RNA–Protein interactions for RNA: YKR059W

TIF1, Transcript of Translation initiation factor eIF4A, yeast

Gene TIF1, Length 1,188 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIF1	YKR059W	RTC2	P38279	296 aa		5.8	□□□□□ -1.48
TIF1	YKR059W	YHR127W	P38833	243 aa	Known RBP	5.8	□□□□□ -1.48
TIF1	YKR059W	IAH1	P41734	238 aa		5.8	□□□□□ -1.48
TIF1	YKR059W	YJR030C	P47101	745 aa		5.8	□□□□□ -1.48
TIF1	YKR059W	PKP2	P53170	491 aa		5.8	□□□□□ -1.48
TIF1	YKR059W	PCP1	P53259	346 aa		5.8	□□□□□ -1.48
TIF1	YKR059W	STD1	Q02794	444 aa		5.8	□□□□□ -1.48
TIF1	YKR059W	YMR034C	Q05131	434 aa	Predicted RBP	5.8	□□□□□ -1.48
TIF1	YKR059W	MED4	Q12343	284 aa		5.8	□□□□□ -1.48
TIF1	YKR059W	RRI1	Q12468	440 aa		5.8	□□□□□ -1.48
TIF1	YKR059W	YLR111W	Q12528	110 aa		5.8	□□□□□ -1.48
TIF1	YKR059W	RPL24A	P04449	155 aa	Known RBP	5.79	□□□□□ -1.48
TIF1	YKR059W	ARF1	P11076	181 aa	Known RBP	5.79	□□□□□ -1.48
TIF1	YKR059W	PRP16	P15938	1071 aa	Predicted RBP	5.79	□□□□□ -1.48
TIF1	YKR059W	URE2	P23202	354 aa	Known RBP	5.79	□□□□□ -1.48
TIF1	YKR059W	YCR007C	P25354	239 aa		5.79	□□□□□ -1.48
TIF1	YKR059W	YCR099C	P25657	155 aa		5.79	□□□□□ -1.48
TIF1	YKR059W	TPS2	P31688	896 aa	Known RBP	5.79	□□□□□ -1.48
TIF1	YKR059W	MEI5	P32489	222 aa		5.79	□□□□□ -1.48
TIF1	YKR059W	COX13	P32799	129 aa		5.79	□□□□□ -1.48
TIF1	YKR059W	MOH1	P38191	138 aa		5.79	□□□□□ -1.48
TIF1	YKR059W	PAC2	P39937	518 aa		5.79	□□□□□ -1.48
TIF1	YKR059W	HAT2	P39984	401 aa		5.79	□□□□□ -1.48
TIF1	YKR059W	HXT9	P40885	567 aa		5.79	□□□□□ -1.48
TIF1	YKR059W	TRM9	P49957	279 aa		5.79	□□□□□ -1.48
TIF1	YKR059W	EAF7	P53911	425 aa	Known RBP	5.79	□□□□□ -1.48
TIF1	YKR059W	NUP53	Q03790	475 aa		5.79	□□□□□ -1.48
TIF1	YKR059W	URH1	Q04179	340 aa		5.79	□□□□□ -1.48
TIF1	YKR059W	YET2	Q04210	160 aa		5.79	□□□□□ -1.48
TIF1	YKR059W	URC2	Q04411	772 aa		5.79	□□□□□ -1.48
TIF1	YKR059W	STE23	Q06010	1027 aa		5.79	□□□□□ -1.48
TIF1	YKR059W	ORM2	Q06144	216 aa		5.79	□□□□□ -1.48
TIF1	YKR059W	FAS1	P07149	2051 aa	Known RBP	5.78	□□□□□ -1.48
TIF1	YKR059W	YCR102C	P25608	368 aa		5.78	□□□□□ -1.48
TIF1	YKR059W	CPR3	P25719	182 aa		5.78	□□□□□ -1.48
TIF1	YKR059W	ADE1	P27616	306 aa		5.78	□□□□□ -1.48
TIF1	YKR059W	COQ3	P27680	312 aa		5.78	□□□□□ -1.48
TIF1	YKR059W	URA10	P30402	227 aa		5.78	□□□□□ -1.48
TIF1	YKR059W	PMT2	P31382	759 aa		5.78	□□□□□ -1.48
TIF1	YKR059W	MNS1	P32906	549 aa		5.78	□□□□□ -1.48
TIF1	YKR059W	SOL2	P37262	315 aa		5.78	□□□□□ -1.48
TIF1	YKR059W	POP4	P38336	279 aa		5.78	□□□□□ -1.48
TIF1	YKR059W	GGC1	P38988	300 aa		5.78	□□□□□ -1.48
TIF1	YKR059W	UTP18	P40362	594 aa	Predicted RBP	5.78	□□□□□ -1.48
TIF1	YKR059W	GCD14	P46959	383 aa	Predicted RBP	5.78	□□□□□ -1.48
TIF1	YKR059W	HOC1	P47124	396 aa		5.78	□□□□□ -1.48
TIF1	YKR059W	RIB4	P50861	169 aa	Predicted RBP	5.78	□□□□□ -1.48
TIF1	YKR059W	ATP23	P53722	227 aa		5.78	□□□□□ -1.48
TIF1	YKR059W	DBP6	P53734	629 aa	Known RBP	5.78	□□□□□ -1.48
TIF1	YKR059W	MPS1	P54199	764 aa		5.78	□□□□□ -1.48
TIF1	YKR059W	ERG13	P54839	491 aa	Known RBP	5.78	□□□□□ -1.48
TIF1	YKR059W	SGT1	Q08446	395 aa		5.78	□□□□□ -1.48
TIF1	YKR059W	AKR2	Q12013	749 aa		5.78	□□□□□ -1.48
TIF1	YKR059W	YOR114W	Q12219	294 aa		5.78	□□□□□ -1.48
TIF1	YKR059W	SPO24	Q3E752	67 aa		5.78	□□□□□ -1.48
TIF1	YKR059W	FSH3	Q99369	266 aa		5.78	□□□□□ -1.48
TIF1	YKR059W	CYR1	P08678	2026 aa	Known RBP	5.77	□□□□□ -1.49
TIF1	YKR059W	RPL12A	P0CX53	165 aa	Known RBP	5.77	□□□□□ -1.49
TIF1	YKR059W	RPL12B	P0CX54	165 aa		5.77	□□□□□ -1.49
TIF1	YKR059W	UNG1	P12887	359 aa		5.77	□□□□□ -1.49
TIF1	YKR059W	YPS1	P32329	569 aa		5.77	□□□□□ -1.49
TIF1	YKR059W	TPO5	P36029	618 aa		5.77	□□□□□ -1.49
TIF1	YKR059W	PHD1	P36093	366 aa		5.77	□□□□□ -1.49
TIF1	YKR059W	YHR122W	P38829	231 aa		5.77	□□□□□ -1.49
TIF1	YKR059W	IBA57	P47158	497 aa		5.77	□□□□□ -1.49
TIF1	YKR059W	YJR149W	P47177	404 aa		5.77	□□□□□ -1.49
TIF1	YKR059W	YGR015C	P53208	328 aa		5.77	□□□□□ -1.49
TIF1	YKR059W	BCH1	Q05029	724 aa		5.77	□□□□□ -1.49
TIF1	YKR059W	LDS2	Q08218	356 aa		5.77	□□□□□ -1.49
TIF1	YKR059W	ICT1	Q12385	394 aa		5.77	□□□□□ -1.49
TIF1	YKR059W	NSP1	P14907	823 aa	Known RBP	5.76	□□□□□ -1.49
TIF1	YKR059W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	5.76	□□□□□ -1.49	not detected
TIF1	YKR059W	ATO2	P32907	282 aa		5.76	□□□□□ -1.49
TIF1	YKR059W	OAR1	P35731	278 aa		5.76	□□□□□ -1.49
TIF1	YKR059W	YHR177W	P38867	453 aa		5.76	□□□□□ -1.49
TIF1	YKR059W	ISC1	P40015	477 aa	Known RBP	5.76	□□□□□ -1.49
TIF1	YKR059W	LYS12	P40495	371 aa	Known RBP	5.76	□□□□□ -1.49
TIF1	YKR059W	JHD2	P47156	728 aa	Predicted RBP	5.76	□□□□□ -1.49
TIF1	YKR059W	MDM34	P53083	459 aa		5.76	□□□□□ -1.49
TIF1	YKR059W	GPI15	P53961	229 aa		5.76	□□□□□ -1.49
TIF1	YKR059W	YMR087W	Q04299	284 aa		5.76	□□□□□ -1.49
TIF1	YKR059W	BCP1	Q06338	283 aa		5.76	□□□□□ -1.49
TIF1	YKR059W	YOR342C	Q12182	319 aa		5.76	□□□□□ -1.49
TIF1	YKR059W	RRP42	Q12277	265 aa	Predicted RBP	5.76	□□□□□ -1.49
TIF1	YKR059W	RNH203	Q12338	110 aa		5.76	□□□□□ -1.49
TIF1	YKR059W	ARG4	P04076	463 aa	Predicted RBP	5.75	□□□□□ -1.49
TIF1	YKR059W	OPI3	P05375	206 aa		5.75	□□□□□ -1.49
TIF1	YKR059W	MGR1	P25573	417 aa		5.75	□□□□□ -1.49
TIF1	YKR059W	YHI9	P38765	294 aa		5.75	□□□□□ -1.49
TIF1	YKR059W	YIL152W	P40455	235 aa		5.75	□□□□□ -1.49
TIF1	YKR059W	YIP1	P53039	248 aa		5.75	□□□□□ -1.49
TIF1	YKR059W	YNL260C	P53846	198 aa		5.75	□□□□□ -1.49
TIF1	YKR059W	SLT2	Q00772	484 aa		5.75	□□□□□ -1.49
TIF1	YKR059W	LGE1	Q02796	332 aa	Known RBP	5.75	□□□□□ -1.49
TIF1	YKR059W	CAC2	Q04199	468 aa		5.75	□□□□□ -1.49
TIF1	YKR059W	CDC123	Q05791	360 aa		5.75	□□□□□ -1.49
TIF1	YKR059W	BUR2	Q05949	395 aa		5.75	□□□□□ -1.49
TIF1	YKR059W	YLR173W	Q06247	608 aa		5.75	□□□□□ -1.49
TIF1	YKR059W	YPR022C	Q12139	1133 aa		5.75	□□□□□ -1.49
TIF1	YKR059W	YPR1	Q12458	312 aa		5.75	□□□□□ -1.49

Retrieved 100 of 5,963 RNA–protein pairs in 71 ms