RNA–Protein interactions for RNA: YOR138C

RUP1, Transcript of Protein that regulates ubiquitination of Rsp5p, yeastyeast

Gene RUP1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RUP1YOR138C YDL177CQ12257 170 aa6.86□□□□□ -1.31
RUP1YOR138C RPP1AP05318 106 aaPredicted RBP6.85□□□□□ -1.31
RUP1YOR138C ARG80P07249 177 aa6.85□□□□□ -1.31
RUP1YOR138C GCD1P09032 578 aaPredicted RBP6.85□□□□□ -1.31
RUP1YOR138C ATS1P31386 333 aa6.85□□□□□ -1.31
RUP1YOR138C MDL1P33310 695 aa6.85□□□□□ -1.31
RUP1YOR138C ECT1P33412 323 aa6.85□□□□□ -1.31
RUP1YOR138C AUR1P36107 401 aaPredicted RBP6.85□□□□□ -1.31
RUP1YOR138C SWM2P40342 146 aa6.85□□□□□ -1.31
RUP1YOR138C LEM3P42838 414 aa6.85□□□□□ -1.31
RUP1YOR138C LYS5P50113 272 aa6.85□□□□□ -1.31
RUP1YOR138C KAP120Q02932 1032 aa6.85□□□□□ -1.31
RUP1YOR138C YDR249CQ03787 373 aa6.85□□□□□ -1.31
RUP1YOR138C UTP15Q04305 513 aaKnown RBP6.85□□□□□ -1.31
RUP1YOR138C KEI1Q06346 221 aa6.85□□□□□ -1.31
RUP1YOR138C BMT6Q12291 365 aa6.85□□□□□ -1.31
RUP1YOR138C YHR213W-AQ8TGT4 77 aa6.85□□□□□ -1.31
RUP1YOR138C MRP1P10662 321 aaKnown RBP6.84□□□□□ -1.31
RUP1YOR138C HAP4P14064 554 aa6.84□□□□□ -1.31
RUP1YOR138C FUS3P16892 353 aaKnown RBP6.84□□□□□ -1.31
RUP1YOR138C HXT2P23585 541 aa6.84□□□□□ -1.31
RUP1YOR138C SUI1P32911 108 aaKnown RBP6.84□□□□□ -1.31
RUP1YOR138C VPS17P32913 551 aa6.84□□□□□ -1.31
RUP1YOR138C DOA1P36037 715 aa6.84□□□□□ -1.31
RUP1YOR138C ALG3P38179 458 aa6.84□□□□□ -1.31
RUP1YOR138C PHO90P39535 881 aa6.84□□□□□ -1.31
RUP1YOR138C SFH5P47008 294 aa6.84□□□□□ -1.31
RUP1YOR138C FMP48P53233 369 aa6.84□□□□□ -1.31
RUP1YOR138C CAF40P53829 373 aa6.84□□□□□ -1.31
RUP1YOR138C INN1P53901 409 aa6.84□□□□□ -1.31
RUP1YOR138C ASI3P53983 676 aa6.84□□□□□ -1.31
RUP1YOR138C INP1Q03694 420 aa6.84□□□□□ -1.31
RUP1YOR138C TY1A-DR2Q03964 440 aaKnown RBP6.84□□□□□ -1.31
RUP1YOR138C TY1A-MR1Q04215 440 aa6.84□□□□□ -1.31
RUP1YOR138C YML096WQ04489 525 aa6.84□□□□□ -1.31
RUP1YOR138C PUS9Q12069 462 aa6.84□□□□□ -1.31
RUP1YOR138C RTC5Q12108 567 aaKnown RBP6.84□□□□□ -1.31
RUP1YOR138C TY1A-BLQ12266 440 aa6.84□□□□□ -1.31
RUP1YOR138C PSF1Q12488 208 aa6.84□□□□□ -1.31
RUP1YOR138C MSB2P32334 1306 aa6.84□□□□□ -1.31
RUP1YOR138C QCR7P00128 127 aa6.84□□□□□ -1.31
RUP1YOR138C PRB1P09232 635 aa6.84□□□□□ -1.31
RUP1YOR138C MRP2P10663 115 aaPredicted RBP6.84□□□□□ -1.31
RUP1YOR138C MRPL16P38064 232 aa6.84□□□□□ -1.31
RUP1YOR138C MAL32P38158 584 aa6.84□□□□□ -1.31
RUP1YOR138C HXT5P38695 592 aa6.84□□□□□ -1.31
RUP1YOR138C HRB1P38922 454 aaKnown RBP RIP-Chip data6.84□□□□□ -1.31not detected
RUP1YOR138C CAF16P43569 289 aa6.84□□□□□ -1.31
RUP1YOR138C UBX6P47049 396 aa6.84□□□□□ -1.31
RUP1YOR138C VHT1P53241 593 aa6.84□□□□□ -1.31
RUP1YOR138C MAL12P53341 584 aa6.84□□□□□ -1.31
RUP1YOR138C ARG5,6Q01217 863 aa6.84□□□□□ -1.31
RUP1YOR138C TAZ1Q06510 381 aa6.84□□□□□ -1.31
RUP1YOR138C CYK3Q07533 885 aa6.84□□□□□ -1.31
RUP1YOR138C YDL211CQ12121 372 aa6.84□□□□□ -1.31
RUP1YOR138C YOL107WQ12239 342 aa6.84□□□□□ -1.31
RUP1YOR138C VPS13Q07878 3144 aa6.84□□□□□ -1.32
RUP1YOR138C SLY41P22215 453 aa6.83□□□□□ -1.32
RUP1YOR138C CNB1P25296 175 aa6.83□□□□□ -1.32
RUP1YOR138C ERG4P25340 473 aa6.83□□□□□ -1.32
RUP1YOR138C MGR1P25573 417 aa6.83□□□□□ -1.32
RUP1YOR138C PBN1P25580 416 aa6.83□□□□□ -1.32
RUP1YOR138C YCR061WP25639 631 aa6.83□□□□□ -1.32
RUP1YOR138C MRP17P28778 131 aa6.83□□□□□ -1.32
RUP1YOR138C PDC2P32896 925 aa6.83□□□□□ -1.32
RUP1YOR138C ECM15P35195 104 aa6.83□□□□□ -1.32
RUP1YOR138C SFK1P35735 353 aa6.83□□□□□ -1.32
RUP1YOR138C EHT1P38295 451 aa6.83□□□□□ -1.32
RUP1YOR138C AIM46P38885 310 aa6.83□□□□□ -1.32
RUP1YOR138C NAB3P38996 802 aaKnown RBP RIP-Chip data6.83□□□□□ -1.32not detected
RUP1YOR138C SSO2P39926 295 aa6.83□□□□□ -1.32
RUP1YOR138C OSW5P40219 148 aa6.83□□□□□ -1.32
RUP1YOR138C MOB1P40484 314 aa6.83□□□□□ -1.32
RUP1YOR138C PMT6P42934 759 aa6.83□□□□□ -1.32
RUP1YOR138C YGR042WP53227 271 aa6.83□□□□□ -1.32
RUP1YOR138C GTF1P53260 183 aaPredicted RBP6.83□□□□□ -1.32
RUP1YOR138C MTQ2Q03920 221 aaPredicted RBP6.83□□□□□ -1.32
RUP1YOR138C YHM2Q04013 314 aa6.83□□□□□ -1.32
RUP1YOR138C ISR1Q06098 443 aaKnown RBP6.83□□□□□ -1.32
RUP1YOR138C YOR365CQ08844 703 aa6.83□□□□□ -1.32
RUP1YOR138C LYS21Q12122 440 aaKnown RBP6.83□□□□□ -1.32
RUP1YOR138C CNE1P27825 502 aa6.83□□□□□ -1.32
RUP1YOR138C MRP20P32387 263 aa6.83□□□□□ -1.32
RUP1YOR138C CDC13P32797 924 aaKnown RBP6.83□□□□□ -1.32
RUP1YOR138C MRT4P33201 236 aaKnown RBP6.83□□□□□ -1.32
RUP1YOR138C CBT1P36038 271 aaPredicted RBP6.83□□□□□ -1.32
RUP1YOR138C YBR238CP38330 731 aaKnown RBP6.83□□□□□ -1.32
RUP1YOR138C ICE2P40499 491 aa6.83□□□□□ -1.32
RUP1YOR138C LOH1P47055 219 aa6.83□□□□□ -1.32
RUP1YOR138C TAD2P47058 250 aa6.83□□□□□ -1.32
RUP1YOR138C REC102Q02721 264 aa6.83□□□□□ -1.32
RUP1YOR138C SNO4Q04902 237 aa6.83□□□□□ -1.32
RUP1YOR138C GAS2Q06135 555 aa6.83□□□□□ -1.32
RUP1YOR138C HSP33Q08914 237 aaKnown RBP6.83□□□□□ -1.32
RUP1YOR138C MMT2Q08970 484 aa6.83□□□□□ -1.32
RUP1YOR138C HSP32Q08992 237 aa6.83□□□□□ -1.32
RUP1YOR138C YLR108CQ12259 485 aa6.83□□□□□ -1.32
RUP1YOR138C EAF3Q12432 401 aa6.83□□□□□ -1.32
RUP1YOR138C INH1P01097 85 aa6.82□□□□□ -1.32
RUP1YOR138C FUN19P28003 413 aaPredicted RBP6.82□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 26.7 ms