14.03□□□□□ -0.16
PTPRN2-202ENST00000389416 KIAA0391O15091 583 aaKnown RBP14.03□□□□□ -0.16
PTPRN2-202ENST00000389416 RFX1P22670 979 aa14.03□□□□□ -0.16
PTPRN2-202ENST00000389416 CPT1AP50416 773 aa14.03□□□□□ -0.16
PTPRN2-202ENST00000389416 SOX10P56693 466 aa14.03□□□□□ -0.16
PTPRN2-202ENST00000389416 PSMC1P62191 440 aaKnown RBP14.03□□□□□ -0.16
PTPRN2-202ENST00000389416 GIT2Q14161 759 aa14.03□□□□□ -0.16
PTPRN2-202ENST00000389416 NR1I3Q14994 352 aa14.03□□□□□ -0.16
PTPRN2-202ENST00000389416 SAMD3Q8N6K7 520 aa14.03□□□□□ -0.16
PTPRN2-202ENST00000389416 CLMNQ96JQ2 1002 aa14.03□□□□□ -0.16
PTPRN2-202ENST00000389416 PBKQ96KB5 322 aa14.03□□□□□ -0.16
PTPRN2-202ENST00000389416 APEX2Q9UBZ4 518 aa14.03□□□□□ -0.16
PTPRN2-202ENST00000389416 LMO7Q8WWI1 1683 aa14.03□□□□□ -0.16
PTPRN2-202ENST00000389416 EIF3DO15371 548 aaKnown RBP eCLIP14.03□□□□□ -0.169e-7■■■□□ 16.3
PTPRN2-202ENST00000389416 RGS16O15492 202 aaPredicted RBP14.03□□□□□ -0.16
PTPRN2-202ENST00000389416 KLRC1P26715 233 aa14.03□□□□□ -0.16
PTPRN2-202ENST00000389416 MAN1A1P33908 653 aa14.03□□□□□ -0.16
PTPRN2-202ENST00000389416 CDC42EP1Q00587 391 aa14.03□□□□□ -0.16
PTPRN2-202ENST00000389416 FAM117BQ6P1L5 589 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms