RNA–Protein interactions for RNA: YLR360W

VPS38, Transcript of Part of a Vps34p phosphatidylinositol 3-kinase complex, yeastyeast

Gene VPS38, Length 1,320 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS38YLR360W RVB1Q03940 463 aaKnown RBP2.3□□□□□ -2.04
VPS38YLR360W RDL2Q08742 149 aaKnown RBP2.3□□□□□ -2.04
VPS38YLR360W YDR262WQ12331 272 aa2.3□□□□□ -2.04
VPS38YLR360W PRP46Q12417 451 aaPredicted RBP2.3□□□□□ -2.04
VPS38YLR360W SPT7P35177 1332 aa2.3□□□□□ -2.04
VPS38YLR360W CTM1P38818 585 aa2.29□□□□□ -2.04
VPS38YLR360W SLM1P40485 686 aa2.29□□□□□ -2.04
VPS38YLR360W YGR168CP53293 376 aa2.29□□□□□ -2.04
VPS38YLR360W DTD1Q07648 150 aaKnown RBP2.29□□□□□ -2.04
VPS38YLR360W TFC7Q12415 435 aa2.29□□□□□ -2.04
VPS38YLR360W PRM4Q12498 284 aa2.29□□□□□ -2.04
VPS38YLR360W ERD1P16151 362 aa2.28□□□□□ -2.04
VPS38YLR360W ACB1P31787 87 aa2.28□□□□□ -2.04
VPS38YLR360W PET8P38921 284 aa2.28□□□□□ -2.04
VPS38YLR360W YJL144WP47009 104 aa2.28□□□□□ -2.04
VPS38YLR360W YGR016WP53209 190 aa2.28□□□□□ -2.04
VPS38YLR360W DIB1Q06819 143 aaPredicted RBP2.28□□□□□ -2.04
VPS38YLR360W HRT1Q08273 121 aa2.28□□□□□ -2.04
VPS38YLR360W RPL18AP0CX49 186 aaKnown RBP2.27□□□□□ -2.05
VPS38YLR360W RPL18BP0CX50 186 aaKnown RBP2.27□□□□□ -2.05
VPS38YLR360W HPR1P17629 752 aaKnown RBP2.27□□□□□ -2.05
VPS38YLR360W YPL245WQ12179 454 aaKnown RBP2.27□□□□□ -2.05
VPS38YLR360W RNR2P09938 399 aaKnown RBP2.26□□□□□ -2.05
VPS38YLR360W GAL3P13045 520 aa2.26□□□□□ -2.05
VPS38YLR360W DAL5P15365 543 aa2.26□□□□□ -2.05
VPS38YLR360W BUD2P33314 1104 aa2.26□□□□□ -2.05
VPS38YLR360W ECM14P38836 430 aa2.26□□□□□ -2.05
VPS38YLR360W LIN1P38852 340 aaPredicted RBP2.26□□□□□ -2.05
VPS38YLR360W ASP1P38986 381 aaPredicted RBP2.26□□□□□ -2.05
VPS38YLR360W YNR066CP53752 436 aa2.26□□□□□ -2.05
VPS38YLR360W YLR012CQ07927 99 aa2.26□□□□□ -2.05
VPS38YLR360W YPL264CQ08980 353 aa2.26□□□□□ -2.05
VPS38YLR360W TRM10Q12400 293 aa2.26□□□□□ -2.05
VPS38YLR360W CBP2P03874 630 aaPredicted RBP2.25□□□□□ -2.05
VPS38YLR360W INO2P26798 304 aa2.25□□□□□ -2.05
VPS38YLR360W SUR1P33300 382 aa2.25□□□□□ -2.05
VPS38YLR360W UIP5P36137 443 aa2.25□□□□□ -2.05
VPS38YLR360W NAS2P40555 220 aa2.25□□□□□ -2.05
VPS38YLR360W FYV8P46949 817 aaKnown RBP2.25□□□□□ -2.05
VPS38YLR360W IRC4Q03036 179 aa2.25□□□□□ -2.05
VPS38YLR360W GTO3Q04806 366 aa2.25□□□□□ -2.05
VPS38YLR360W YPR063CQ12160 140 aa2.25□□□□□ -2.05
VPS38YLR360W PPQ1P32945 549 aa2.24□□□□□ -2.05
VPS38YLR360W TKL2P33315 681 aa2.24□□□□□ -2.05
VPS38YLR360W CSI1Q04368 295 aa2.24□□□□□ -2.05
VPS38YLR360W YDR222WQ04925 415 aa2.24□□□□□ -2.05
VPS38YLR360W IES3Q12345 250 aa2.24□□□□□ -2.05
VPS38YLR360W ERP3Q12403 225 aa2.24□□□□□ -2.05
VPS38YLR360W ARO4P32449 370 aaKnown RBP2.23□□□□□ -2.05
VPS38YLR360W ZRT1P32804 376 aa2.23□□□□□ -2.05
VPS38YLR360W EDC2P40023 145 aaPredicted RBP2.23□□□□□ -2.05
VPS38YLR360W ECO1P43605 281 aa2.23□□□□□ -2.05
VPS38YLR360W SHE4P51534 789 aa2.23□□□□□ -2.05
VPS38YLR360W YPL080CQ02826 108 aa2.23□□□□□ -2.05
VPS38YLR360W UBX2Q04228 584 aa2.23□□□□□ -2.05
VPS38YLR360W YDR286CQ05530 114 aa2.23□□□□□ -2.05
VPS38YLR360W DXO1Q06349 442 aa2.23□□□□□ -2.05
VPS38YLR360W VIK1Q12045 647 aa2.23□□□□□ -2.05
VPS38YLR360W YPS1P32329 569 aa2.22□□□□□ -2.05
VPS38YLR360W SOP4P39543 234 aaPredicted RBP2.22□□□□□ -2.05
VPS38YLR360W UTP25P40498 721 aaKnown RBP2.22□□□□□ -2.05
VPS38YLR360W BUD13P46947 266 aaPredicted RBP2.22□□□□□ -2.05
VPS38YLR360W SNX41Q04053 625 aa2.22□□□□□ -2.05
VPS38YLR360W YOR292CQ08743 309 aa2.22□□□□□ -2.05
VPS38YLR360W SAM4Q08985 325 aaKnown RBP2.22□□□□□ -2.05
VPS38YLR360W UTP23Q12339 254 aaKnown RBP2.22□□□□□ -2.05
VPS38YLR360W DAL81P21657 970 aa2.21□□□□□ -2.06
VPS38YLR360W ALK2P32789 676 aaPredicted RBP2.21□□□□□ -2.06
VPS38YLR360W CSE1P33307 960 aa2.21□□□□□ -2.06
VPS38YLR360W SMC2P38989 1170 aaKnown RBP2.21□□□□□ -2.06
VPS38YLR360W YFR045WP43617 309 aa2.21□□□□□ -2.06
VPS38YLR360W YGL088WP53151 121 aa2.21□□□□□ -2.06
VPS38YLR360W ACT1P60010 375 aaKnown RBP2.21□□□□□ -2.06
VPS38YLR360W STE23Q06010 1027 aa2.21□□□□□ -2.06
VPS38YLR360W SGT2Q12118 346 aaKnown RBP2.21□□□□□ -2.06
VPS38YLR360W YKL162CP36052 402 aa2.2□□□□□ -2.06
VPS38YLR360W SDH4P37298 181 aa2.2□□□□□ -2.06
VPS38YLR360W YHR035WP38769 630 aa2.2□□□□□ -2.06
VPS38YLR360W CAJ1P39101 391 aa2.2□□□□□ -2.06
VPS38YLR360W AIM20P40451 204 aa2.2□□□□□ -2.06
VPS38YLR360W YFL040WP43562 540 aa2.2□□□□□ -2.06
VPS38YLR360W YDR114CQ04597 100 aa2.2□□□□□ -2.06
VPS38YLR360W ARC18Q05933 178 aaKnown RBP2.2□□□□□ -2.06
VPS38YLR360W PGC1Q08959 321 aa2.2□□□□□ -2.06
VPS38YLR360W YPL278CQ08990 100 aa2.2□□□□□ -2.06
VPS38YLR360W LAG2Q92325 660 aa2.2□□□□□ -2.06
VPS38YLR360W TDH3P00359 332 aaKnown RBP RIP-Chip data2.19□□□□□ -2.06 RIP-Chip
VPS38YLR360W MET2P08465 486 aa2.19□□□□□ -2.06
VPS38YLR360W TRX1P22217 103 aaKnown RBP2.19□□□□□ -2.06
VPS38YLR360W UTR5P32630 166 aa2.19□□□□□ -2.06
VPS38YLR360W MRPL6P32904 214 aa2.19□□□□□ -2.06
VPS38YLR360W AIM29P36154 155 aa2.19□□□□□ -2.06
VPS38YLR360W END3P39013 349 aa2.19□□□□□ -2.06
VPS38YLR360W INA22P40576 216 aa2.19□□□□□ -2.06
VPS38YLR360W YNL040WP53960 456 aaPredicted RBP2.19□□□□□ -2.06
VPS38YLR360W SEC13Q04491 297 aaKnown RBP2.19□□□□□ -2.06
VPS38YLR360W PBP4Q07362 185 aaKnown RBP2.19□□□□□ -2.06
VPS38YLR360W RLP24Q07915 199 aaKnown RBP2.19□□□□□ -2.06
VPS38YLR360W YPR1Q12458 312 aa2.19□□□□□ -2.06
VPS38YLR360W CDC37P06101 506 aaKnown RBP2.18□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 54.7 ms