RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 FAM178BQ8IXR5 827 aa12.57□□□□□ -0.4
NUP50-216ENST00000486184 SLC17A8Q8NDX2 589 aa12.57□□□□□ -0.4
NUP50-216ENST00000486184 TET1Q8NFU7 2136 aa12.57□□□□□ -0.4
NUP50-216ENST00000486184 PAGE5Q96GU1 130 aa12.57□□□□□ -0.4
NUP50-216ENST00000486184 C7orf25Q9BPX7 421 aa12.57□□□□□ -0.4
NUP50-216ENST00000486184 TRIM9Q9C026 710 aa12.57□□□□□ -0.4
NUP50-216ENST00000486184 UBE2OQ9C0C9 1292 aaKnown RBP12.57□□□□□ -0.4
NUP50-216ENST00000486184 BLZF1Q9H2G9 400 aa12.57□□□□□ -0.4
NUP50-216ENST00000486184 MTIF3Q9H2K0 278 aaKnown RBP12.57□□□□□ -0.4
NUP50-216ENST00000486184 CDHR5Q9HBB8 845 aa12.57□□□□□ -0.4
NUP50-216ENST00000486184 PANK4Q9NVE7 773 aa12.57□□□□□ -0.4
NUP50-216ENST00000486184 NOC2LQ9Y3T9 749 aaKnown RBP12.57□□□□□ -0.4
NUP50-216ENST00000486184 K7ENM7 598 aa12.56□□□□□ -0.4
NUP50-216ENST00000486184 GTPBP6O43824 516 aaPredicted RBP12.56□□□□□ -0.4
NUP50-216ENST00000486184 TRAK2O60296 914 aa12.56□□□□□ -0.4
NUP50-216ENST00000486184 NR1I2O75469 434 aa12.56□□□□□ -0.4
NUP50-216ENST00000486184 FGBP02675 491 aa12.56□□□□□ -0.4
NUP50-216ENST00000486184 CXCL10P02778 98 aa12.56□□□□□ -0.4
NUP50-216ENST00000486184 ACRP10323 421 aa12.56□□□□□ -0.4
NUP50-216ENST00000486184 ZSCAN20P17040 1043 aaPredicted RBP12.56□□□□□ -0.4
NUP50-216ENST00000486184 ABCD1P33897 745 aa12.56□□□□□ -0.4
NUP50-216ENST00000486184 NPTX2P47972 431 aa12.56□□□□□ -0.4
NUP50-216ENST00000486184 PTENP60484 403 aa12.56□□□□□ -0.4
NUP50-216ENST00000486184 STRN3Q13033 797 aa12.56□□□□□ -0.4
NUP50-216ENST00000486184 IKBKEQ14164 716 aa12.56□□□□□ -0.4
NUP50-216ENST00000486184 MBTPS1Q14703 1052 aa12.56□□□□□ -0.4
NUP50-216ENST00000486184 PCBP1Q15365 356 aaKnown RBP eCLIP12.56□□□□□ -0.4
NUP50-216ENST00000486184 HERC4Q5GLZ8 1057 aaPredicted RBP12.56□□□□□ -0.4
NUP50-216ENST00000486184 GRAMD1CQ8IYS0 662 aa12.56□□□□□ -0.4
NUP50-216ENST00000486184 DAW1Q8N136 415 aa12.56□□□□□ -0.4
NUP50-216ENST00000486184 ENGASEQ8NFI3 743 aa12.56□□□□□ -0.4
NUP50-216ENST00000486184 TMEM40Q8WWA1 233 aa12.56□□□□□ -0.4
NUP50-216ENST00000486184 BSNDQ8WZ55 320 aa12.56□□□□□ -0.4
NUP50-216ENST00000486184 TIGD1Q96MW7 591 aa12.56□□□□□ -0.4
NUP50-216ENST00000486184 FTHL17Q9BXU8 183 aa12.56□□□□□ -0.4
NUP50-216ENST00000486184 NFKBIZQ9BYH8 718 aa12.56□□□□□ -0.4
NUP50-216ENST00000486184 MRPL44Q9H9J2 332 aaKnown RBP12.56□□□□□ -0.4
NUP50-216ENST00000486184 IFT122Q9HBG6 1241 aa12.56□□□□□ -0.4
NUP50-216ENST00000486184 PRMT7Q9NVM4 692 aaPredicted RBP12.56□□□□□ -0.4
NUP50-216ENST00000486184 DACT1Q9NYF0 836 aa12.56□□□□□ -0.4
NUP50-216ENST00000486184 PCDH10Q9P2E7 1040 aa12.56□□□□□ -0.4
NUP50-216ENST00000486184 SEL1LQ9UBV2 794 aa12.56□□□□□ -0.4
NUP50-216ENST00000486184 PADI3Q9ULW8 664 aa12.56□□□□□ -0.4
NUP50-216ENST00000486184 DENND3A2RUS2 1198 aa12.55□□□□□ -0.4
NUP50-216ENST00000486184 ZBBXA8MT70 800 aa12.55□□□□□ -0.4
NUP50-216ENST00000486184 K7ERI5 159 aa12.55□□□□□ -0.4
NUP50-216ENST00000486184 SLC16A4O15374 487 aa12.55□□□□□ -0.4
NUP50-216ENST00000486184 EFCAB14O75071 495 aa12.55□□□□□ -0.4
NUP50-216ENST00000486184 CSDE1O75534 798 aaKnown RBP12.55□□□□□ -0.4
NUP50-216ENST00000486184 PTMSP20962 102 aa12.55□□□□□ -0.4
NUP50-216ENST00000486184 SCP2P22307 547 aa12.55□□□□□ -0.4
NUP50-216ENST00000486184 FGFR4P22455 802 aa12.55□□□□□ -0.4
NUP50-216ENST00000486184 KCNJ6P48051 423 aa12.55□□□□□ -0.4
NUP50-216ENST00000486184 ZNF131P52739 623 aa12.55□□□□□ -0.4
NUP50-216ENST00000486184 SNW1Q13573 536 aaKnown RBP12.55□□□□□ -0.4
NUP50-216ENST00000486184 CUL4BQ13620 913 aa12.55□□□□□ -0.4
NUP50-216ENST00000486184 POSTNQ15063 836 aa12.55□□□□□ -0.4
NUP50-216ENST00000486184 MAPK6Q16659 721 aa12.55□□□□□ -0.4
NUP50-216ENST00000486184 PLEKHG4Q58EX7 1191 aa12.55□□□□□ -0.4
NUP50-216ENST00000486184 CDCA2Q69YH5 1023 aaPredicted RBP12.55□□□□□ -0.4
NUP50-216ENST00000486184 FAM43BQ6ZT52 329 aaPredicted RBP12.55□□□□□ -0.4
NUP50-216ENST00000486184 STXBP4Q6ZWJ1 553 aa12.55□□□□□ -0.4
NUP50-216ENST00000486184 UNC13DQ70J99 1090 aa12.55□□□□□ -0.4
NUP50-216ENST00000486184 FAM228AQ86W67 206 aa12.55□□□□□ -0.4
NUP50-216ENST00000486184 SFR1Q86XK3 245 aa12.55□□□□□ -0.4
NUP50-216ENST00000486184 DBF4BQ8NFT6 615 aa12.55□□□□□ -0.4
NUP50-216ENST00000486184 SPIRE2Q8WWL2 714 aa12.55□□□□□ -0.4
NUP50-216ENST00000486184 DNAJC19Q96DA6 116 aa12.55□□□□□ -0.4
NUP50-216ENST00000486184 KIFC3Q9BVG8 833 aa12.55□□□□□ -0.4
NUP50-216ENST00000486184 LMBRD1Q9NUN5 540 aa12.55□□□□□ -0.4
NUP50-216ENST00000486184 EXOC1Q9NV70 894 aa12.55□□□□□ -0.4
NUP50-216ENST00000486184 ST3GAL5Q9UNP4 418 aa12.55□□□□□ -0.4
NUP50-216ENST00000486184 CEP290O15078 2479 aa12.55□□□□□ -0.4
NUP50-216ENST00000486184 PVALEFA0A1B0GWK0 134 aa12.54□□□□□ -0.4
NUP50-216ENST00000486184 BAIAP3O94812 1187 aa12.54□□□□□ -0.4
NUP50-216ENST00000486184 SMC2O95347 1197 aa12.54□□□□□ -0.4
NUP50-216ENST00000486184 MBD3O95983 291 aa12.54□□□□□ -0.4
NUP50-216ENST00000486184 PRKCBP05771 671 aa12.54□□□□□ -0.4
NUP50-216ENST00000486184 CASP1P29466 404 aa12.54□□□□□ -0.4
NUP50-216ENST00000486184 NUBP1P53384 320 aa12.54□□□□□ -0.4
NUP50-216ENST00000486184 NCKAP1LP55160 1127 aa12.54□□□□□ -0.4
NUP50-216ENST00000486184 MBTD1Q05BQ5 628 aa12.54□□□□□ -0.4
NUP50-216ENST00000486184 COASYQ13057 564 aa12.54□□□□□ -0.4
NUP50-216ENST00000486184 CNNM4Q6P4Q7 775 aa12.54□□□□□ -0.4
NUP50-216ENST00000486184 ZNF365Q70YC5 407 aa12.54□□□□□ -0.4
NUP50-216ENST00000486184 OTOP2Q7RTS6 562 aa12.54□□□□□ -0.4
NUP50-216ENST00000486184 HAUS6Q7Z4H7 955 aa12.54□□□□□ -0.4
NUP50-216ENST00000486184 BICD1Q96G01 975 aa12.54□□□□□ -0.4
NUP50-216ENST00000486184 PRIMPOLQ96LW4 560 aa12.54□□□□□ -0.4
NUP50-216ENST00000486184 AGO3Q9H9G7 860 aaKnown RBP12.54□□□□□ -0.4
NUP50-216ENST00000486184 ERVK-5Q9HDB9 667 aa12.54□□□□□ -0.4
NUP50-216ENST00000486184 TBC1D7Q9P0N9 293 aa12.54□□□□□ -0.4
NUP50-216ENST00000486184 PIN4Q9Y237 131 aaKnown RBP12.54□□□□□ -0.4
NUP50-216ENST00000486184 TNRC18O15417 2968 aaPredicted RBP12.54□□□□□ -0.4
NUP50-216ENST00000486184 ABHD14A-ACY1A0A1B0GW23 586 aa12.53□□□□□ -0.4
NUP50-216ENST00000486184 FRMD3A2A2Y4 597 aa12.53□□□□□ -0.4
NUP50-216ENST00000486184 GCNT3O95395 438 aa12.53□□□□□ -0.4
NUP50-216ENST00000486184 AMHP03971 560 aa12.53□□□□□ -0.4
NUP50-216ENST00000486184 RPN1P04843 607 aaKnown RBP12.53□□□□□ -0.4
NUP50-216ENST00000486184 MAPTP10636 758 aaKnown RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms