RNA–Protein interactions for RNA: ENST00000485402.5

TTC3-219, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,626 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-219ENST00000485402 NR2E1Q9Y466 385 aa16.08■□□□□ 0.16
TTC3-219ENST00000485402 PCDHB13Q9Y5F0 798 aa16.08■□□□□ 0.16
TTC3-219ENST00000485402 POTEB3A0JP26 581 aa16.08■□□□□ 0.16
TTC3-219ENST00000485402 POTECB2RU33 542 aa16.08■□□□□ 0.16
TTC3-219ENST00000485402 BUB1BO60566 1050 aaPredicted RBP16.08■□□□□ 0.16
TTC3-219ENST00000485402 ALAS1P13196 640 aa16.08■□□□□ 0.16
TTC3-219ENST00000485402 VGLL4Q14135 290 aa16.08■□□□□ 0.16
TTC3-219ENST00000485402 POTEBQ6S5H4 581 aa16.08■□□□□ 0.16
TTC3-219ENST00000485402 GLG1Q92896 1179 aa16.08■□□□□ 0.16
TTC3-219ENST00000485402 RANBP17Q9H2T7 1088 aaKnown RBP16.08■□□□□ 0.16
TTC3-219ENST00000485402 CLIC2O15247 247 aa16.07■□□□□ 0.16
TTC3-219ENST00000485402 EDIL3O43854 480 aa16.07■□□□□ 0.16
TTC3-219ENST00000485402 CAND2O75155 1236 aa16.07■□□□□ 0.16
TTC3-219ENST00000485402 KRT13P13646 458 aa16.07■□□□□ 0.16
TTC3-219ENST00000485402 STAT3P40763 770 aa16.07■□□□□ 0.16
TTC3-219ENST00000485402 USP11P51784 963 aa16.07■□□□□ 0.16
TTC3-219ENST00000485402 CUL1Q13616 776 aa16.07■□□□□ 0.16
TTC3-219ENST00000485402 YTHDF3Q7Z739 585 aaKnown RBP16.07■□□□□ 0.16
TTC3-219ENST00000485402 TBC1D1Q86TI0 1168 aaPredicted RBP16.07■□□□□ 0.16
TTC3-219ENST00000485402 CCDC65Q8IXS2 484 aa16.07■□□□□ 0.16
TTC3-219ENST00000485402 CCDC26Q8TAB7 109 aa16.07■□□□□ 0.16
TTC3-219ENST00000485402 CSADQ9Y600 493 aa16.07■□□□□ 0.16
TTC3-219ENST00000485402 GFPT2O94808 682 aa16.07■□□□□ 0.16
TTC3-219ENST00000485402 ECHS1P30084 290 aa16.07■□□□□ 0.16
TTC3-219ENST00000485402 MGARPQ8TDB4 240 aa16.07■□□□□ 0.16
TTC3-219ENST00000485402 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.07■□□□□ 0.163e-8■■□□□ 11.5
TTC3-219ENST00000485402 SLC12A6Q9UHW9 1150 aa16.07■□□□□ 0.16
TTC3-219ENST00000485402 CEP83Q9Y592 693 aa16.07■□□□□ 0.16
TTC3-219ENST00000485402 PITPNM2Q9BZ72 1349 aa16.07■□□□□ 0.16
TTC3-219ENST00000485402 ZNF76P36508 570 aa16.07■□□□□ 0.16
TTC3-219ENST00000485402 C6orf89Q6UWU4 347 aa16.07■□□□□ 0.16
TTC3-219ENST00000485402 SGSM3Q96HU1 749 aa16.07■□□□□ 0.16
TTC3-219ENST00000485402 ELAC2Q9BQ52 826 aaKnown RBP16.07■□□□□ 0.16
TTC3-219ENST00000485402 GINM1Q9NU53 330 aa16.07■□□□□ 0.16
TTC3-219ENST00000485402 NAGPAQ9UK23 515 aa16.07■□□□□ 0.16
TTC3-219ENST00000485402 SNX24Q9Y343 169 aa16.07■□□□□ 0.16
TTC3-219ENST00000485402 TMEM110-MUSTN1A8MSY1 372 aa16.06■□□□□ 0.16
TTC3-219ENST00000485402 H2AFZP0C0S5 128 aa16.06■□□□□ 0.16
TTC3-219ENST00000485402 SEMA3FQ13275 785 aa16.06■□□□□ 0.16
TTC3-219ENST00000485402 EXOC3L4Q17RC7 722 aa16.06■□□□□ 0.16
TTC3-219ENST00000485402 H2AFVQ71UI9 128 aa16.06■□□□□ 0.16
TTC3-219ENST00000485402 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.06■□□□□ 0.161e-9■□□□□ 8.5
TTC3-219ENST00000485402 MTMR9Q96QG7 549 aa16.06■□□□□ 0.16
TTC3-219ENST00000485402 OSGEPQ9NPF4 335 aa16.06■□□□□ 0.16
TTC3-219ENST00000485402 ARMCX3Q9UH62 379 aaPredicted RBP16.06■□□□□ 0.16
TTC3-219ENST00000485402 H0YGN5 161 aa16.06■□□□□ 0.16
TTC3-219ENST00000485402 SHBGP04278 402 aa16.06■□□□□ 0.16
TTC3-219ENST00000485402 POTEIP0CG38 1075 aa16.06■□□□□ 0.16
TTC3-219ENST00000485402 POTEJP0CG39 1038 aa16.06■□□□□ 0.16
TTC3-219ENST00000485402 UCHL3P15374 230 aa16.06■□□□□ 0.16
TTC3-219ENST00000485402 CCDC38Q502W7 563 aa16.06■□□□□ 0.16
TTC3-219ENST00000485402 PRR16Q569H4 304 aa16.06■□□□□ 0.16
TTC3-219ENST00000485402 USP50Q70EL3 339 aaPredicted RBP16.06■□□□□ 0.16
TTC3-219ENST00000485402 ATG4CQ96DT6 458 aa16.06■□□□□ 0.16
TTC3-219ENST00000485402 EDEM3Q9BZQ6 932 aa16.06■□□□□ 0.16
TTC3-219ENST00000485402 TMOD4Q9NZQ9 345 aa16.06■□□□□ 0.16
TTC3-219ENST00000485402 MRPL11Q9Y3B7 192 aaKnown RBP16.06■□□□□ 0.16
TTC3-219ENST00000485402 NFS1Q9Y697 457 aa16.06■□□□□ 0.16
TTC3-219ENST00000485402 RBAK-RBAKDNI3L0D1 243 aa16.06■□□□□ 0.16
TTC3-219ENST00000485402 PLA2G4BP0C869 781 aa16.06■□□□□ 0.16
TTC3-219ENST00000485402 ARHGAP4P98171 946 aa16.06■□□□□ 0.16
TTC3-219ENST00000485402 IFI16Q16666 785 aaKnown RBP16.06■□□□□ 0.16
TTC3-219ENST00000485402 CCDC25Q86WR0 208 aa16.06■□□□□ 0.16
TTC3-219ENST00000485402 TRIM59Q8IWR1 403 aa16.06■□□□□ 0.16
TTC3-219ENST00000485402 DNAJC19Q96DA6 116 aa16.06■□□□□ 0.16
TTC3-219ENST00000485402 WNK4Q96J92 1243 aa16.06■□□□□ 0.16
TTC3-219ENST00000485402 PBKQ96KB5 322 aa16.06■□□□□ 0.16
TTC3-219ENST00000485402 WDR18Q9BV38 432 aa16.06■□□□□ 0.16
TTC3-219ENST00000485402 ACTR5Q9H9F9 607 aaPredicted RBP16.06■□□□□ 0.16
TTC3-219ENST00000485402 ELP3Q9H9T3 547 aa16.06■□□□□ 0.16
TTC3-219ENST00000485402 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.06■□□□□ 0.161e-6■■■■■ 50
TTC3-219ENST00000485402 ATAD5Q96QE3 1844 aa16.05■□□□□ 0.16
TTC3-219ENST00000485402 SSC5DA1L4H1 1573 aa16.05■□□□□ 0.16
TTC3-219ENST00000485402 SFI1A8K8P3 1242 aa16.05■□□□□ 0.16
TTC3-219ENST00000485402 SKAP2O75563 359 aaPredicted RBP16.05■□□□□ 0.16
TTC3-219ENST00000485402 POLR2MP0CAP2 368 aa16.05■□□□□ 0.16
TTC3-219ENST00000485402 PABPC4Q13310 644 aaKnown RBP eCLIP16.05■□□□□ 0.16
TTC3-219ENST00000485402 BIRC3Q13489 604 aa16.05■□□□□ 0.16
TTC3-219ENST00000485402 SCFD2Q8WU76 684 aa16.05■□□□□ 0.16
TTC3-219ENST00000485402 SCFD1Q8WVM8 642 aa16.05■□□□□ 0.16
TTC3-219ENST00000485402 THOC1Q96FV9 657 aaKnown RBP16.05■□□□□ 0.16
TTC3-219ENST00000485402 CLMNQ96JQ2 1002 aa16.05■□□□□ 0.16
TTC3-219ENST00000485402 FMO2Q99518 471 aa16.05■□□□□ 0.16
TTC3-219ENST00000485402 TRAF1Q13077 416 aa16.05■□□□□ 0.16
TTC3-219ENST00000485402 TPCN2Q8NHX9 752 aa16.05■□□□□ 0.16
TTC3-219ENST00000485402 CDCA5Q96FF9 252 aa16.05■□□□□ 0.16
TTC3-219ENST00000485402 OTUD5Q96G74 571 aa16.05■□□□□ 0.16
TTC3-219ENST00000485402 L3MBTL3Q96JM7 780 aaPredicted RBP16.05■□□□□ 0.16
TTC3-219ENST00000485402 LRRC27Q9C0I9 530 aa16.05■□□□□ 0.16
TTC3-219ENST00000485402 MLXIPLQ9NP71 852 aa16.05■□□□□ 0.16
TTC3-219ENST00000485402 CHORDC1Q9UHD1 332 aaPredicted RBP16.05■□□□□ 0.16
TTC3-219ENST00000485402 NEBLO76041 1014 aa16.05■□□□□ 0.16
TTC3-219ENST00000485402 CHN1P15882 459 aa16.05■□□□□ 0.16
TTC3-219ENST00000485402 CASP5P51878 434 aa16.05■□□□□ 0.16
TTC3-219ENST00000485402 LRIG3Q6UXM1 1119 aa16.05■□□□□ 0.16
TTC3-219ENST00000485402 VPS36Q86VN1 386 aa16.05■□□□□ 0.16
TTC3-219ENST00000485402 FAM228AQ86W67 206 aa16.05■□□□□ 0.16
TTC3-219ENST00000485402 BCAS3Q9H6U6 928 aa16.05■□□□□ 0.16
TTC3-219ENST00000485402 SLC24A3Q9HC58 644 aa16.05■□□□□ 0.16
TTC3-219ENST00000485402 MMEP08473 750 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms