RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 PFKMP08237 780 aa7.25□□□□□ -1.25
RNU4-39P-201ENST00000362455 U2AF1L5P0DN76 240 aaPredicted RBP7.25□□□□□ -1.25
RNU4-39P-201ENST00000362455 NCAM1P13591 858 aa7.25□□□□□ -1.25
RNU4-39P-201ENST00000362455 MTHFD2P13995 350 aa7.25□□□□□ -1.25
RNU4-39P-201ENST00000362455 C5AR1P21730 350 aa7.25□□□□□ -1.25
RNU4-39P-201ENST00000362455 CYP2C19P33261 490 aa7.25□□□□□ -1.25
RNU4-39P-201ENST00000362455 MC3RP41968 323 aa7.25□□□□□ -1.25
RNU4-39P-201ENST00000362455 ECE1P42892 770 aa7.25□□□□□ -1.25
RNU4-39P-201ENST00000362455 U2AF1Q01081 240 aaKnown RBP eCLIP7.25□□□□□ -1.25
RNU4-39P-201ENST00000362455 NOLC1Q14978 699 aaKnown RBP eCLIP7.25□□□□□ -1.25
RNU4-39P-201ENST00000362455 GFOD2Q3B7J2 385 aa7.25□□□□□ -1.25
RNU4-39P-201ENST00000362455 LYSMD2Q8IV50 215 aa7.25□□□□□ -1.25
RNU4-39P-201ENST00000362455 DTX3Q8N9I9 347 aa7.25□□□□□ -1.25
RNU4-39P-201ENST00000362455 SLC2A13Q96QE2 648 aa7.25□□□□□ -1.25
RNU4-39P-201ENST00000362455 NUP88Q99567 741 aaPredicted RBP7.25□□□□□ -1.25
RNU4-39P-201ENST00000362455 RNF38Q9H0F5 515 aa7.25□□□□□ -1.25
RNU4-39P-201ENST00000362455 ABCC3O15438 1527 aa7.25□□□□□ -1.25
RNU4-39P-201ENST00000362455 ERVK-7P63135 1459 aa7.24□□□□□ -1.25
RNU4-39P-201ENST00000362455 EHBP1L1Q8N3D4 1523 aa7.24□□□□□ -1.25
RNU4-39P-201ENST00000362455 PCDH8O95206 1070 aa7.24□□□□□ -1.25
RNU4-39P-201ENST00000362455 PAPLNO95428 1278 aa7.24□□□□□ -1.25
RNU4-39P-201ENST00000362455 VCAM1P19320 739 aa7.24□□□□□ -1.25
RNU4-39P-201ENST00000362455 LGALS4P56470 323 aa7.24□□□□□ -1.25
RNU4-39P-201ENST00000362455 SRSF3P84103 164 aaKnown RBP7.24□□□□□ -1.25
RNU4-39P-201ENST00000362455 TRIM25Q14258 630 aaKnown RBP7.24□□□□□ -1.25
RNU4-39P-201ENST00000362455 SKIDA1Q1XH10 827 aa7.24□□□□□ -1.25
RNU4-39P-201ENST00000362455 MUM1Q2TAK8 710 aa7.24□□□□□ -1.25
RNU4-39P-201ENST00000362455 MPZL3Q6UWV2 235 aa7.24□□□□□ -1.25
RNU4-39P-201ENST00000362455 EPM2AIP1Q7L775 607 aaPredicted RBP7.24□□□□□ -1.25
RNU4-39P-201ENST00000362455 AUTS2Q8WXX7 1259 aa7.24□□□□□ -1.25
RNU4-39P-201ENST00000362455 RPGRQ92834 1020 aaKnown RBP7.24□□□□□ -1.25
RNU4-39P-201ENST00000362455 CLIP3Q96DZ5 547 aa7.24□□□□□ -1.25
RNU4-39P-201ENST00000362455 SYT3Q9BQG1 590 aa7.24□□□□□ -1.25
RNU4-39P-201ENST00000362455 DPP7Q9UHL4 492 aa7.24□□□□□ -1.25
RNU4-39P-201ENST00000362455 MYPNQ86TC9 1320 aa7.24□□□□□ -1.25
RNU4-39P-201ENST00000362455 ARHGAP23Q9P227 1491 aa7.24□□□□□ -1.25
RNU4-39P-201ENST00000362455 ADGBQ8N7X0 1667 aa7.23□□□□□ -1.25
RNU4-39P-201ENST00000362455 ZNF503-AS2A6NEH8 195 aa7.23□□□□□ -1.25
RNU4-39P-201ENST00000362455 VSTM5A8MXK1 200 aa7.23□□□□□ -1.25
RNU4-39P-201ENST00000362455 LPOP22079 712 aaPredicted RBP7.23□□□□□ -1.25
RNU4-39P-201ENST00000362455 IRAK1P51617 712 aa7.23□□□□□ -1.25
RNU4-39P-201ENST00000362455 NCKAP1LP55160 1127 aa7.23□□□□□ -1.25
RNU4-39P-201ENST00000362455 GTF2H3Q13889 308 aa7.23□□□□□ -1.25
RNU4-39P-201ENST00000362455 MINDY4Q4G0A6 757 aa7.23□□□□□ -1.25
RNU4-39P-201ENST00000362455 LIN37Q96GY3 246 aaPredicted RBP7.23□□□□□ -1.25
RNU4-39P-201ENST00000362455 LRGUKQ96M69 825 aa7.23□□□□□ -1.25
RNU4-39P-201ENST00000362455 AIFM3Q96NN9 605 aa7.23□□□□□ -1.25
RNU4-39P-201ENST00000362455 TMEM209Q96SK2 561 aa7.23□□□□□ -1.25
RNU4-39P-201ENST00000362455 BTBD2Q9BX70 525 aa7.23□□□□□ -1.25
RNU4-39P-201ENST00000362455 OR10A5Q9H207 317 aa7.23□□□□□ -1.25
RNU4-39P-201ENST00000362455 MTG2Q9H4K7 406 aa7.23□□□□□ -1.25
RNU4-39P-201ENST00000362455 ANLNQ9NQW6 1124 aa7.23□□□□□ -1.25
RNU4-39P-201ENST00000362455 DLL4Q9NR61 685 aa7.23□□□□□ -1.25
RNU4-39P-201ENST00000362455 DENND2AQ9ULE3 1009 aa7.23□□□□□ -1.25
RNU4-39P-201ENST00000362455 FAM135BQ49AJ0 1406 aa7.23□□□□□ -1.25
RNU4-39P-201ENST00000362455 IRS2Q9Y4H2 1338 aa7.23□□□□□ -1.25
RNU4-39P-201ENST00000362455 SCAF11Q99590 1463 aaKnown RBP7.23□□□□□ -1.25
RNU4-39P-201ENST00000362455 DEPDC5O75140 1603 aa7.23□□□□□ -1.25
RNU4-39P-201ENST00000362455 TMEM94Q12767 1356 aa7.22□□□□□ -1.25
RNU4-39P-201ENST00000362455 CAND2O75155 1236 aa7.22□□□□□ -1.25
RNU4-39P-201ENST00000362455 NDUFS2O75306 463 aa7.22□□□□□ -1.25
RNU4-39P-201ENST00000362455 CELA3BP08861 270 aa7.22□□□□□ -1.25
RNU4-39P-201ENST00000362455 CYP2C8P10632 490 aa7.22□□□□□ -1.25
RNU4-39P-201ENST00000362455 ATF2P15336 505 aa7.22□□□□□ -1.25
RNU4-39P-201ENST00000362455 APEX1P27695 318 aaKnown RBP7.22□□□□□ -1.25
RNU4-39P-201ENST00000362455 GLRBP48167 497 aa7.22□□□□□ -1.25
RNU4-39P-201ENST00000362455 SLC5A3P53794 718 aa7.22□□□□□ -1.25
RNU4-39P-201ENST00000362455 BCAR1P56945 870 aa7.22□□□□□ -1.25
RNU4-39P-201ENST00000362455 IDI1Q13907 227 aa7.22□□□□□ -1.25
RNU4-39P-201ENST00000362455 TARBP2Q15633 366 aaKnown RBP7.22□□□□□ -1.25
RNU4-39P-201ENST00000362455 RRP12Q5JTH9 1297 aaKnown RBP7.22□□□□□ -1.25
RNU4-39P-201ENST00000362455 PHF19Q5T6S3 580 aa7.22□□□□□ -1.25
RNU4-39P-201ENST00000362455 CCSAPQ6IQ19 270 aaPredicted RBP7.22□□□□□ -1.25
RNU4-39P-201ENST00000362455 LDHDQ86WU2 507 aa7.22□□□□□ -1.25
RNU4-39P-201ENST00000362455 SLC41A1Q8IVJ1 513 aa7.22□□□□□ -1.25
RNU4-39P-201ENST00000362455 SMARCC2Q8TAQ2 1214 aa7.22□□□□□ -1.25
RNU4-39P-201ENST00000362455 TSPEARQ8WU66 669 aa7.22□□□□□ -1.25
RNU4-39P-201ENST00000362455 FAM168AQ92567 244 aa7.22□□□□□ -1.25
RNU4-39P-201ENST00000362455 IFT122Q9HBG6 1241 aa7.22□□□□□ -1.25
RNU4-39P-201ENST00000362455 SIRT5Q9NXA8 310 aa7.22□□□□□ -1.25
RNU4-39P-201ENST00000362455 ARHGAP20Q9P2F6 1191 aa7.22□□□□□ -1.25
RNU4-39P-201ENST00000362455 PRSS50Q9UI38 385 aa7.22□□□□□ -1.25
RNU4-39P-201ENST00000362455 TUBD1Q9UJT1 453 aa7.22□□□□□ -1.25
RNU4-39P-201ENST00000362455 STRCP1A6NGW2 1772 aa7.22□□□□□ -1.25
RNU4-39P-201ENST00000362455 TMEM2Q9UHN6 1383 aa7.21□□□□□ -1.25
RNU4-39P-201ENST00000362455 MROH1Q8NDA8 1641 aa7.21□□□□□ -1.26
RNU4-39P-201ENST00000362455 OPHN1O60890 802 aa7.21□□□□□ -1.26
RNU4-39P-201ENST00000362455 IL18BPO95998 194 aa7.21□□□□□ -1.26
RNU4-39P-201ENST00000362455 ITGB5P18084 799 aa7.21□□□□□ -1.26
RNU4-39P-201ENST00000362455 ADKP55263 362 aaKnown RBP7.21□□□□□ -1.26
RNU4-39P-201ENST00000362455 IL13RA1P78552 427 aa7.21□□□□□ -1.26
RNU4-39P-201ENST00000362455 CDK17Q00537 523 aa7.21□□□□□ -1.26
RNU4-39P-201ENST00000362455 PPARAQ07869 468 aa7.21□□□□□ -1.26
RNU4-39P-201ENST00000362455 SPIDRQ14159 915 aa7.21□□□□□ -1.26
RNU4-39P-201ENST00000362455 MBNL2Q5VZF2 373 aaKnown RBP7.21□□□□□ -1.26
RNU4-39P-201ENST00000362455 B3GNT8Q7Z7M8 397 aa7.21□□□□□ -1.26
RNU4-39P-201ENST00000362455 MIER2Q8N344 545 aa7.21□□□□□ -1.26
RNU4-39P-201ENST00000362455 PPM1NQ8N819 430 aa7.21□□□□□ -1.26
RNU4-39P-201ENST00000362455 OR14C36Q8NHC7 312 aa7.21□□□□□ -1.26
RNU4-39P-201ENST00000362455 WDR48Q8TAF3 677 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms