RNA–Protein interactions for RNA: YDR293C

SSD1, Transcript of Translational repressor with a role in polar growth and wall integrity, yeastyeast

Gene SSD1, Length 3,753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSD1YDR293C GPX2P38143 162 aa2.09□□□□□ -2.07
SSD1YDR293C YBR137WP38276 179 aa2.09□□□□□ -2.07
SSD1YDR293C YHR177WP38867 453 aa2.09□□□□□ -2.07
SSD1YDR293C ZIM17P42844 174 aa2.09□□□□□ -2.07
SSD1YDR293C PRM10P42946 383 aa2.09□□□□□ -2.07
SSD1YDR293C FET5P43561 622 aa2.09□□□□□ -2.07
SSD1YDR293C JHD2P47156 728 aaPredicted RBP2.09□□□□□ -2.07
SSD1YDR293C RAI1P53063 387 aaKnown RBP2.09□□□□□ -2.07
SSD1YDR293C PAU12P53343 120 aa2.09□□□□□ -2.07
SSD1YDR293C PET191Q02772 108 aa2.09□□□□□ -2.07
SSD1YDR293C ARX1Q03862 593 aaKnown RBP2.09□□□□□ -2.07
SSD1YDR293C RVB1Q03940 463 aaKnown RBP2.09□□□□□ -2.07
SSD1YDR293C SWF1Q04629 336 aa2.09□□□□□ -2.07
SSD1YDR293C DCR2Q05924 578 aa2.09□□□□□ -2.07
SSD1YDR293C ARR1Q06596 294 aa2.09□□□□□ -2.07
SSD1YDR293C YPD1Q07688 167 aa2.09□□□□□ -2.07
SSD1YDR293C YOL029CQ08187 201 aa2.09□□□□□ -2.07
SSD1YDR293C YOR352WQ08816 343 aa2.09□□□□□ -2.07
SSD1YDR293C CMC2Q3E7A4 109 aa2.09□□□□□ -2.07
SSD1YDR293C GPM1P00950 247 aaKnown RBP2.09□□□□□ -2.08
SSD1YDR293C CDC7P06243 507 aa2.09□□□□□ -2.08
SSD1YDR293C SIR3P06701 978 aa2.09□□□□□ -2.08
SSD1YDR293C PEP4P07267 405 aaKnown RBP2.09□□□□□ -2.08
SSD1YDR293C ALG7P07286 448 aa2.09□□□□□ -2.08
SSD1YDR293C MRP1P10662 321 aaKnown RBP2.09□□□□□ -2.08
SSD1YDR293C AMD1P15274 810 aaKnown RBP2.09□□□□□ -2.08
SSD1YDR293C NUP1P20676 1076 aa2.09□□□□□ -2.08
SSD1YDR293C ADH7P25377 361 aa2.09□□□□□ -2.08
SSD1YDR293C NAM9P27929 486 aa2.09□□□□□ -2.08
SSD1YDR293C CAM1P29547 415 aaKnown RBP2.09□□□□□ -2.08
SSD1YDR293C SEC17P32602 292 aa2.09□□□□□ -2.08
SSD1YDR293C ARC19P33204 171 aaKnown RBP2.09□□□□□ -2.08
SSD1YDR293C PTC1P35182 281 aa2.09□□□□□ -2.08
SSD1YDR293C OMA1P36163 345 aa2.09□□□□□ -2.08
SSD1YDR293C YBR056WP38081 501 aa2.09□□□□□ -2.08
SSD1YDR293C MAL32P38158 584 aa2.09□□□□□ -2.08
SSD1YDR293C PTI1P39927 425 aaPredicted RBP2.09□□□□□ -2.08
SSD1YDR293C SOK1P40317 901 aa2.09□□□□□ -2.08
SSD1YDR293C SGN1P40561 250 aaKnown RBP RIP-Chip data2.09□□□□□ -2.08not detected
SSD1YDR293C MEP2P41948 499 aa2.09□□□□□ -2.08
SSD1YDR293C PFA3P42836 336 aa2.09□□□□□ -2.08
SSD1YDR293C RMD8P43620 662 aa2.09□□□□□ -2.08
SSD1YDR293C IMD4P50094 524 aaKnown RBP2.09□□□□□ -2.08
SSD1YDR293C YGL204CP53089 101 aa2.09□□□□□ -2.08
SSD1YDR293C LSM7P53905 115 aaKnown RBP2.09□□□□□ -2.08
SSD1YDR293C TPS1Q00764 495 aaKnown RBP2.09□□□□□ -2.08
SSD1YDR293C FIN1Q03898 291 aa2.09□□□□□ -2.08
SSD1YDR293C BOP2Q06150 570 aa2.09□□□□□ -2.08
SSD1YDR293C YLR030WQ07967 263 aa2.09□□□□□ -2.08
SSD1YDR293C PFA4Q12006 378 aa2.09□□□□□ -2.08
SSD1YDR293C DET1Q99288 334 aaKnown RBP2.09□□□□□ -2.08
SSD1YDR293C CHO1P08456 276 aa2.08□□□□□ -2.08
SSD1YDR293C SPS2P08459 502 aa2.08□□□□□ -2.08
SSD1YDR293C PET54P10834 293 aa2.08□□□□□ -2.08
SSD1YDR293C NHP6BP11633 99 aaKnown RBP2.08□□□□□ -2.08
SSD1YDR293C RPL3P14126 387 aaKnown RBP2.08□□□□□ -2.08
SSD1YDR293C ART10P18634 518 aaKnown RBP2.08□□□□□ -2.08
SSD1YDR293C PDE1P22434 369 aa2.08□□□□□ -2.08
SSD1YDR293C PTP1P25044 335 aa2.08□□□□□ -2.08
SSD1YDR293C ATG22P25568 528 aa2.08□□□□□ -2.08
SSD1YDR293C URK1P27515 501 aa2.08□□□□□ -2.08
SSD1YDR293C SFC1P33303 322 aa2.08□□□□□ -2.08
SSD1YDR293C APL3P38065 1025 aa2.08□□□□□ -2.08
SSD1YDR293C RRN10P38204 145 aa2.08□□□□□ -2.08
SSD1YDR293C CHL4P38907 458 aa2.08□□□□□ -2.08
SSD1YDR293C MPM1P40364 252 aa2.08□□□□□ -2.08
SSD1YDR293C ERG10P41338 398 aaKnown RBP2.08□□□□□ -2.08
SSD1YDR293C SYS1P41544 203 aa2.08□□□□□ -2.08
SSD1YDR293C ATG18P43601 500 aa2.08□□□□□ -2.08
SSD1YDR293C EFM3P47163 339 aa2.08□□□□□ -2.08
SSD1YDR293C PUS4P48567 403 aaKnown RBP2.08□□□□□ -2.08
SSD1YDR293C SAY1P53324 424 aa2.08□□□□□ -2.08
SSD1YDR293C EMI1Q04406 187 aa2.08□□□□□ -2.08
SSD1YDR293C REX4Q08237 289 aa2.08□□□□□ -2.08
SSD1YDR293C YNG1Q08465 219 aa2.08□□□□□ -2.08
SSD1YDR293C RDR1Q08904 546 aa2.08□□□□□ -2.08
SSD1YDR293C YOR032W-AQ8TGS1 66 aa2.08□□□□□ -2.08
SSD1YDR293C CYC1P00044 109 aaPredicted RBP2.08□□□□□ -2.08
SSD1YDR293C CBS1P14066 229 aa2.08□□□□□ -2.08
SSD1YDR293C YCR101CP25607 182 aa2.08□□□□□ -2.08
SSD1YDR293C RFA3P26755 122 aaKnown RBP2.08□□□□□ -2.08
SSD1YDR293C LDS1P31379 325 aa2.08□□□□□ -2.08
SSD1YDR293C WBP1P33767 430 aaKnown RBP2.08□□□□□ -2.08
SSD1YDR293C CLG1P35190 452 aa2.08□□□□□ -2.08
SSD1YDR293C YKL071WP36086 256 aa2.08□□□□□ -2.08
SSD1YDR293C MRPL15P36523 253 aa2.08□□□□□ -2.08
SSD1YDR293C TRR2P38816 342 aa2.08□□□□□ -2.08
SSD1YDR293C CAK1P43568 368 aaPredicted RBP2.08□□□□□ -2.08
SSD1YDR293C GAT1P43574 510 aa2.08□□□□□ -2.08
SSD1YDR293C IRC18P47056 224 aa2.08□□□□□ -2.08
SSD1YDR293C YAP1802P53309 568 aa2.08□□□□□ -2.08
SSD1YDR293C NRK1P53915 240 aa2.08□□□□□ -2.08
SSD1YDR293C ATG21Q02887 496 aa2.08□□□□□ -2.08
SSD1YDR293C DTD1Q07648 150 aaKnown RBP2.08□□□□□ -2.08
SSD1YDR293C YOL107WQ12239 342 aa2.08□□□□□ -2.08
SSD1YDR293C SKS1Q12505 502 aa2.08□□□□□ -2.08
SSD1YDR293C SAM35P14693 329 aa2.08□□□□□ -2.08
SSD1YDR293C EXG1P23776 448 aaKnown RBP2.08□□□□□ -2.08
SSD1YDR293C RSC6P25632 483 aa2.08□□□□□ -2.08
SSD1YDR293C ERV1P27882 189 aa2.08□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 60.2 ms