RNA–Protein interactions for RNA: ENST00000373162.5

TRAPPC3-202, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-202ENST00000373162 CAPSQ13938 189 aa20.05■□□□□ 0.8
TRAPPC3-202ENST00000373162 KCNC3Q14003 757 aa20.05■□□□□ 0.8
TRAPPC3-202ENST00000373162 AMHR2Q16671 573 aa20.05■□□□□ 0.8
TRAPPC3-202ENST00000373162 TTC38Q5R3I4 469 aa20.05■□□□□ 0.8
TRAPPC3-202ENST00000373162 PTCRAQ6ISU1 281 aaPredicted RBP20.05■□□□□ 0.8
TRAPPC3-202ENST00000373162 KCNT2Q6UVM3 1135 aa20.05■□□□□ 0.8
TRAPPC3-202ENST00000373162 CATSPER4Q7RTX7 472 aa20.05■□□□□ 0.8
TRAPPC3-202ENST00000373162 MRPL10Q7Z7H8 261 aaKnown RBP20.05■□□□□ 0.8
TRAPPC3-202ENST00000373162 CATSPER3Q86XQ3 398 aa20.05■□□□□ 0.8
TRAPPC3-202ENST00000373162 HELQQ8TDG4 1101 aa20.05■□□□□ 0.8
TRAPPC3-202ENST00000373162 ASAP3Q8TDY4 903 aa20.05■□□□□ 0.8
TRAPPC3-202ENST00000373162 KHSRPQ92945 711 aaKnown RBP eCLIP20.05■□□□□ 0.8
TRAPPC3-202ENST00000373162 TBC1D32Q96NH3 1257 aa20.05■□□□□ 0.8
TRAPPC3-202ENST00000373162 POLR3CQ9BUI4 534 aaPredicted RBP20.05■□□□□ 0.8
TRAPPC3-202ENST00000373162 TUFT1Q9NNX1 390 aa20.05■□□□□ 0.8
TRAPPC3-202ENST00000373162 AAASQ9NRG9 546 aa20.05■□□□□ 0.8
TRAPPC3-202ENST00000373162 CLDND1Q9NY35 253 aa20.05■□□□□ 0.8
TRAPPC3-202ENST00000373162 B4GALT3O60512 393 aa20.04■□□□□ 0.8
TRAPPC3-202ENST00000373162 COL9A1P20849 921 aa20.04■□□□□ 0.8
TRAPPC3-202ENST00000373162 RAB27AP51159 221 aa20.04■□□□□ 0.8
TRAPPC3-202ENST00000373162 ZNF174Q15697 407 aa20.04■□□□□ 0.8
TRAPPC3-202ENST00000373162 PUS10Q3MIT2 529 aaKnown RBP20.04■□□□□ 0.8
TRAPPC3-202ENST00000373162 AGMOQ6ZNB7 445 aa20.04■□□□□ 0.8
TRAPPC3-202ENST00000373162 SLC39A11Q8N1S5 342 aa20.04■□□□□ 0.8
TRAPPC3-202ENST00000373162 EFHBQ8N7U6 833 aa20.04■□□□□ 0.8
TRAPPC3-202ENST00000373162 RNF149Q8NC42 400 aa20.04■□□□□ 0.8
TRAPPC3-202ENST00000373162 PIGOQ8TEQ8 1089 aa20.04■□□□□ 0.8
TRAPPC3-202ENST00000373162 MRPS27Q92552 414 aaKnown RBP20.04■□□□□ 0.8
TRAPPC3-202ENST00000373162 TMX3Q96JJ7 454 aa20.04■□□□□ 0.8
TRAPPC3-202ENST00000373162 NFKBIZQ9BYH8 718 aa20.04■□□□□ 0.8
TRAPPC3-202ENST00000373162 CLEC1BQ9P126 229 aa20.04■□□□□ 0.8
TRAPPC3-202ENST00000373162 DBR1Q9UK59 544 aaKnown RBP20.04■□□□□ 0.8
TRAPPC3-202ENST00000373162 A0A087WWV3 80 aa20.03■□□□□ 0.8
TRAPPC3-202ENST00000373162 ATP2B1P20020 1258 aa20.03■□□□□ 0.8
TRAPPC3-202ENST00000373162 GLRA2P23416 452 aa20.03■□□□□ 0.8
TRAPPC3-202ENST00000373162 RPA1P27694 616 aa20.03■□□□□ 0.8
TRAPPC3-202ENST00000373162 PBX3P40426 434 aa20.03■□□□□ 0.8
TRAPPC3-202ENST00000373162 FXR2P51116 673 aaKnown RBP eCLIP20.03■□□□□ 0.8
TRAPPC3-202ENST00000373162 NBR1Q14596 966 aa20.03■□□□□ 0.8
TRAPPC3-202ENST00000373162 TWF2Q6IBS0 349 aaKnown RBP20.03■□□□□ 0.8
TRAPPC3-202ENST00000373162 VN1R2Q8NFZ6 395 aa20.03■□□□□ 0.8
TRAPPC3-202ENST00000373162 LPPQ93052 612 aa20.03■□□□□ 0.8
TRAPPC3-202ENST00000373162 ZNF558Q96NG5 402 aa20.03■□□□□ 0.8
TRAPPC3-202ENST00000373162 TLR9Q9NR96 1032 aa20.03■□□□□ 0.8
TRAPPC3-202ENST00000373162 RAPGEFL1Q9UHV5 662 aa20.03■□□□□ 0.8
TRAPPC3-202ENST00000373162 INPPL1O15357 1258 aa20.02■□□□□ 0.8
TRAPPC3-202ENST00000373162 TSPAN1O60635 241 aa20.02■□□□□ 0.8
TRAPPC3-202ENST00000373162 OFD1O75665 1012 aa20.02■□□□□ 0.8
TRAPPC3-202ENST00000373162 EYA4O95677 639 aa20.02■□□□□ 0.8
TRAPPC3-202ENST00000373162 SRGAP2CP0DJJ0 459 aa20.02■□□□□ 0.8
TRAPPC3-202ENST00000373162 SKIP12755 728 aa20.02■□□□□ 0.8
TRAPPC3-202ENST00000373162 MBTD1Q05BQ5 628 aa20.02■□□□□ 0.8
TRAPPC3-202ENST00000373162 MXD4Q14582 209 aaPredicted RBP20.02■□□□□ 0.8
TRAPPC3-202ENST00000373162 PCBP1Q15365 356 aaKnown RBP eCLIP20.02■□□□□ 0.8
TRAPPC3-202ENST00000373162 THNSL1Q8IYQ7 743 aa20.02■□□□□ 0.8
TRAPPC3-202ENST00000373162 FAM184AQ8NB25 1140 aa20.02■□□□□ 0.8
TRAPPC3-202ENST00000373162 RNF169Q8NCN4 708 aa20.02■□□□□ 0.8
TRAPPC3-202ENST00000373162 MRPL9Q9BYD2 267 aaKnown RBP20.02■□□□□ 0.8
TRAPPC3-202ENST00000373162 C19orf67A6NJJ6 358 aa20.01■□□□□ 0.79
TRAPPC3-202ENST00000373162 MBTPS2O43462 519 aa20.01■□□□□ 0.79
TRAPPC3-202ENST00000373162 CSPG5O95196 566 aa20.01■□□□□ 0.79
TRAPPC3-202ENST00000373162 MUTP22033 750 aa20.01■□□□□ 0.79
TRAPPC3-202ENST00000373162 PPM1AP35813 382 aa20.01■□□□□ 0.79
TRAPPC3-202ENST00000373162 TECP42680 631 aa20.01■□□□□ 0.79
TRAPPC3-202ENST00000373162 ECM1Q16610 540 aa20.01■□□□□ 0.79
TRAPPC3-202ENST00000373162 DUSP6Q16828 381 aa20.01■□□□□ 0.79
TRAPPC3-202ENST00000373162 SPOUT1Q5T280 376 aaKnown RBP20.01■□□□□ 0.79
TRAPPC3-202ENST00000373162 PDE12Q6L8Q7 609 aaKnown RBP20.01■□□□□ 0.79
TRAPPC3-202ENST00000373162 POTEGQ6S5H5 508 aa20.01■□□□□ 0.79
TRAPPC3-202ENST00000373162 TMEM173Q86WV6 379 aaPredicted RBP20.01■□□□□ 0.79
TRAPPC3-202ENST00000373162 ABI1Q8IZP0 508 aa20.01■□□□□ 0.79
TRAPPC3-202ENST00000373162 IGSF22Q8N9C0 903 aa20.01■□□□□ 0.79
TRAPPC3-202ENST00000373162 SMG8Q8ND04 991 aaKnown RBP20.01■□□□□ 0.79
TRAPPC3-202ENST00000373162 TBC1D13Q9NVG8 400 aa20.01■□□□□ 0.79
TRAPPC3-202ENST00000373162 PCDHB6Q9Y5E3 794 aa20.01■□□□□ 0.79
TRAPPC3-202ENST00000373162 PCDHB2Q9Y5E7 798 aa20.01■□□□□ 0.79
TRAPPC3-202ENST00000373162 ST18O60284 1047 aa20■□□□□ 0.79
TRAPPC3-202ENST00000373162 NRIP1P48552 1158 aa20■□□□□ 0.79
TRAPPC3-202ENST00000373162 AFF1P51825 1210 aaKnown RBP20■□□□□ 0.79
TRAPPC3-202ENST00000373162 ZP2Q05996 745 aa20■□□□□ 0.79
TRAPPC3-202ENST00000373162 SMAD2Q15796 467 aaKnown RBP20■□□□□ 0.79
TRAPPC3-202ENST00000373162 CDCA2Q69YH5 1023 aaPredicted RBP20■□□□□ 0.79
TRAPPC3-202ENST00000373162 BCL7CQ8WUZ0 217 aaPredicted RBP20■□□□□ 0.79
TRAPPC3-202ENST00000373162 NRDE2Q9H7Z3 1164 aa20■□□□□ 0.79
TRAPPC3-202ENST00000373162 GPRC5CQ9NQ84 441 aa20■□□□□ 0.79
TRAPPC3-202ENST00000373162 EIF4ENIF1Q9NRA8 985 aaKnown RBP20■□□□□ 0.79
TRAPPC3-202ENST00000373162 SPG21Q9NZD8 308 aa20■□□□□ 0.79
TRAPPC3-202ENST00000373162 C5orf42Q9H799 3197 aa20■□□□□ 0.79
TRAPPC3-202ENST00000373162 USO1O60763 962 aaKnown RBP19.99■□□□□ 0.79
TRAPPC3-202ENST00000373162 NCLP19338 710 aaKnown RBP19.99■□□□□ 0.79
TRAPPC3-202ENST00000373162 BCAR1P56945 870 aa19.99■□□□□ 0.79
TRAPPC3-202ENST00000373162 RBM10P98175 930 aaKnown RBP19.99■□□□□ 0.79
TRAPPC3-202ENST00000373162 COASYQ13057 564 aa19.99■□□□□ 0.79
TRAPPC3-202ENST00000373162 SMAD4Q13485 552 aaKnown RBP19.99■□□□□ 0.79
TRAPPC3-202ENST00000373162 IL17AQ16552 155 aa19.99■□□□□ 0.79
TRAPPC3-202ENST00000373162 NOMO2Q5JPE7 1267 aa19.99■□□□□ 0.79
TRAPPC3-202ENST00000373162 TMEM184AQ6ZMB5 413 aa19.99■□□□□ 0.79
TRAPPC3-202ENST00000373162 SMRP1Q8NCR6 262 aa19.99■□□□□ 0.79
TRAPPC3-202ENST00000373162 CCDC51Q96ER9 411 aa19.99■□□□□ 0.79
TRAPPC3-202ENST00000373162 NACC1Q96RE7 527 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms