RNA–Protein interactions for RNA: ENST00000420489.6

CNGA1-203, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene CNGA1, Length 2,746 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-203ENST00000420489 TMCO4Q5TGY1 634 aa4.6□□□□□ -1.67
CNGA1-203ENST00000420489 VN1R2Q8NFZ6 395 aa4.6□□□□□ -1.67
CNGA1-203ENST00000420489 KLHDC7BQ96G42 594 aa4.6□□□□□ -1.67
CNGA1-203ENST00000420489 DNAJC25Q9H1X3 360 aa4.6□□□□□ -1.67
CNGA1-203ENST00000420489 SUPT16HQ9Y5B9 1047 aaKnown RBP4.6□□□□□ -1.67
CNGA1-203ENST00000420489 FRMPD2Q68DX3 1309 aaPredicted RBP4.6□□□□□ -1.67
CNGA1-203ENST00000420489 KIAA1324LA8MWY0 1029 aaPredicted RBP4.6□□□□□ -1.67
CNGA1-203ENST00000420489 HOXB7P09629 217 aa4.6□□□□□ -1.67
CNGA1-203ENST00000420489 CTNNB1P35222 781 aa4.6□□□□□ -1.67
CNGA1-203ENST00000420489 NFIAQ12857 509 aa4.6□□□□□ -1.67
CNGA1-203ENST00000420489 LMAN2Q12907 356 aa4.6□□□□□ -1.67
CNGA1-203ENST00000420489 CLUL1Q15846 466 aa4.6□□□□□ -1.67
CNGA1-203ENST00000420489 PROSER3Q2NL68 480 aa4.6□□□□□ -1.67
CNGA1-203ENST00000420489 EXOSC6Q5RKV6 272 aaKnown RBP4.6□□□□□ -1.67
CNGA1-203ENST00000420489 MFSD14BQ5SR56 506 aa4.6□□□□□ -1.67
CNGA1-203ENST00000420489 LINC01465Q8N7H1 131 aa4.6□□□□□ -1.67
CNGA1-203ENST00000420489 NGRNQ9NPE2 291 aaKnown RBP4.6□□□□□ -1.67
CNGA1-203ENST00000420489 TMEM9BQ9NQ34 198 aa4.6□□□□□ -1.67
CNGA1-203ENST00000420489 PCDHAC2Q9Y5I4 1007 aa4.6□□□□□ -1.67
CNGA1-203ENST00000420489 PARP14Q460N5 1801 aa4.6□□□□□ -1.67
CNGA1-203ENST00000420489 IL16Q14005 1332 aa4.6□□□□□ -1.67
CNGA1-203ENST00000420489 ADGRA3Q8IWK6 1321 aa4.6□□□□□ -1.67
CNGA1-203ENST00000420489 ANHXE9PGG2 379 aa4.59□□□□□ -1.67
CNGA1-203ENST00000420489 GLULP15104 373 aa4.59□□□□□ -1.67
CNGA1-203ENST00000420489 ADSSP30520 456 aa4.59□□□□□ -1.67
CNGA1-203ENST00000420489 OXCT1P55809 520 aa4.59□□□□□ -1.67
CNGA1-203ENST00000420489 KARSQ15046 597 aaKnown RBP4.59□□□□□ -1.67
CNGA1-203ENST00000420489 RPS26P11Q5JNZ5 115 aaPredicted RBP4.59□□□□□ -1.67
CNGA1-203ENST00000420489 TMPRSS7Q7RTY8 843 aa4.59□□□□□ -1.67
CNGA1-203ENST00000420489 ARMC10Q8N2F6 343 aa4.59□□□□□ -1.67
CNGA1-203ENST00000420489 AGGF1Q8N302 714 aaeCLIP4.59□□□□□ -1.67
CNGA1-203ENST00000420489 SPPL3Q8TCT6 385 aa4.59□□□□□ -1.67
CNGA1-203ENST00000420489 ZNF689Q96CS4 500 aaPredicted RBP4.59□□□□□ -1.67
CNGA1-203ENST00000420489 C7orf69Q9H7B7 122 aa4.59□□□□□ -1.67
CNGA1-203ENST00000420489 TLE6Q9H808 572 aa4.59□□□□□ -1.67
CNGA1-203ENST00000420489 SCN5AQ14524 2016 aa4.59□□□□□ -1.67
CNGA1-203ENST00000420489 FAM221AA4D161 298 aa4.59□□□□□ -1.67
CNGA1-203ENST00000420489 EREGO14944 169 aa4.59□□□□□ -1.67
CNGA1-203ENST00000420489 NKRFO15226 690 aaKnown RBP eCLIP4.59□□□□□ -1.67
CNGA1-203ENST00000420489 GRM6O15303 877 aa4.59□□□□□ -1.67
CNGA1-203ENST00000420489 RRP8O43159 456 aaKnown RBP4.59□□□□□ -1.67
CNGA1-203ENST00000420489 ABL1P00519 1130 aa4.59□□□□□ -1.67
CNGA1-203ENST00000420489 HMGCS2P54868 508 aa4.59□□□□□ -1.67
CNGA1-203ENST00000420489 DEFB103AP81534 67 aa4.59□□□□□ -1.67
CNGA1-203ENST00000420489 SPP2Q13103 211 aa4.59□□□□□ -1.67
CNGA1-203ENST00000420489 ATAT1Q5SQI0 421 aa4.59□□□□□ -1.67
CNGA1-203ENST00000420489 IQSEC1Q6DN90 963 aa4.59□□□□□ -1.67
CNGA1-203ENST00000420489 PAOXQ6QHF9 649 aa4.59□□□□□ -1.67
CNGA1-203ENST00000420489 EP400NLQ6ZTU2 488 aa4.59□□□□□ -1.67
CNGA1-203ENST00000420489 LRRC8DQ7L1W4 858 aa4.59□□□□□ -1.67
CNGA1-203ENST00000420489 GLYCTKQ8IVS8 523 aa4.59□□□□□ -1.67
CNGA1-203ENST00000420489 GALNT15Q8N3T1 639 aa4.59□□□□□ -1.67
CNGA1-203ENST00000420489 UBASH3BQ8TF42 649 aa4.59□□□□□ -1.67
CNGA1-203ENST00000420489 HDAC7Q8WUI4 952 aa4.59□□□□□ -1.67
CNGA1-203ENST00000420489 SCLYQ96I15 445 aa4.59□□□□□ -1.67
CNGA1-203ENST00000420489 ZKSCAN3Q9BRR0 538 aa4.59□□□□□ -1.67
CNGA1-203ENST00000420489 MTG1Q9BT17 334 aaPredicted RBP4.59□□□□□ -1.67
CNGA1-203ENST00000420489 MAF1Q9H063 256 aa4.59□□□□□ -1.67
CNGA1-203ENST00000420489 PPP4R2Q9NY27 417 aa4.59□□□□□ -1.67
CNGA1-203ENST00000420489 USP9XQ93008 2570 aaPredicted RBP4.59□□□□□ -1.68
CNGA1-203ENST00000420489 MAN2B1O00754 1011 aa4.59□□□□□ -1.68
CNGA1-203ENST00000420489 CYP11A1P05108 521 aa4.59□□□□□ -1.68
CNGA1-203ENST00000420489 EIF4A1P60842 406 aaKnown RBP4.59□□□□□ -1.68
CNGA1-203ENST00000420489 SLC14A1Q13336 389 aa4.59□□□□□ -1.68
CNGA1-203ENST00000420489 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.59□□□□□ -1.68
CNGA1-203ENST00000420489 KIAA1683Q9H0B3 1180 aa4.59□□□□□ -1.68
CNGA1-203ENST00000420489 AP5M1Q9H0R1 490 aa4.59□□□□□ -1.68
CNGA1-203ENST00000420489 RHOBTB1O94844 696 aa4.58□□□□□ -1.68
CNGA1-203ENST00000420489 MMP3P08254 477 aa4.58□□□□□ -1.68
CNGA1-203ENST00000420489 HOXD12P35452 270 aa4.58□□□□□ -1.68
CNGA1-203ENST00000420489 EIF2S3P41091 472 aaKnown RBP4.58□□□□□ -1.68
CNGA1-203ENST00000420489 CTSWP56202 376 aa4.58□□□□□ -1.68
CNGA1-203ENST00000420489 RHBDL3P58872 404 aa4.58□□□□□ -1.68
CNGA1-203ENST00000420489 RIOX2Q8IUF8 465 aa4.58□□□□□ -1.68
CNGA1-203ENST00000420489 STAMQ92783 540 aa4.58□□□□□ -1.68
CNGA1-203ENST00000420489 DMRTB1Q96MA1 342 aa4.58□□□□□ -1.68
CNGA1-203ENST00000420489 FCRL3Q96P31 734 aaPredicted RBP4.58□□□□□ -1.68
CNGA1-203ENST00000420489 METTL22Q9BUU2 404 aaPredicted RBP4.58□□□□□ -1.68
CNGA1-203ENST00000420489 TMPRSS13Q9BYE2 586 aa4.58□□□□□ -1.68
CNGA1-203ENST00000420489 SPATC1LQ9H0A9 340 aa4.58□□□□□ -1.68
CNGA1-203ENST00000420489 GZF1Q9H116 711 aaPredicted RBP4.58□□□□□ -1.68
CNGA1-203ENST00000420489 LTB4R2Q9NPC1 389 aa4.58□□□□□ -1.68
CNGA1-203ENST00000420489 TCP11L1Q9NUJ3 509 aa4.58□□□□□ -1.68
CNGA1-203ENST00000420489 GNEQ9Y223 722 aaKnown RBP4.58□□□□□ -1.68
CNGA1-203ENST00000420489 HELZ2Q9BYK8 2649 aaKnown RBP4.58□□□□□ -1.68
CNGA1-203ENST00000420489 RPLP2P05387 115 aaKnown RBP4.58□□□□□ -1.68
CNGA1-203ENST00000420489 ESRRAP11474 423 aaPredicted RBP4.58□□□□□ -1.68
CNGA1-203ENST00000420489 NCLP19338 710 aaKnown RBP4.58□□□□□ -1.68
CNGA1-203ENST00000420489 KCNJ4P48050 445 aa4.58□□□□□ -1.68
CNGA1-203ENST00000420489 ASIC1P78348 528 aa4.58□□□□□ -1.68
CNGA1-203ENST00000420489 CAMK1Q14012 370 aa4.58□□□□□ -1.68
CNGA1-203ENST00000420489 CCDC27Q2M243 656 aa4.58□□□□□ -1.68
CNGA1-203ENST00000420489 ZBTB41Q5SVQ8 909 aa4.58□□□□□ -1.68
CNGA1-203ENST00000420489 TXNDC11Q6PKC3 985 aa4.58□□□□□ -1.68
CNGA1-203ENST00000420489 AGMOQ6ZNB7 445 aa4.58□□□□□ -1.68
CNGA1-203ENST00000420489 C15orf39Q6ZRI6 1047 aa4.58□□□□□ -1.68
CNGA1-203ENST00000420489 BEND4Q6ZU67 534 aa4.58□□□□□ -1.68
CNGA1-203ENST00000420489 MIGA2Q7L4E1 593 aa4.58□□□□□ -1.68
CNGA1-203ENST00000420489 RABEPKQ7Z6M1 372 aa4.58□□□□□ -1.68
CNGA1-203ENST00000420489 ZC3H18Q86VM9 953 aaKnown RBP4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms