RNA–Protein interactions for RNA: YDR073W

SNF11, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeast

Gene SNF11, Length 510 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNF11	YDR073W	TRM82	Q03774	444 aa		4.9	□□□□□ -1.63
SNF11	YDR073W	YPR091C	Q06833	770 aa		4.9	□□□□□ -1.63
SNF11	YDR073W	TMS1	Q12116	473 aa		4.9	□□□□□ -1.63
SNF11	YDR073W	YPR064W	Q12492	139 aa		4.9	□□□□□ -1.63
SNF11	YDR073W	YNL162W-A	Q3E7A8	72 aa		4.9	□□□□□ -1.63
SNF11	YDR073W	HEM4	P06174	275 aa		4.89	□□□□□ -1.63
SNF11	YDR073W	RPL23A	P0CX41	137 aa	Known RBP	4.89	□□□□□ -1.63
SNF11	YDR073W	RPL23B	P0CX42	137 aa	Known RBP	4.89	□□□□□ -1.63
SNF11	YDR073W	ATS1	P31386	333 aa		4.89	□□□□□ -1.63
SNF11	YDR073W	MRPL6	P32904	214 aa		4.89	□□□□□ -1.63
SNF11	YDR073W	PRS2	P38620	318 aa	Known RBP	4.89	□□□□□ -1.63
SNF11	YDR073W	MET30	P39014	640 aa		4.89	□□□□□ -1.63
SNF11	YDR073W	RPH1	P39956	796 aa		4.89	□□□□□ -1.63
SNF11	YDR073W	HAC1	P41546	238 aa		4.89	□□□□□ -1.63
SNF11	YDR073W	GDS1	P41913	522 aa		4.89	□□□□□ -1.63
SNF11	YDR073W	SCS3	P53012	380 aa		4.89	□□□□□ -1.63
SNF11	YDR073W	WSC2	P53832	503 aa		4.89	□□□□□ -1.63
SNF11	YDR073W	REX2	P54964	269 aa	Known RBP	4.89	□□□□□ -1.63
SNF11	YDR073W	SPO77	Q06134	477 aa		4.89	□□□□□ -1.63
SNF11	YDR073W	CTR3	Q06686	241 aa		4.89	□□□□□ -1.63
SNF11	YDR073W	DIB1	Q06819	143 aa	Predicted RBP	4.89	□□□□□ -1.63
SNF11	YDR073W	YDL114W	Q07530	308 aa		4.89	□□□□□ -1.63
SNF11	YDR073W	HMS1	Q12398	434 aa		4.89	□□□□□ -1.63
SNF11	YDR073W	TRP1	P00912	224 aa		4.88	□□□□□ -1.63
SNF11	YDR073W	SPS100	P13130	326 aa		4.88	□□□□□ -1.63
SNF11	YDR073W	TFS1	P14306	219 aa		4.88	□□□□□ -1.63
SNF11	YDR073W	RNA15	P25299	296 aa	Predicted RBP	4.88	□□□□□ -1.63
SNF11	YDR073W	CPR3	P25719	182 aa		4.88	□□□□□ -1.63
SNF11	YDR073W	INO2	P26798	304 aa		4.88	□□□□□ -1.63
SNF11	YDR073W	VMA6	P32366	345 aa	Known RBP	4.88	□□□□□ -1.63
SNF11	YDR073W	ARC19	P33204	171 aa	Known RBP	4.88	□□□□□ -1.63
SNF11	YDR073W	KTI12	P34253	313 aa	Known RBP	4.88	□□□□□ -1.63
SNF11	YDR073W	MCH2	P36032	473 aa		4.88	□□□□□ -1.63
SNF11	YDR073W	NPT1	P39683	429 aa	Known RBP	4.88	□□□□□ -1.63
SNF11	YDR073W	THO1	P40040	218 aa	Known RBP	4.88	□□□□□ -1.63
SNF11	YDR073W	RFC4	P40339	323 aa	Known RBP	4.88	□□□□□ -1.63
SNF11	YDR073W	RPL10	P41805	221 aa	Known RBP	4.88	□□□□□ -1.63
SNF11	YDR073W	CIN2	P46670	268 aa		4.88	□□□□□ -1.63
SNF11	YDR073W	MTQ1	P53944	314 aa		4.88	□□□□□ -1.63
SNF11	YDR073W	YMR226C	Q05016	267 aa	Known RBP	4.88	□□□□□ -1.63
SNF11	YDR073W	FRE8	Q12209	686 aa		4.88	□□□□□ -1.63
SNF11	YDR073W	YGK3	Q12222	375 aa	Predicted RBP	4.88	□□□□□ -1.63
SNF11	YDR073W	TFC7	Q12415	435 aa		4.88	□□□□□ -1.63
SNF11	YDR073W	SNF8	Q12483	233 aa		4.88	□□□□□ -1.63
SNF11	YDR073W	THP2	O13539	261 aa	Known RBP	4.87	□□□□□ -1.63
SNF11	YDR073W	RPS18A	P0CX55	146 aa	Known RBP	4.87	□□□□□ -1.63
SNF11	YDR073W	RPS18B	P0CX56	146 aa	Predicted RBP	4.87	□□□□□ -1.63
SNF11	YDR073W	NAM2	P11325	894 aa		4.87	□□□□□ -1.63
SNF11	YDR073W	STE18	P18852	110 aa		4.87	□□□□□ -1.63
SNF11	YDR073W	YPK2	P18961	677 aa		4.87	□□□□□ -1.63
SNF11	YDR073W	DEP1	P31385	405 aa		4.87	□□□□□ -1.63
SNF11	YDR073W	ASK1	P35734	292 aa		4.87	□□□□□ -1.63
SNF11	YDR073W	YPC1	P38298	316 aa		4.87	□□□□□ -1.63
SNF11	YDR073W	IDP2	P41939	412 aa		4.87	□□□□□ -1.63
SNF11	YDR073W	UBC13	P52490	153 aa		4.87	□□□□□ -1.63
SNF11	YDR073W	SCW4	P53334	386 aa	Known RBP	4.87	□□□□□ -1.63
SNF11	YDR073W	SNZ1	Q03148	297 aa		4.87	□□□□□ -1.63
SNF11	YDR073W	SNA4	Q07549	140 aa		4.87	□□□□□ -1.63
SNF11	YDR073W	SLM3	Q12093	417 aa		4.87	□□□□□ -1.63
SNF11	YDR073W	SAL1	D6W196	494 aa		4.86	□□□□□ -1.63
SNF11	YDR073W	CYC3	P06182	269 aa		4.86	□□□□□ -1.63
SNF11	YDR073W	KSS1	P14681	368 aa		4.86	□□□□□ -1.63
SNF11	YDR073W	CHA1	P25379	360 aa	Known RBP	4.86	□□□□□ -1.63
SNF11	YDR073W	POF1	P25576	258 aa		4.86	□□□□□ -1.63
SNF11	YDR073W	FUN26	P31381	517 aa		4.86	□□□□□ -1.63
SNF11	YDR073W	PRP18	P33411	251 aa	Predicted RBP	4.86	□□□□□ -1.63
SNF11	YDR073W	RIB1	P38066	345 aa		4.86	□□□□□ -1.63
SNF11	YDR073W	MRX3	P38172	270 aa		4.86	□□□□□ -1.63
SNF11	YDR073W	MIC12	P38341	106 aa		4.86	□□□□□ -1.63
SNF11	YDR073W	SOP4	P39543	234 aa	Predicted RBP	4.86	□□□□□ -1.63
SNF11	YDR073W	YRB1	P41920	201 aa	Known RBP	4.86	□□□□□ -1.63
SNF11	YDR073W	SAD1	P43589	448 aa		4.86	□□□□□ -1.63
SNF11	YDR073W	ASG7	P46993	209 aa		4.86	□□□□□ -1.63
SNF11	YDR073W	HAM1	P47119	197 aa	Known RBP	4.86	□□□□□ -1.63
SNF11	YDR073W	CUS2	P53830	285 aa	Predicted RBP	4.86	□□□□□ -1.63
SNF11	YDR073W	DCR2	Q05924	578 aa		4.86	□□□□□ -1.63
SNF11	YDR073W	DTD1	Q07648	150 aa	Known RBP	4.86	□□□□□ -1.63
SNF11	YDR073W	PER33	Q12144	273 aa		4.86	□□□□□ -1.63
SNF11	YDR073W	YDL199C	Q12407	687 aa		4.86	□□□□□ -1.63
SNF11	YDR073W	NCB2	Q92317	146 aa		4.86	□□□□□ -1.63
SNF11	YDR073W	SEY1	Q99287	776 aa		4.86	□□□□□ -1.63
SNF11	YDR073W	CDC33	P07260	213 aa	Known RBP	4.85	□□□□□ -1.63
SNF11	YDR073W	PDC2	P32896	925 aa		4.85	□□□□□ -1.63
SNF11	YDR073W	SPT4	P32914	102 aa	Predicted RBP	4.85	□□□□□ -1.63
SNF11	YDR073W	SDS24	P38314	527 aa		4.85	□□□□□ -1.63
SNF11	YDR073W	SLX1	P38324	304 aa		4.85	□□□□□ -1.63
SNF11	YDR073W	YND1	P40009	630 aa		4.85	□□□□□ -1.63
SNF11	YDR073W	PRM5	P40476	318 aa		4.85	□□□□□ -1.63
SNF11	YDR073W	MOB2	P43563	287 aa		4.85	□□□□□ -1.63
SNF11	YDR073W	YJR012C	P47087	207 aa		4.85	□□□□□ -1.63
SNF11	YDR073W	NBP1	P52919	319 aa	Predicted RBP	4.85	□□□□□ -1.63
SNF11	YDR073W	GAS2	Q06135	555 aa		4.85	□□□□□ -1.63
SNF11	YDR073W	SFH1	Q06168	426 aa		4.85	□□□□□ -1.63
SNF11	YDR073W	MRX9	Q07349	420 aa	Known RBP	4.85	□□□□□ -1.63
SNF11	YDR073W	CSM4	Q08955	156 aa		4.85	□□□□□ -1.63
SNF11	YDR073W	YRA1	Q12159	226 aa	Known RBP	4.85	□□□□□ -1.63
SNF11	YDR073W	TCP1	P12612	559 aa	Known RBP	4.84	□□□□□ -1.63
SNF11	YDR073W	YCR043C	P25361	127 aa		4.84	□□□□□ -1.63
SNF11	YDR073W	CBT1	P36038	271 aa	Predicted RBP	4.84	□□□□□ -1.63
SNF11	YDR073W	VEL1	P53058	206 aa		4.84	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 112.9 ms