RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 STAMQ92783 540 aa18.39■□□□□ 0.53
CHMP4A-203ENST00000527154 ZNF707Q96C28 371 aaPredicted RBP18.39■□□□□ 0.53
CHMP4A-203ENST00000527154 FBXO4Q9UKT5 387 aa18.39■□□□□ 0.53
CHMP4A-203ENST00000527154 CA14Q9ULX7 337 aa18.39■□□□□ 0.53
CHMP4A-203ENST00000527154 CNTNAP5Q8WYK1 1306 aa18.39■□□□□ 0.53
CHMP4A-203ENST00000527154 MYH9P35579 1960 aaKnown RBP18.39■□□□□ 0.53
CHMP4A-203ENST00000527154 MEIS3P2A8K0S8 358 aa18.38■□□□□ 0.53
CHMP4A-203ENST00000527154 hCG_1984214I3L0E3 225 aa18.38■□□□□ 0.53
CHMP4A-203ENST00000527154 PRC1O43663 620 aa18.38■□□□□ 0.53
CHMP4A-203ENST00000527154 KINO60870 393 aaKnown RBP18.38■□□□□ 0.53
CHMP4A-203ENST00000527154 SKIP12755 728 aa18.38■□□□□ 0.53
CHMP4A-203ENST00000527154 FGFR4P22455 802 aa18.38■□□□□ 0.53
CHMP4A-203ENST00000527154 KLRC2P26717 231 aa18.38■□□□□ 0.53
CHMP4A-203ENST00000527154 HTR4Q13639 388 aa18.38■□□□□ 0.53
CHMP4A-203ENST00000527154 TARBP2Q15633 366 aaKnown RBP18.38■□□□□ 0.53
CHMP4A-203ENST00000527154 GLB1LQ6UWU2 654 aa18.38■□□□□ 0.53
CHMP4A-203ENST00000527154 SGMS1Q86VZ5 419 aa18.38■□□□□ 0.53
CHMP4A-203ENST00000527154 CKAP2LQ8IYA6 745 aa18.38■□□□□ 0.53
CHMP4A-203ENST00000527154 ZNF713Q8N859 430 aaPredicted RBP18.38■□□□□ 0.53
CHMP4A-203ENST00000527154 HDAC7Q8WUI4 952 aa18.38■□□□□ 0.53
CHMP4A-203ENST00000527154 CEP89Q96ST8 783 aa18.38■□□□□ 0.53
CHMP4A-203ENST00000527154 MAN1C1Q9NR34 630 aa18.38■□□□□ 0.53
CHMP4A-203ENST00000527154 CHD8Q9HCK8 2581 aa18.37■□□□□ 0.53
CHMP4A-203ENST00000527154 IGKV6-21A0A0C4DH24 114 aa18.37■□□□□ 0.53
CHMP4A-203ENST00000527154 SGSM2O43147 1006 aa18.37■□□□□ 0.53
CHMP4A-203ENST00000527154 PSAPP07602 524 aa18.37■□□□□ 0.53
CHMP4A-203ENST00000527154 LAMP2P13473 410 aa18.37■□□□□ 0.53
CHMP4A-203ENST00000527154 VARS2Q5ST30 1063 aaKnown RBP18.37■□□□□ 0.53
CHMP4A-203ENST00000527154 ZNF280BQ86YH2 543 aa18.37■□□□□ 0.53
CHMP4A-203ENST00000527154 ZBTB44Q8NCP5 570 aa18.37■□□□□ 0.53
CHMP4A-203ENST00000527154 LPPQ93052 612 aa18.37■□□□□ 0.53
CHMP4A-203ENST00000527154 HINFPQ9BQA5 517 aa18.37■□□□□ 0.53
CHMP4A-203ENST00000527154 GLT8D2Q9H1C3 349 aa18.37■□□□□ 0.53
CHMP4A-203ENST00000527154 RXFP1Q9HBX9 757 aa18.37■□□□□ 0.53
CHMP4A-203ENST00000527154 GABBR1Q9UBS5 961 aa18.37■□□□□ 0.53
CHMP4A-203ENST00000527154 PCDHGA2Q9Y5H1 932 aa18.37■□□□□ 0.53
CHMP4A-203ENST00000527154 CCDC195A0A1B0GUA6 201 aa18.36■□□□□ 0.53
CHMP4A-203ENST00000527154 CCDC69A6NI79 296 aa18.36■□□□□ 0.53
CHMP4A-203ENST00000527154 PRR5-ARHGAP8B1AHC4 643 aa18.36■□□□□ 0.53
CHMP4A-203ENST00000527154 STK25O00506 426 aa18.36■□□□□ 0.53
CHMP4A-203ENST00000527154 LILRB5O75023 590 aa18.36■□□□□ 0.53
CHMP4A-203ENST00000527154 IGHDP01880 384 aa18.36■□□□□ 0.53
CHMP4A-203ENST00000527154 SOD2P04179 222 aa18.36■□□□□ 0.53
CHMP4A-203ENST00000527154 CHMLP26374 656 aa18.36■□□□□ 0.53
CHMP4A-203ENST00000527154 GBP2P32456 591 aaPredicted RBP18.36■□□□□ 0.53
CHMP4A-203ENST00000527154 ADCY7P51828 1080 aa18.36■□□□□ 0.53
CHMP4A-203ENST00000527154 NAPAP54920 295 aa18.36■□□□□ 0.53
CHMP4A-203ENST00000527154 ARHGAP8P85298 464 aa18.36■□□□□ 0.53
CHMP4A-203ENST00000527154 CDC42EP1Q00587 391 aa18.36■□□□□ 0.53
CHMP4A-203ENST00000527154 SETQ01105 290 aaPredicted RBP18.36■□□□□ 0.53
CHMP4A-203ENST00000527154 SPECC1Q5M775 1068 aa18.36■□□□□ 0.53
CHMP4A-203ENST00000527154 KIAA0319Q5VV43 1072 aa18.36■□□□□ 0.53
CHMP4A-203ENST00000527154 DCLRE1AQ6PJP8 1040 aa18.36■□□□□ 0.53
CHMP4A-203ENST00000527154 CASC1Q6TDU7 716 aa18.36■□□□□ 0.53
CHMP4A-203ENST00000527154 ZNF668Q96K58 619 aaPredicted RBP18.36■□□□□ 0.53
CHMP4A-203ENST00000527154 RPS6KC1Q96S38 1066 aa18.36■□□□□ 0.53
CHMP4A-203ENST00000527154 TMEM175Q9BSA9 504 aa18.36■□□□□ 0.53
CHMP4A-203ENST00000527154 FAM105AQ9NUU6 356 aa18.36■□□□□ 0.53
CHMP4A-203ENST00000527154 BARHL2Q9NY43 387 aa18.36■□□□□ 0.53
CHMP4A-203ENST00000527154 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.36■□□□□ 0.53
CHMP4A-203ENST00000527154 INPPL1O15357 1258 aa18.35■□□□□ 0.53
CHMP4A-203ENST00000527154 TEX28O15482 410 aa18.35■□□□□ 0.53
CHMP4A-203ENST00000527154 CSDE1O75534 798 aaKnown RBP18.35■□□□□ 0.53
CHMP4A-203ENST00000527154 DDHD2O94830 711 aa18.35■□□□□ 0.53
CHMP4A-203ENST00000527154 OATP04181 439 aa18.35■□□□□ 0.53
CHMP4A-203ENST00000527154 ADRB1P08588 477 aa18.35■□□□□ 0.53
CHMP4A-203ENST00000527154 MCM5P33992 734 aa18.35■□□□□ 0.53
CHMP4A-203ENST00000527154 RAB27AP51159 221 aa18.35■□□□□ 0.53
CHMP4A-203ENST00000527154 DRP2Q13474 957 aa18.35■□□□□ 0.53
CHMP4A-203ENST00000527154 MRPL10Q7Z7H8 261 aaKnown RBP18.35■□□□□ 0.53
CHMP4A-203ENST00000527154 CCDC82Q8N4S0 544 aa18.35■□□□□ 0.53
CHMP4A-203ENST00000527154 RUFY2Q8WXA3 655 aa18.35■□□□□ 0.53
CHMP4A-203ENST00000527154 LENG9Q96B70 501 aa18.35■□□□□ 0.53
CHMP4A-203ENST00000527154 ZNF577Q9BSK1 485 aa18.35■□□□□ 0.53
CHMP4A-203ENST00000527154 OSBPL6Q9BZF3 934 aa18.35■□□□□ 0.53
CHMP4A-203ENST00000527154 EPC1Q9H2F5 836 aa18.35■□□□□ 0.53
CHMP4A-203ENST00000527154 RWDD1Q9H446 243 aaPredicted RBP18.35■□□□□ 0.53
CHMP4A-203ENST00000527154 MRPL17Q9NRX2 175 aaKnown RBP18.35■□□□□ 0.53
CHMP4A-203ENST00000527154 MARCH5Q9NX47 278 aa18.35■□□□□ 0.53
CHMP4A-203ENST00000527154 DPP7Q9UHL4 492 aa18.35■□□□□ 0.53
CHMP4A-203ENST00000527154 WDR81Q562E7 1941 aa18.35■□□□□ 0.53
CHMP4A-203ENST00000527154 CACNA1GO43497 2377 aa18.34■□□□□ 0.53
CHMP4A-203ENST00000527154 RFPL2O75678 378 aa18.34■□□□□ 0.53
CHMP4A-203ENST00000527154 CIITAP33076 1130 aa18.34■□□□□ 0.53
CHMP4A-203ENST00000527154 AFF1P51825 1210 aaKnown RBP18.34■□□□□ 0.53
CHMP4A-203ENST00000527154 LMNB2Q03252 620 aa18.34■□□□□ 0.53
CHMP4A-203ENST00000527154 AGMOQ6ZNB7 445 aa18.34■□□□□ 0.53
CHMP4A-203ENST00000527154 RTKNQ9BST9 563 aa18.34■□□□□ 0.53
CHMP4A-203ENST00000527154 HERC2P3Q9BVR0 1158 aa18.34■□□□□ 0.53
CHMP4A-203ENST00000527154 GCOM2Q9BZD3 368 aaPredicted RBP18.34■□□□□ 0.53
CHMP4A-203ENST00000527154 FOXQ1Q9C009 403 aa18.34■□□□□ 0.53
CHMP4A-203ENST00000527154 SLC12A7Q9Y666 1083 aa18.34■□□□□ 0.53
CHMP4A-203ENST00000527154 PATJQ8NI35 1801 aa18.34■□□□□ 0.53
CHMP4A-203ENST00000527154 SMCO2A6NFE2 343 aa18.33■□□□□ 0.52
CHMP4A-203ENST00000527154 LRRN2O75325 713 aa18.33■□□□□ 0.52
CHMP4A-203ENST00000527154 ADH1AP07327 375 aa18.33■□□□□ 0.52
CHMP4A-203ENST00000527154 RFX1P22670 979 aa18.33■□□□□ 0.52
CHMP4A-203ENST00000527154 SFPQP23246 707 aaKnown RBP eCLIP18.33■□□□□ 0.52
CHMP4A-203ENST00000527154 ZNF76P36508 570 aa18.33■□□□□ 0.52
CHMP4A-203ENST00000527154 PRKCEQ02156 737 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms