RNA–Protein interactions for RNA: YDL003W

MCD1, Transcript of Essential alpha-kleisin subunit of the cohesin complex, yeastyeast

Gene MCD1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MCD1YDL003W YLR126CQ12288 251 aa2.07□□□□□ -2.08
MCD1YDL003W PST2Q12335 198 aaKnown RBP2.07□□□□□ -2.08
MCD1YDL003W YDL199CQ12407 687 aa2.07□□□□□ -2.08
MCD1YDL003W AHC1Q12433 566 aa2.07□□□□□ -2.08
MCD1YDL003W RRI1Q12468 440 aa2.07□□□□□ -2.08
MCD1YDL003W PRM4Q12498 284 aa2.07□□□□□ -2.08
MCD1YDL003W SFG1Q12507 346 aa2.07□□□□□ -2.08
MCD1YDL003W YGL194C-AQ2V2P6 80 aa2.07□□□□□ -2.08
MCD1YDL003W TMA7Q3E764 64 aaKnown RBP2.07□□□□□ -2.08
MCD1YDL003W YMR230W-AQ3E7B5 62 aa2.07□□□□□ -2.08
MCD1YDL003W MHF2Q3E829 80 aa2.07□□□□□ -2.08
MCD1YDL003W COA6Q3E846 104 aa2.07□□□□□ -2.08
MCD1YDL003W YER175W-AQ8TGU4 54 aa2.07□□□□□ -2.08
MCD1YDL003W FLO11P08640 1367 aa2.06□□□□□ -2.08
MCD1YDL003W ILV1P00927 576 aaKnown RBP2.06□□□□□ -2.08
MCD1YDL003W HTB1P02293 131 aaKnown RBP2.06□□□□□ -2.08
MCD1YDL003W HTB2P02294 131 aa2.06□□□□□ -2.08
MCD1YDL003W DST1P07273 309 aa2.06□□□□□ -2.08
MCD1YDL003W GCY1P14065 312 aaKnown RBP RIP-Chip data2.06□□□□□ -2.08not detected
MCD1YDL003W URA6P15700 204 aa2.06□□□□□ -2.08
MCD1YDL003W ERD1P16151 362 aa2.06□□□□□ -2.08
MCD1YDL003W SEC59P20048 519 aa2.06□□□□□ -2.08
MCD1YDL003W PPH22P23595 377 aa2.06□□□□□ -2.08
MCD1YDL003W RNA14P25298 677 aaKnown RBP2.06□□□□□ -2.08
MCD1YDL003W AHC2P25649 128 aa2.06□□□□□ -2.08
MCD1YDL003W CDC50P25656 391 aa2.06□□□□□ -2.08
MCD1YDL003W SNC1P31109 117 aa2.06□□□□□ -2.08
MCD1YDL003W DEG1P31115 442 aaKnown RBP2.06□□□□□ -2.08
MCD1YDL003W ARP2P32381 391 aaKnown RBP2.06□□□□□ -2.08
MCD1YDL003W CDC5P32562 705 aa2.06□□□□□ -2.08
MCD1YDL003W NRP1P32770 719 aaKnown RBP RIP-Chip data2.06□□□□□ -2.08not detected
MCD1YDL003W COX13P32799 129 aa2.06□□□□□ -2.08
MCD1YDL003W SEF1P34228 1148 aa2.06□□□□□ -2.08
MCD1YDL003W SOL2P37262 315 aa2.06□□□□□ -2.08
MCD1YDL003W RTC2P38279 296 aa2.06□□□□□ -2.08
MCD1YDL003W DHH1P39517 506 aaKnown RBP2.06□□□□□ -2.08
MCD1YDL003W RFC4P40339 323 aaKnown RBP2.06□□□□□ -2.08
MCD1YDL003W TMA108P40462 946 aa2.06□□□□□ -2.08
MCD1YDL003W POG1P40473 351 aa2.06□□□□□ -2.08
MCD1YDL003W FMC1P40491 155 aa2.06□□□□□ -2.08
MCD1YDL003W MAD2P40958 196 aa2.06□□□□□ -2.08
MCD1YDL003W AGX1P43567 385 aa2.06□□□□□ -2.08
MCD1YDL003W SIP4P46954 829 aa2.06□□□□□ -2.08
MCD1YDL003W DIA3P52290 468 aa2.06□□□□□ -2.08
MCD1YDL003W COS12P53053 380 aa2.06□□□□□ -2.08
MCD1YDL003W SWC4P53201 476 aa2.06□□□□□ -2.08
MCD1YDL003W YNR029CP53729 429 aaKnown RBP2.06□□□□□ -2.08
MCD1YDL003W OCA2P53949 197 aa2.06□□□□□ -2.08
MCD1YDL003W LSM3P57743 89 aaKnown RBP2.06□□□□□ -2.08
MCD1YDL003W MRPS16Q02608 121 aa2.06□□□□□ -2.08
MCD1YDL003W UBP16Q02863 499 aa2.06□□□□□ -2.08
MCD1YDL003W SPC19Q03954 165 aa2.06□□□□□ -2.08
MCD1YDL003W CAC2Q04199 468 aa2.06□□□□□ -2.08
MCD1YDL003W SMA2Q04658 369 aa2.06□□□□□ -2.08
MCD1YDL003W YDR222WQ04925 415 aa2.06□□□□□ -2.08
MCD1YDL003W INM2Q05533 292 aa2.06□□□□□ -2.08
MCD1YDL003W YDR278CQ05612 105 aa2.06□□□□□ -2.08
MCD1YDL003W PFA4Q12006 378 aa2.06□□□□□ -2.08
MCD1YDL003W RTN2Q12443 393 aa2.06□□□□□ -2.08
MCD1YDL003W RMD5Q12508 421 aa2.06□□□□□ -2.08
MCD1YDL003W MEX67Q99257 599 aaKnown RBP2.06□□□□□ -2.08
MCD1YDL003W TIM9O74700 87 aa2.05□□□□□ -2.08
MCD1YDL003W CHS1P08004 1131 aa2.05□□□□□ -2.08
MCD1YDL003W RPL31AP0C2H8 113 aaKnown RBP2.05□□□□□ -2.08
MCD1YDL003W RPL31BP0C2H9 113 aaKnown RBP2.05□□□□□ -2.08
MCD1YDL003W HOM3P10869 527 aa2.05□□□□□ -2.08
MCD1YDL003W NAM2P11325 894 aa2.05□□□□□ -2.08
MCD1YDL003W HAP3P13434 144 aa2.05□□□□□ -2.08
MCD1YDL003W RPL8AP17076 256 aaKnown RBP2.05□□□□□ -2.08
MCD1YDL003W MDH1P17505 334 aaKnown RBP RIP-Chip data2.05□□□□□ -2.08not detected
MCD1YDL003W PET9P18239 318 aaKnown RBP2.05□□□□□ -2.08
MCD1YDL003W SNF6P18888 332 aa2.05□□□□□ -2.08
MCD1YDL003W COX11P19516 300 aaKnown RBP2.05□□□□□ -2.08
MCD1YDL003W DAL81P21657 970 aa2.05□□□□□ -2.08
MCD1YDL003W DBR1P24309 405 aaKnown RBP2.05□□□□□ -2.08
MCD1YDL003W DAL2P25335 343 aa2.05□□□□□ -2.08
MCD1YDL003W STE50P25344 346 aa2.05□□□□□ -2.08
MCD1YDL003W BEM1P29366 551 aa2.05□□□□□ -2.08
MCD1YDL003W SFP1P32432 683 aa2.05□□□□□ -2.08
MCD1YDL003W DPH2P32461 534 aa2.05□□□□□ -2.08
MCD1YDL003W MRPL6P32904 214 aa2.05□□□□□ -2.08
MCD1YDL003W ECT1P33412 323 aa2.05□□□□□ -2.08
MCD1YDL003W ZRT3P34240 503 aa2.05□□□□□ -2.08
MCD1YDL003W TMA19P35691 167 aaKnown RBP2.05□□□□□ -2.08
MCD1YDL003W COS9P36034 407 aa2.05□□□□□ -2.08
MCD1YDL003W YKL075CP36083 450 aa2.05□□□□□ -2.08
MCD1YDL003W HMT1P38074 348 aa2.05□□□□□ -2.08
MCD1YDL003W AVT5P38176 459 aa2.05□□□□□ -2.08
MCD1YDL003W RRN10P38204 145 aa2.05□□□□□ -2.08
MCD1YDL003W ATG12P38316 186 aa2.05□□□□□ -2.08
MCD1YDL003W RRP4P38792 359 aaKnown RBP2.05□□□□□ -2.08
MCD1YDL003W UBA4P38820 440 aa2.05□□□□□ -2.08
MCD1YDL003W MDM31P38880 579 aa2.05□□□□□ -2.08
MCD1YDL003W ALP1P38971 573 aa2.05□□□□□ -2.08
MCD1YDL003W GDI1P39958 451 aaKnown RBP2.05□□□□□ -2.08
MCD1YDL003W YEN1P40028 759 aa2.05□□□□□ -2.08
MCD1YDL003W PCL6P40038 420 aa2.05□□□□□ -2.08
MCD1YDL003W RPL10P41805 221 aaKnown RBP2.05□□□□□ -2.08
MCD1YDL003W GLR1P41921 483 aaKnown RBP2.05□□□□□ -2.08
MCD1YDL003W ERR3P42222 437 aa2.05□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 31.5 ms