RNA–Protein interactions for RNA: ENST00000580182.5

PPP4R1-215, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-215ENST00000580182 LRRC15Q8TF66 581 aa20.69■□□□□ 0.9
PPP4R1-215ENST00000580182 CLP1Q92989 425 aaKnown RBP20.69■□□□□ 0.9
PPP4R1-215ENST00000580182 AK8Q96MA6 479 aa20.69■□□□□ 0.9
PPP4R1-215ENST00000580182 SAMD11Q96NU1 681 aa20.69■□□□□ 0.9
PPP4R1-215ENST00000580182 RUSC1Q9BVN2 902 aa20.69■□□□□ 0.9
PPP4R1-215ENST00000580182 TSPAN1O60635 241 aa20.68■□□□□ 0.9
PPP4R1-215ENST00000580182 POU3F3P20264 500 aaPredicted RBP20.68■□□□□ 0.9
PPP4R1-215ENST00000580182 LONP1P36776 959 aaKnown RBP20.68■□□□□ 0.9
PPP4R1-215ENST00000580182 AMHR2Q16671 573 aa20.68■□□□□ 0.9
PPP4R1-215ENST00000580182 TMEM119Q4V9L6 283 aa20.68■□□□□ 0.9
PPP4R1-215ENST00000580182 CLLU1OSQ5K130 101 aa20.68■□□□□ 0.9
PPP4R1-215ENST00000580182 SPECC1Q5M775 1068 aa20.68■□□□□ 0.9
PPP4R1-215ENST00000580182 UBXN11Q5T124 520 aa20.68■□□□□ 0.9
PPP4R1-215ENST00000580182 RINT1Q6NUQ1 792 aa20.68■□□□□ 0.9
PPP4R1-215ENST00000580182 LPPQ93052 612 aa20.68■□□□□ 0.9
PPP4R1-215ENST00000580182 CPB2Q96IY4 423 aa20.68■□□□□ 0.9
PPP4R1-215ENST00000580182 CLIC6Q96NY7 704 aa20.68■□□□□ 0.9
PPP4R1-215ENST00000580182 CASD1Q96PB1 797 aa20.68■□□□□ 0.9
PPP4R1-215ENST00000580182 CSRNP2Q9H175 543 aa20.68■□□□□ 0.9
PPP4R1-215ENST00000580182 FAM105AQ9NUU6 356 aa20.68■□□□□ 0.9
PPP4R1-215ENST00000580182 RNF216Q9NWF9 866 aaPredicted RBP20.68■□□□□ 0.9
PPP4R1-215ENST00000580182 FBXO2Q9UK22 296 aaPredicted RBP20.68■□□□□ 0.9
PPP4R1-215ENST00000580182 KIAA1671Q9BY89 1806 aa20.68■□□□□ 0.9
PPP4R1-215ENST00000580182 RALGAPA2Q2PPJ7 1873 aa20.68■□□□□ 0.9
PPP4R1-215ENST00000580182 PRUNE2Q8WUY3 3088 aa20.68■□□□□ 0.9
PPP4R1-215ENST00000580182 MEIS3P2A8K0S8 358 aa20.67■□□□□ 0.9
PPP4R1-215ENST00000580182 H3BNC9 293 aa20.67■□□□□ 0.9
PPP4R1-215ENST00000580182 B4GALT5O43286 388 aa20.67■□□□□ 0.9
PPP4R1-215ENST00000580182 GTPBP6O43824 516 aaPredicted RBP20.67■□□□□ 0.9
PPP4R1-215ENST00000580182 ERLIN2O94905 339 aa20.67■□□□□ 0.9
PPP4R1-215ENST00000580182 UBA7P41226 1012 aa20.67■□□□□ 0.9
PPP4R1-215ENST00000580182 GPM6BQ13491 265 aa20.67■□□□□ 0.9
PPP4R1-215ENST00000580182 C1orf186Q6ZWK4 172 aa20.67■□□□□ 0.9
PPP4R1-215ENST00000580182 USP49Q70CQ1 688 aa20.67■□□□□ 0.9
PPP4R1-215ENST00000580182 CDK5RAP3Q96JB5 506 aa20.67■□□□□ 0.9
PPP4R1-215ENST00000580182 TRAIPQ9BWF2 469 aa20.67■□□□□ 0.9
PPP4R1-215ENST00000580182 NFKBIZQ9BYH8 718 aa20.67■□□□□ 0.9
PPP4R1-215ENST00000580182 NT5C3AQ9H0P0 336 aa20.67■□□□□ 0.9
PPP4R1-215ENST00000580182 PRDM6Q9NQX0 595 aa20.67■□□□□ 0.9
PPP4R1-215ENST00000580182 TYW1Q9NV66 732 aaKnown RBP20.67■□□□□ 0.9
PPP4R1-215ENST00000580182 REV3LO60673 3130 aa20.67■□□□□ 0.9
PPP4R1-215ENST00000580182 C5orf67F2Z3F1 127 aa20.66■□□□□ 0.9
PPP4R1-215ENST00000580182 HIP1RO75146 1068 aa20.66■□□□□ 0.9
PPP4R1-215ENST00000580182 EOMESO95936 686 aa20.66■□□□□ 0.9
PPP4R1-215ENST00000580182 SSBP05455 408 aaKnown RBP eCLIP20.66■□□□□ 0.9
PPP4R1-215ENST00000580182 ZSCAN22P10073 491 aaPredicted RBP20.66■□□□□ 0.9
PPP4R1-215ENST00000580182 KARSQ15046 597 aaKnown RBP20.66■□□□□ 0.9
PPP4R1-215ENST00000580182 FOXD4L6Q3SYB3 417 aaPredicted RBP20.66■□□□□ 0.9
PPP4R1-215ENST00000580182 CDCA2Q69YH5 1023 aaPredicted RBP20.66■□□□□ 0.9
PPP4R1-215ENST00000580182 FOXD4L3Q6VB84 417 aaPredicted RBP20.66■□□□□ 0.9
PPP4R1-215ENST00000580182 LRRC55Q6ZSA7 311 aa20.66■□□□□ 0.9
PPP4R1-215ENST00000580182 DAW1Q8N136 415 aa20.66■□□□□ 0.9
PPP4R1-215ENST00000580182 HELQQ8TDG4 1101 aa20.66■□□□□ 0.9
PPP4R1-215ENST00000580182 KIFC3Q9BVG8 833 aa20.66■□□□□ 0.9
PPP4R1-215ENST00000580182 TMEM117Q9H0C3 514 aa20.66■□□□□ 0.9
PPP4R1-215ENST00000580182 TFIP11Q9UBB9 837 aaKnown RBP20.66■□□□□ 0.9
PPP4R1-215ENST00000580182 PRRC2BQ5JSZ5 2229 aaKnown RBP20.66■□□□□ 0.9
PPP4R1-215ENST00000580182 PLA2G4BP0C869 781 aa20.65■□□□□ 0.9
PPP4R1-215ENST00000580182 ARF4P18085 180 aaPredicted RBP20.65■□□□□ 0.9
PPP4R1-215ENST00000580182 SLC12A3P55017 1021 aa20.65■□□□□ 0.9
PPP4R1-215ENST00000580182 RAD51AP2Q09MP3 1159 aa20.65■□□□□ 0.9
PPP4R1-215ENST00000580182 SLC39A14Q15043 492 aa20.65■□□□□ 0.9
PPP4R1-215ENST00000580182 CDR2LQ86X02 465 aaPredicted RBP20.65■□□□□ 0.9
PPP4R1-215ENST00000580182 SYT2Q8N9I0 419 aaPredicted RBP20.65■□□□□ 0.9
PPP4R1-215ENST00000580182 CALML4Q96GE6 196 aa20.65■□□□□ 0.9
PPP4R1-215ENST00000580182 EPSTI1Q96J88 318 aa20.65■□□□□ 0.9
PPP4R1-215ENST00000580182 EIF2AQ9BY44 585 aaKnown RBP20.65■□□□□ 0.9
PPP4R1-215ENST00000580182 CWH43Q9H720 699 aa20.65■□□□□ 0.9
PPP4R1-215ENST00000580182 USP20Q9Y2K6 914 aa20.65■□□□□ 0.9
PPP4R1-215ENST00000580182 RWDD3Q9Y3V2 267 aa20.65■□□□□ 0.9
PPP4R1-215ENST00000580182 PCDHB2Q9Y5E7 798 aa20.65■□□□□ 0.9
PPP4R1-215ENST00000580182 SRPRBQ9Y5M8 271 aaKnown RBP20.65■□□□□ 0.9
PPP4R1-215ENST00000580182 MYH15Q9Y2K3 1946 aa20.65■□□□□ 0.9
PPP4R1-215ENST00000580182 TTLL13PA6NNM8 815 aa20.64■□□□□ 0.89
PPP4R1-215ENST00000580182 GRM6O15303 877 aa20.64■□□□□ 0.89
PPP4R1-215ENST00000580182 HOXA2O43364 376 aa20.64■□□□□ 0.89
PPP4R1-215ENST00000580182 ZNF623O75123 536 aa20.64■□□□□ 0.89
PPP4R1-215ENST00000580182 F13A1P00488 732 aa20.64■□□□□ 0.89
PPP4R1-215ENST00000580182 RB1P06400 928 aa20.64■□□□□ 0.89
PPP4R1-215ENST00000580182 PLCG1P19174 1290 aa20.64■□□□□ 0.89
PPP4R1-215ENST00000580182 NAMPTP43490 491 aa20.64■□□□□ 0.89
PPP4R1-215ENST00000580182 NASPP49321 788 aaPredicted RBP20.64■□□□□ 0.89
PPP4R1-215ENST00000580182 MAPK7Q13164 816 aa20.64■□□□□ 0.89
PPP4R1-215ENST00000580182 PCBP1Q15365 356 aaKnown RBP eCLIP20.64■□□□□ 0.89
PPP4R1-215ENST00000580182 SPOUT1Q5T280 376 aaKnown RBP20.64■□□□□ 0.89
PPP4R1-215ENST00000580182 ZBTB8OSQ8IWT0 167 aa20.64■□□□□ 0.89
PPP4R1-215ENST00000580182 ABI1Q8IZP0 508 aa20.64■□□□□ 0.89
PPP4R1-215ENST00000580182 KIFAP3Q92845 792 aa20.64■□□□□ 0.89
PPP4R1-215ENST00000580182 ALG13Q9NP73 1137 aaKnown RBP20.64■□□□□ 0.89
PPP4R1-215ENST00000580182 BLOC1S4Q9NUP1 217 aa20.64■□□□□ 0.89
PPP4R1-215ENST00000580182 NPHP3-ACAD11A0A0J9YXS1 232 aa20.63■□□□□ 0.89
PPP4R1-215ENST00000580182 SFI1A8K8P3 1242 aa20.63■□□□□ 0.89
PPP4R1-215ENST00000580182 CSPG5O95196 566 aa20.63■□□□□ 0.89
PPP4R1-215ENST00000580182 EDN1P05305 212 aa20.63■□□□□ 0.89
PPP4R1-215ENST00000580182 SKIP12755 728 aa20.63■□□□□ 0.89
PPP4R1-215ENST00000580182 LIG1P18858 919 aa20.63■□□□□ 0.89
PPP4R1-215ENST00000580182 AXLP30530 894 aa20.63■□□□□ 0.89
PPP4R1-215ENST00000580182 RAB27AP51159 221 aa20.63■□□□□ 0.89
PPP4R1-215ENST00000580182 CACNB1Q02641 598 aaPredicted RBP20.63■□□□□ 0.89
PPP4R1-215ENST00000580182 DHX8Q14562 1220 aaKnown RBP20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms