RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 HS1BP3Q53T59 392 aa5.67□□□□□ -1.5
HMGB3P13-201ENST00000511263 HSP90AB3PQ58FF7 597 aa5.67□□□□□ -1.5
HMGB3P13-201ENST00000511263 CCDC178Q5BJE1 867 aa5.67□□□□□ -1.5
HMGB3P13-201ENST00000511263 KIAA1841Q6NSI8 718 aa5.67□□□□□ -1.5
HMGB3P13-201ENST00000511263 TMED8Q6PL24 325 aaPredicted RBP5.67□□□□□ -1.5
HMGB3P13-201ENST00000511263 CASC1Q6TDU7 716 aa5.67□□□□□ -1.5
HMGB3P13-201ENST00000511263 CIR1Q86X95 450 aaPredicted RBP5.67□□□□□ -1.5
HMGB3P13-201ENST00000511263 GEMIN8Q9NWZ8 242 aaKnown RBP5.67□□□□□ -1.5
HMGB3P13-201ENST00000511263 MSRAQ9UJ68 235 aa5.67□□□□□ -1.5
HMGB3P13-201ENST00000511263 FAM184BQ9ULE4 1060 aa5.67□□□□□ -1.5
HMGB3P13-201ENST00000511263 NR2E1Q9Y466 385 aa5.67□□□□□ -1.5
HMGB3P13-201ENST00000511263 MAP3K1Q13233 1512 aa5.67□□□□□ -1.5
HMGB3P13-201ENST00000511263 EFCAB5A4FU69 1503 aa5.66□□□□□ -1.5
HMGB3P13-201ENST00000511263 FAM83GA6ND36 823 aa5.66□□□□□ -1.5
HMGB3P13-201ENST00000511263 TCERG1O14776 1098 aaKnown RBP5.66□□□□□ -1.5
HMGB3P13-201ENST00000511263 MATN3O15232 486 aa5.66□□□□□ -1.5
HMGB3P13-201ENST00000511263 VIL1P09327 827 aaKnown RBP5.66□□□□□ -1.5
HMGB3P13-201ENST00000511263 BPIP17213 487 aa5.66□□□□□ -1.5
HMGB3P13-201ENST00000511263 ADCYAP1R1P41586 468 aa5.66□□□□□ -1.5
HMGB3P13-201ENST00000511263 GPR15P49685 360 aa5.66□□□□□ -1.5
HMGB3P13-201ENST00000511263 NRG3P56975 720 aa5.66□□□□□ -1.5
HMGB3P13-201ENST00000511263 ZXDAP98168 799 aa5.66□□□□□ -1.5
HMGB3P13-201ENST00000511263 STRN3Q13033 797 aa5.66□□□□□ -1.5
HMGB3P13-201ENST00000511263 TBC1D10BQ4KMP7 808 aaPredicted RBP5.66□□□□□ -1.5
HMGB3P13-201ENST00000511263 AGBL4Q5VU57 503 aa5.66□□□□□ -1.5
HMGB3P13-201ENST00000511263 TRIM68Q6AZZ1 485 aa5.66□□□□□ -1.5
HMGB3P13-201ENST00000511263 RASSF3Q86WH2 238 aa5.66□□□□□ -1.5
HMGB3P13-201ENST00000511263 TTC9BQ8N6N2 239 aa5.66□□□□□ -1.5
HMGB3P13-201ENST00000511263 CHST13Q8NET6 341 aa5.66□□□□□ -1.5
HMGB3P13-201ENST00000511263 SLC5A5Q92911 643 aa5.66□□□□□ -1.5
HMGB3P13-201ENST00000511263 GCDHQ92947 438 aaPredicted RBP5.66□□□□□ -1.5
HMGB3P13-201ENST00000511263 DYDC2Q96IM9 177 aa5.66□□□□□ -1.5
HMGB3P13-201ENST00000511263 PAWRQ96IZ0 340 aaKnown RBP5.66□□□□□ -1.5
HMGB3P13-201ENST00000511263 LMF1Q96S06 567 aa5.66□□□□□ -1.5
HMGB3P13-201ENST00000511263 KRTAP3-1Q9BYR8 98 aa5.66□□□□□ -1.5
HMGB3P13-201ENST00000511263 EMC7Q9NPA0 242 aa5.66□□□□□ -1.5
HMGB3P13-201ENST00000511263 POLR3BQ9NW08 1133 aaPredicted RBP5.66□□□□□ -1.5
HMGB3P13-201ENST00000511263 CDC42EP3Q9UKI2 254 aa5.66□□□□□ -1.5
HMGB3P13-201ENST00000511263 DENND2AQ9ULE3 1009 aa5.66□□□□□ -1.5
HMGB3P13-201ENST00000511263 SBNO2Q9Y2G9 1366 aa5.66□□□□□ -1.5
HMGB3P13-201ENST00000511263 CASKIN1Q8WXD9 1431 aa5.65□□□□□ -1.5
HMGB3P13-201ENST00000511263 ARHGAP35Q9NRY4 1499 aa5.65□□□□□ -1.5
HMGB3P13-201ENST00000511263 EIF4G3O43432 1585 aaKnown RBP5.65□□□□□ -1.5
HMGB3P13-201ENST00000511263 PMS2P1A4D2B8 440 aa5.65□□□□□ -1.5
HMGB3P13-201ENST00000511263 ARHGAP6O43182 974 aa5.65□□□□□ -1.5
HMGB3P13-201ENST00000511263 FSBPO95073 299 aa5.65□□□□□ -1.5
HMGB3P13-201ENST00000511263 ITGB3P05106 788 aa5.65□□□□□ -1.5
HMGB3P13-201ENST00000511263 RPS19P39019 145 aaKnown RBP5.65□□□□□ -1.5
HMGB3P13-201ENST00000511263 SSR1P43307 286 aaKnown RBP5.65□□□□□ -1.5
HMGB3P13-201ENST00000511263 MRE11P49959 708 aa5.65□□□□□ -1.5
HMGB3P13-201ENST00000511263 RRADP55042 308 aa5.65□□□□□ -1.5
HMGB3P13-201ENST00000511263 NFYCQ13952 458 aa5.65□□□□□ -1.5
HMGB3P13-201ENST00000511263 TERF2Q15554 542 aa5.65□□□□□ -1.5
HMGB3P13-201ENST00000511263 RNF219Q5W0B1 726 aaPredicted RBP5.65□□□□□ -1.5
HMGB3P13-201ENST00000511263 CREB3L3Q68CJ9 461 aa5.65□□□□□ -1.5
HMGB3P13-201ENST00000511263 IQSEC1Q6DN90 963 aa5.65□□□□□ -1.5
HMGB3P13-201ENST00000511263 ESRP1Q6NXG1 681 aaKnown RBP5.65□□□□□ -1.5
HMGB3P13-201ENST00000511263 GPR155Q7Z3F1 870 aa5.65□□□□□ -1.5
HMGB3P13-201ENST00000511263 FILIP1Q7Z7B0 1213 aa5.65□□□□□ -1.5
HMGB3P13-201ENST00000511263 GIMAP8Q8ND71 665 aaPredicted RBP5.65□□□□□ -1.5
HMGB3P13-201ENST00000511263 OR5AN1Q8NGI8 311 aa5.65□□□□□ -1.5
HMGB3P13-201ENST00000511263 ZCRB1Q8TBF4 217 aaKnown RBP5.65□□□□□ -1.5
HMGB3P13-201ENST00000511263 RTF1Q92541 710 aaKnown RBP5.65□□□□□ -1.5
HMGB3P13-201ENST00000511263 WDR92Q96MX6 357 aa5.65□□□□□ -1.5
HMGB3P13-201ENST00000511263 SAMD11Q96NU1 681 aa5.65□□□□□ -1.5
HMGB3P13-201ENST00000511263 ACAP3Q96P50 834 aa5.65□□□□□ -1.5
HMGB3P13-201ENST00000511263 RBM15Q96T37 977 aaKnown RBP eCLIP5.65□□□□□ -1.5
HMGB3P13-201ENST00000511263 NELFAQ9H3P2 528 aa5.65□□□□□ -1.5
HMGB3P13-201ENST00000511263 SEMA4AQ9H3S1 761 aa5.65□□□□□ -1.5
HMGB3P13-201ENST00000511263 ZMAT4Q9H898 229 aa5.65□□□□□ -1.5
HMGB3P13-201ENST00000511263 SPTLC3Q9NUV7 552 aa5.65□□□□□ -1.5
HMGB3P13-201ENST00000511263 SMPD4Q9NXE4 827 aa5.65□□□□□ -1.5
HMGB3P13-201ENST00000511263 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.65□□□□□ -1.5
HMGB3P13-201ENST00000511263 NOLC1Q14978 699 aaKnown RBP eCLIP5.64□□□□□ -1.51
HMGB3P13-201ENST00000511263 PCOLCEQ15113 449 aa5.64□□□□□ -1.51
HMGB3P13-201ENST00000511263 HSP90AB4PQ58FF6 505 aa5.64□□□□□ -1.51
HMGB3P13-201ENST00000511263 GJC2Q5T442 439 aaPredicted RBP5.64□□□□□ -1.51
HMGB3P13-201ENST00000511263 FAM43BQ6ZT52 329 aaPredicted RBP5.64□□□□□ -1.51
HMGB3P13-201ENST00000511263 KANSL1Q7Z3B3 1105 aa5.64□□□□□ -1.51
HMGB3P13-201ENST00000511263 CDYL2Q8N8U2 506 aa5.64□□□□□ -1.51
HMGB3P13-201ENST00000511263 ATL2Q8NHH9 583 aa5.64□□□□□ -1.51
HMGB3P13-201ENST00000511263 SLC7A6OSQ96CW6 309 aaPredicted RBP5.64□□□□□ -1.51
HMGB3P13-201ENST00000511263 CDK5RAP1Q96SZ6 601 aaKnown RBP5.64□□□□□ -1.51
HMGB3P13-201ENST00000511263 NOL10Q9BSC4 688 aaKnown RBP5.64□□□□□ -1.51
HMGB3P13-201ENST00000511263 MYL10Q9BUA6 226 aa5.64□□□□□ -1.51
HMGB3P13-201ENST00000511263 KRTAP9-8Q9BYQ0 159 aa5.64□□□□□ -1.51
HMGB3P13-201ENST00000511263 OSBPL6Q9BZF3 934 aa5.64□□□□□ -1.51
HMGB3P13-201ENST00000511263 C12orf65Q9H3J6 166 aaKnown RBP5.64□□□□□ -1.51
HMGB3P13-201ENST00000511263 POFUT1Q9H488 388 aa5.64□□□□□ -1.51
HMGB3P13-201ENST00000511263 PRDM16Q9HAZ2 1276 aa5.64□□□□□ -1.51
HMGB3P13-201ENST00000511263 RBM28Q9NW13 759 aaKnown RBP5.64□□□□□ -1.51
HMGB3P13-201ENST00000511263 H2AFY2Q9P0M6 372 aaPredicted RBP5.64□□□□□ -1.51
HMGB3P13-201ENST00000511263 ADAMTS12P58397 1594 aa5.63□□□□□ -1.51
HMGB3P13-201ENST00000511263 A0A0A6YYJ9 748 aa5.63□□□□□ -1.51
HMGB3P13-201ENST00000511263 ANKRD62A6NC57 917 aa5.63□□□□□ -1.51
HMGB3P13-201ENST00000511263 KDM1AO60341 852 aa5.63□□□□□ -1.51
HMGB3P13-201ENST00000511263 ZNF888P0CJ79 500 aaPredicted RBP5.63□□□□□ -1.51
HMGB3P13-201ENST00000511263 CR2P20023 1033 aa5.63□□□□□ -1.51
HMGB3P13-201ENST00000511263 CALRP27797 417 aaKnown RBP5.63□□□□□ -1.51
HMGB3P13-201ENST00000511263 BROXQ5VW32 411 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms