RNA–Protein interactions for RNA: YMR247C

RKR1, Transcript of RING domain E3 ubiquitin ligase, yeastyeast

Gene RKR1, Length 4,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RKR1YMR247C PCL1P24867 279 aa0.76□□□□□ -2.29
RKR1YMR247C ELO2P25358 347 aa0.76□□□□□ -2.29
RKR1YMR247C CIN8P27895 1000 aa0.76□□□□□ -2.29
RKR1YMR247C MEI5P32489 222 aa0.76□□□□□ -2.29
RKR1YMR247C CLB6P32943 380 aa0.76□□□□□ -2.29
RKR1YMR247C CBF5P33322 483 aaKnown RBP RIP-Chip data0.76□□□□□ -2.29not detected
RKR1YMR247C MMS21P38632 267 aa0.76□□□□□ -2.29
RKR1YMR247C PEX18P38855 283 aa0.76□□□□□ -2.29
RKR1YMR247C ASP1P38986 381 aaPredicted RBP0.76□□□□□ -2.29
RKR1YMR247C GPD2P41911 440 aaKnown RBP0.76□□□□□ -2.29
RKR1YMR247C AIM23P47015 356 aa0.76□□□□□ -2.29
RKR1YMR247C HAM1P47119 197 aaKnown RBP0.76□□□□□ -2.29
RKR1YMR247C RMR1P53060 241 aa0.76□□□□□ -2.29
RKR1YMR247C YNR068CP53754 272 aa0.76□□□□□ -2.29
RKR1YMR247C CTF19Q02732 369 aa0.76□□□□□ -2.29
RKR1YMR247C TVP15Q03860 143 aa0.76□□□□□ -2.29
RKR1YMR247C YMR087WQ04299 284 aa0.76□□□□□ -2.29
RKR1YMR247C PIN3Q06449 215 aa0.76□□□□□ -2.29
RKR1YMR247C PEX27Q08580 376 aa0.76□□□□□ -2.29
RKR1YMR247C ADH3P07246 375 aaKnown RBP0.75□□□□□ -2.29
RKR1YMR247C SCH9P11792 824 aaKnown RBP0.75□□□□□ -2.29
RKR1YMR247C PEX3P28795 441 aa0.75□□□□□ -2.29
RKR1YMR247C VMA8P32610 256 aaKnown RBP0.75□□□□□ -2.29
RKR1YMR247C TRM7P38238 310 aaKnown RBP0.75□□□□□ -2.29
RKR1YMR247C YHK8P38776 514 aa0.75□□□□□ -2.29
RKR1YMR247C SLM1P40485 686 aa0.75□□□□□ -2.29
RKR1YMR247C TCB2P48231 1178 aa0.75□□□□□ -2.29
RKR1YMR247C SEH1P53011 349 aaKnown RBP0.75□□□□□ -2.29
RKR1YMR247C SLX9P53251 210 aaPredicted RBP0.75□□□□□ -2.29
RKR1YMR247C ZRG17P53735 605 aa0.75□□□□□ -2.29
RKR1YMR247C RPL21AQ02753 160 aaKnown RBP0.75□□□□□ -2.29
RKR1YMR247C INP2Q03824 705 aa0.75□□□□□ -2.29
RKR1YMR247C VAC14Q06708 880 aa0.75□□□□□ -2.29
RKR1YMR247C YPR063CQ12160 140 aa0.75□□□□□ -2.29
RKR1YMR247C RPL21BQ12672 160 aaKnown RBP0.75□□□□□ -2.29
RKR1YMR247C ISD11Q6Q560 94 aa0.75□□□□□ -2.29
RKR1YMR247C YSP2Q06681 1438 aa0.75□□□□□ -2.29
RKR1YMR247C SMC4Q12267 1418 aa0.75□□□□□ -2.29
RKR1YMR247C MES1P00958 751 aaKnown RBP0.75□□□□□ -2.29
RKR1YMR247C YOL163WP0CF20 169 aa0.75□□□□□ -2.29
RKR1YMR247C VPS3P23643 1011 aa0.75□□□□□ -2.29
RKR1YMR247C EXG1P23776 448 aaKnown RBP0.75□□□□□ -2.29
RKR1YMR247C VPH1P32563 840 aaKnown RBP0.75□□□□□ -2.29
RKR1YMR247C FMT1P32785 401 aa0.75□□□□□ -2.29
RKR1YMR247C YHR045WP38775 560 aa0.75□□□□□ -2.29
RKR1YMR247C FHL1P39521 936 aa0.75□□□□□ -2.29
RKR1YMR247C NDE1P40215 560 aa0.75□□□□□ -2.29
RKR1YMR247C YHC3P47040 408 aa0.75□□□□□ -2.29
RKR1YMR247C BUD32P53323 261 aa0.75□□□□□ -2.29
RKR1YMR247C STP3Q05937 343 aa0.75□□□□□ -2.29
RKR1YMR247C BER1Q06688 274 aaKnown RBP0.75□□□□□ -2.29
RKR1YMR247C RRP42Q12277 265 aaPredicted RBP0.75□□□□□ -2.29
RKR1YMR247C RNH203Q12338 110 aa0.75□□□□□ -2.29
RKR1YMR247C SRB8P25648 1427 aa0.75□□□□□ -2.29
RKR1YMR247C CDC37P06101 506 aaKnown RBP0.75□□□□□ -2.29
RKR1YMR247C FUS3P16892 353 aaKnown RBP0.75□□□□□ -2.29
RKR1YMR247C RPL16BP26785 198 aaKnown RBP0.75□□□□□ -2.29
RKR1YMR247C DPH5P32469 300 aaPredicted RBP0.75□□□□□ -2.29
RKR1YMR247C MRPL6P32904 214 aa0.75□□□□□ -2.29
RKR1YMR247C HEL1P36113 551 aa0.75□□□□□ -2.29
RKR1YMR247C MRPL27P36526 146 aaPredicted RBP0.75□□□□□ -2.29
RKR1YMR247C FRM2P37261 193 aa0.75□□□□□ -2.29
RKR1YMR247C ECM14P38836 430 aa0.75□□□□□ -2.29
RKR1YMR247C NPT1P39683 429 aaKnown RBP0.75□□□□□ -2.29
RKR1YMR247C SNL1P40548 159 aa0.75□□□□□ -2.29
RKR1YMR247C COS4P43542 379 aa0.75□□□□□ -2.29
RKR1YMR247C YGL262WP53054 175 aa0.75□□□□□ -2.29
RKR1YMR247C VAC7P53950 1165 aa0.75□□□□□ -2.29
RKR1YMR247C NUP116Q02630 1113 aa0.75□□□□□ -2.29
RKR1YMR247C PRM15Q03262 622 aa0.75□□□□□ -2.29
RKR1YMR247C TAF9Q05027 157 aa0.75□□□□□ -2.29
RKR1YMR247C MRX8Q05473 314 aa0.75□□□□□ -2.29
RKR1YMR247C SEC10Q06245 871 aa0.75□□□□□ -2.29
RKR1YMR247C SIA1Q12212 622 aa0.75□□□□□ -2.29
RKR1YMR247C PSO2P30620 661 aa0.74□□□□□ -2.29
RKR1YMR247C ALK2P32789 676 aaPredicted RBP0.74□□□□□ -2.29
RKR1YMR247C CDC13P32797 924 aaKnown RBP0.74□□□□□ -2.29
RKR1YMR247C PDC2P32896 925 aa0.74□□□□□ -2.29
RKR1YMR247C QDR3P38227 689 aa0.74□□□□□ -2.29
RKR1YMR247C SSO2P39926 295 aa0.74□□□□□ -2.29
RKR1YMR247C NCA3P46955 337 aa0.74□□□□□ -2.29
RKR1YMR247C YJR079WP47126 109 aa0.74□□□□□ -2.29
RKR1YMR247C YGL114WP53134 725 aa0.74□□□□□ -2.29
RKR1YMR247C VOA1P53262 265 aa0.74□□□□□ -2.29
RKR1YMR247C HST1P53685 503 aa0.74□□□□□ -2.29
RKR1YMR247C YNL146WP53906 100 aa0.74□□□□□ -2.29
RKR1YMR247C GRX5Q02784 150 aa0.74□□□□□ -2.29
RKR1YMR247C KRE28Q04431 385 aa0.74□□□□□ -2.29
RKR1YMR247C YOR289WQ12012 251 aaPredicted RBP0.74□□□□□ -2.29
RKR1YMR247C YPR1Q12458 312 aa0.74□□□□□ -2.29
RKR1YMR247C RPL24AP04449 155 aaKnown RBP0.74□□□□□ -2.29
RKR1YMR247C CHS1P08004 1131 aa0.74□□□□□ -2.29
RKR1YMR247C DAL5P15365 543 aa0.74□□□□□ -2.29
RKR1YMR247C AGA1P32323 725 aa0.74□□□□□ -2.29
RKR1YMR247C AEP1P32493 518 aa0.74□□□□□ -2.29
RKR1YMR247C VPS21P36017 210 aaKnown RBP0.74□□□□□ -2.29
RKR1YMR247C LAS1P36146 502 aaPredicted RBP0.74□□□□□ -2.29
RKR1YMR247C YHL026CP38740 315 aa0.74□□□□□ -2.29
RKR1YMR247C FET3P38993 636 aa0.74□□□□□ -2.29
RKR1YMR247C MIG3P39943 394 aa0.74□□□□□ -2.29
Retrieved 100 of 5,963 RNA–protein pairs in 66.2 ms