RNA–Protein interactions for RNA: YNL054W-A

YNL054W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YNL054W-A, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YNL054W-AYNL054W-A ATC1Q04005 294 aa3.73□□□□□ -1.81
YNL054W-AYNL054W-A RSA1Q08932 381 aa3.73□□□□□ -1.81
YNL054W-AYNL054W-A TDH3P00359 332 aaKnown RBP RIP-Chip data3.72□□□□□ -1.81not detected
YNL054W-AYNL054W-A COX2P00410 251 aa3.72□□□□□ -1.81
YNL054W-AYNL054W-A RPL24AP04449 155 aaKnown RBP3.72□□□□□ -1.81
YNL054W-AYNL054W-A CMK2P22517 447 aa3.72□□□□□ -1.81
YNL054W-AYNL054W-A ICL1P28240 557 aaPredicted RBP3.72□□□□□ -1.81
YNL054W-AYNL054W-A URA10P30402 227 aa3.72□□□□□ -1.81
YNL054W-AYNL054W-A COT1P32798 439 aa3.72□□□□□ -1.81
YNL054W-AYNL054W-A RPC37P36121 282 aa3.72□□□□□ -1.81
YNL054W-AYNL054W-A YPC1P38298 316 aa3.72□□□□□ -1.81
YNL054W-AYNL054W-A PET8P38921 284 aa3.72□□□□□ -1.81
YNL054W-AYNL054W-A PGU1P47180 361 aa3.72□□□□□ -1.81
YNL054W-AYNL054W-A DTD1Q07648 150 aaKnown RBP3.72□□□□□ -1.81
YNL054W-AYNL054W-A UTP23Q12339 254 aaKnown RBP3.72□□□□□ -1.81
YNL054W-AYNL054W-A IZH4Q99393 312 aa3.72□□□□□ -1.81
YNL054W-AYNL054W-A COY1P34237 679 aa3.71□□□□□ -1.81
YNL054W-AYNL054W-A KTI12P34253 313 aaKnown RBP3.71□□□□□ -1.81
YNL054W-AYNL054W-A PRM9P39551 298 aa3.71□□□□□ -1.81
YNL054W-AYNL054W-A KAP114P53067 1004 aa3.71□□□□□ -1.81
YNL054W-AYNL054W-A GMC2Q06201 188 aa3.71□□□□□ -1.81
YNL054W-AYNL054W-A YLR446WQ06204 433 aa3.71□□□□□ -1.81
YNL054W-AYNL054W-A RSR1P13856 272 aa3.7□□□□□ -1.82
YNL054W-AYNL054W-A POL30P15873 258 aaKnown RBP3.7□□□□□ -1.82
YNL054W-AYNL054W-A YEL045CP32616 141 aa3.7□□□□□ -1.82
YNL054W-AYNL054W-A CBF5P33322 483 aaKnown RBP RIP-Chip data3.7□□□□□ -1.82not detected
YNL054W-AYNL054W-A NUP84P52891 726 aa3.7□□□□□ -1.82
YNL054W-AYNL054W-A SHE10P53075 577 aa3.7□□□□□ -1.82
YNL054W-AYNL054W-A SWC4P53201 476 aa3.7□□□□□ -1.82
YNL054W-AYNL054W-A COX20Q04935 205 aa3.7□□□□□ -1.82
YNL054W-AYNL054W-A GPN3Q06543 272 aa3.7□□□□□ -1.82
YNL054W-AYNL054W-A ASR1Q06834 288 aa3.7□□□□□ -1.82
YNL054W-AYNL054W-A MIM1Q08176 113 aa3.7□□□□□ -1.82
YNL054W-AYNL054W-A ERP3Q12403 225 aa3.7□□□□□ -1.82
YNL054W-AYNL054W-A MSF1P08425 469 aa3.7□□□□□ -1.82
YNL054W-AYNL054W-A YSR3P23501 404 aa3.7□□□□□ -1.82
YNL054W-AYNL054W-A YKL063CP35725 167 aa3.7□□□□□ -1.82
YNL054W-AYNL054W-A SOL2P37262 315 aa3.7□□□□□ -1.82
YNL054W-AYNL054W-A SHE3P38272 425 aaKnown RBP3.7□□□□□ -1.82
YNL054W-AYNL054W-A IGD1P43598 195 aa3.7□□□□□ -1.82
YNL054W-AYNL054W-A MRX5P47007 382 aa3.7□□□□□ -1.82
YNL054W-AYNL054W-A ADD37Q03233 198 aa3.7□□□□□ -1.82
YNL054W-AYNL054W-A LIP2Q06005 328 aa3.7□□□□□ -1.82
YNL054W-AYNL054W-A ERD1P16151 362 aa3.69□□□□□ -1.82
YNL054W-AYNL054W-A RPL16BP26785 198 aaKnown RBP3.69□□□□□ -1.82
YNL054W-AYNL054W-A IMP3P32899 183 aaPredicted RBP3.69□□□□□ -1.82
YNL054W-AYNL054W-A YKL071WP36086 256 aa3.69□□□□□ -1.82
YNL054W-AYNL054W-A BMT2P38278 337 aa3.69□□□□□ -1.82
YNL054W-AYNL054W-A YJL118WP47022 219 aa3.69□□□□□ -1.82
YNL054W-AYNL054W-A RNH201P53942 307 aa3.69□□□□□ -1.82
YNL054W-AYNL054W-A CDC14Q00684 551 aa3.69□□□□□ -1.82
YNL054W-AYNL054W-A RMI1Q02685 241 aa3.69□□□□□ -1.82
YNL054W-AYNL054W-A GRX3Q03835 250 aa3.69□□□□□ -1.82
YNL054W-AYNL054W-A VBA1Q04301 562 aa3.69□□□□□ -1.82
YNL054W-AYNL054W-A RNH1Q04740 348 aa3.69□□□□□ -1.82
YNL054W-AYNL054W-A YLR173WQ06247 608 aa3.69□□□□□ -1.82
YNL054W-AYNL054W-A TAZ1Q06510 381 aa3.69□□□□□ -1.82
YNL054W-AYNL054W-A MHR1Q06630 226 aa3.69□□□□□ -1.82
YNL054W-AYNL054W-A RPL21BQ12672 160 aaKnown RBP3.69□□□□□ -1.82
YNL054W-AYNL054W-A MHP1P43638 1398 aa3.69□□□□□ -1.82
YNL054W-AYNL054W-A SKG6P32900 734 aaPredicted RBP3.68□□□□□ -1.82
YNL054W-AYNL054W-A YBR241CP38142 488 aa3.68□□□□□ -1.82
YNL054W-AYNL054W-A YBR062CP38239 180 aa3.68□□□□□ -1.82
YNL054W-AYNL054W-A SPT8P38915 602 aa3.68□□□□□ -1.82
YNL054W-AYNL054W-A PRE5P40302 234 aaKnown RBP3.68□□□□□ -1.82
YNL054W-AYNL054W-A STB1P42845 420 aa3.68□□□□□ -1.82
YNL054W-AYNL054W-A AGX1P43567 385 aa3.68□□□□□ -1.82
YNL054W-AYNL054W-A YPT32P51996 222 aaKnown RBP3.68□□□□□ -1.82
YNL054W-AYNL054W-A SDS23P53172 527 aa3.68□□□□□ -1.82
YNL054W-AYNL054W-A YLR152CP54072 576 aa3.68□□□□□ -1.82
YNL054W-AYNL054W-A TPS1Q00764 495 aaKnown RBP3.68□□□□□ -1.82
YNL054W-AYNL054W-A YDR115WQ04598 105 aa3.68□□□□□ -1.82
YNL054W-AYNL054W-A CTS2Q06350 511 aa3.68□□□□□ -1.82
YNL054W-AYNL054W-A YDR018CQ12185 396 aa3.68□□□□□ -1.82
YNL054W-AYNL054W-A YOL107WQ12239 342 aa3.68□□□□□ -1.82
YNL054W-AYNL054W-A BI3Q9ZZW7 517 aa3.68□□□□□ -1.82
YNL054W-AYNL054W-A SSK22P25390 1331 aaPredicted RBP3.67□□□□□ -1.82
YNL054W-AYNL054W-A IME2P32581 645 aa3.67□□□□□ -1.82
YNL054W-AYNL054W-A YKL187CP34231 750 aa3.67□□□□□ -1.82
YNL054W-AYNL054W-A TAE1P38340 232 aa3.67□□□□□ -1.82
YNL054W-AYNL054W-A WSC4P38739 605 aa3.67□□□□□ -1.82
YNL054W-AYNL054W-A COA1P40452 197 aa3.67□□□□□ -1.82
YNL054W-AYNL054W-A SDT1P53078 280 aa3.67□□□□□ -1.82
YNL054W-AYNL054W-A YGL039WP53183 348 aaKnown RBP3.67□□□□□ -1.82
YNL054W-AYNL054W-A YNR066CP53752 436 aa3.67□□□□□ -1.82
YNL054W-AYNL054W-A YNL134CP53912 376 aaKnown RBP3.67□□□□□ -1.82
YNL054W-AYNL054W-A TSA2Q04120 196 aa3.67□□□□□ -1.82
YNL054W-AYNL054W-A TY3A-GQ12173 290 aa3.67□□□□□ -1.82
YNL054W-AYNL054W-A YBL111CQ3E7Y5 667 aa3.67□□□□□ -1.82
YNL054W-AYNL054W-A TY3A-IQ99219 290 aa3.67□□□□□ -1.82
YNL054W-AYNL054W-A COX4P04037 155 aa3.66□□□□□ -1.82
YNL054W-AYNL054W-A TFS1P14306 219 aa3.66□□□□□ -1.82
YNL054W-AYNL054W-A INO2P26798 304 aa3.66□□□□□ -1.82
YNL054W-AYNL054W-A CYM1P32898 989 aa3.66□□□□□ -1.82
YNL054W-AYNL054W-A MRPL6P32904 214 aa3.66□□□□□ -1.82
YNL054W-AYNL054W-A TIP20P33891 701 aa3.66□□□□□ -1.82
YNL054W-AYNL054W-A GPX1P36014 167 aa3.66□□□□□ -1.82
YNL054W-AYNL054W-A MRPL27P36526 146 aaPredicted RBP3.66□□□□□ -1.82
YNL054W-AYNL054W-A NPT1P39683 429 aaKnown RBP3.66□□□□□ -1.82
YNL054W-AYNL054W-A VAB2P40003 282 aa3.66□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 22.4 ms