RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 ECM1Q16610 540 aa19.02■□□□□ 0.64
BRCC3-202ENST00000340647 KCNT2Q6UVM3 1135 aa19.02■□□□□ 0.64
BRCC3-202ENST00000340647 AGMOQ6ZNB7 445 aa19.02■□□□□ 0.64
BRCC3-202ENST00000340647 TMEM173Q86WV6 379 aaPredicted RBP19.02■□□□□ 0.64
BRCC3-202ENST00000340647 NOSTRINQ8IVI9 506 aa19.02■□□□□ 0.64
BRCC3-202ENST00000340647 RNF169Q8NCN4 708 aa19.02■□□□□ 0.64
BRCC3-202ENST00000340647 PSPC1Q8WXF1 523 aaKnown RBP19.02■□□□□ 0.64
BRCC3-202ENST00000340647 IGFLR1Q9H665 355 aa19.02■□□□□ 0.64
BRCC3-202ENST00000340647 RNF216Q9NWF9 866 aaPredicted RBP19.02■□□□□ 0.64
BRCC3-202ENST00000340647 DACT1Q9NYF0 836 aa19.02■□□□□ 0.64
BRCC3-202ENST00000340647 PIN4Q9Y237 131 aaKnown RBP19.02■□□□□ 0.64
BRCC3-202ENST00000340647 PCDHB12Q9Y5F1 795 aa19.02■□□□□ 0.64
BRCC3-202ENST00000340647 TRIOO75962 3097 aa19.01■□□□□ 0.63
BRCC3-202ENST00000340647 OFD1O75665 1012 aa19.01■□□□□ 0.63
BRCC3-202ENST00000340647 GLRA2P23416 452 aa19.01■□□□□ 0.63
BRCC3-202ENST00000340647 TECP42680 631 aa19.01■□□□□ 0.63
BRCC3-202ENST00000340647 PTENP60484 403 aa19.01■□□□□ 0.63
BRCC3-202ENST00000340647 UBE3AQ05086 875 aa19.01■□□□□ 0.63
BRCC3-202ENST00000340647 KCNC3Q14003 757 aa19.01■□□□□ 0.63
BRCC3-202ENST00000340647 RABEP1Q15276 862 aa19.01■□□□□ 0.63
BRCC3-202ENST00000340647 AMHR2Q16671 573 aa19.01■□□□□ 0.63
BRCC3-202ENST00000340647 CATSPER4Q7RTX7 472 aa19.01■□□□□ 0.63
BRCC3-202ENST00000340647 SRGAP1Q7Z6B7 1085 aa19.01■□□□□ 0.63
BRCC3-202ENST00000340647 MRPL10Q7Z7H8 261 aaKnown RBP19.01■□□□□ 0.63
BRCC3-202ENST00000340647 IFNLR1Q8IU57 520 aaPredicted RBP19.01■□□□□ 0.63
BRCC3-202ENST00000340647 SLC39A11Q8N1S5 342 aa19.01■□□□□ 0.63
BRCC3-202ENST00000340647 LRRC43Q8N309 656 aa19.01■□□□□ 0.63
BRCC3-202ENST00000340647 RNF149Q8NC42 400 aa19.01■□□□□ 0.63
BRCC3-202ENST00000340647 MTRQ99707 1265 aa19.01■□□□□ 0.63
BRCC3-202ENST00000340647 INO80BQ9C086 356 aaPredicted RBP19.01■□□□□ 0.63
BRCC3-202ENST00000340647 ARIH1Q9Y4X5 557 aaPredicted RBP19.01■□□□□ 0.63
BRCC3-202ENST00000340647 TDRD15B5MCY1 1934 aaKnown RBP19.01■□□□□ 0.63
BRCC3-202ENST00000340647 PER2O15055 1255 aa19■□□□□ 0.63
BRCC3-202ENST00000340647 HOXA2O43364 376 aa19■□□□□ 0.63
BRCC3-202ENST00000340647 GAS2O43903 313 aaKnown RBP19■□□□□ 0.63
BRCC3-202ENST00000340647 LAG3P18627 525 aa19■□□□□ 0.63
BRCC3-202ENST00000340647 CAPSQ13938 189 aa19■□□□□ 0.63
BRCC3-202ENST00000340647 SAFBQ15424 915 aaKnown RBP eCLIP19■□□□□ 0.63
BRCC3-202ENST00000340647 IL17AQ16552 155 aa19■□□□□ 0.63
BRCC3-202ENST00000340647 TMEM31Q5JXX7 168 aa19■□□□□ 0.63
BRCC3-202ENST00000340647 TTC38Q5R3I4 469 aa19■□□□□ 0.63
BRCC3-202ENST00000340647 SPOUT1Q5T280 376 aaKnown RBP19■□□□□ 0.63
BRCC3-202ENST00000340647 TWF2Q6IBS0 349 aaKnown RBP19■□□□□ 0.63
BRCC3-202ENST00000340647 RBM23Q86U06 439 aaKnown RBP19■□□□□ 0.63
BRCC3-202ENST00000340647 EFHBQ8N7U6 833 aa19■□□□□ 0.63
BRCC3-202ENST00000340647 MRPS27Q92552 414 aaKnown RBP19■□□□□ 0.63
BRCC3-202ENST00000340647 TMX3Q96JJ7 454 aa19■□□□□ 0.63
BRCC3-202ENST00000340647 GPRC5CQ9NQ84 441 aa19■□□□□ 0.63
BRCC3-202ENST00000340647 TLR9Q9NR96 1032 aa19■□□□□ 0.63
BRCC3-202ENST00000340647 PCDHB2Q9Y5E7 798 aa19■□□□□ 0.63
BRCC3-202ENST00000340647 FAM86C2PA6NEL3 165 aa18.99■□□□□ 0.63
BRCC3-202ENST00000340647 NT5C1B-RDH14C9J2C7 533 aa18.99■□□□□ 0.63
BRCC3-202ENST00000340647 ASAP2O43150 1006 aa18.99■□□□□ 0.63
BRCC3-202ENST00000340647 MBTPS2O43462 519 aa18.99■□□□□ 0.63
BRCC3-202ENST00000340647 NCK2O43639 380 aa18.99■□□□□ 0.63
BRCC3-202ENST00000340647 TSPAN1O60635 241 aa18.99■□□□□ 0.63
BRCC3-202ENST00000340647 GPR37L1O60883 481 aa18.99■□□□□ 0.63
BRCC3-202ENST00000340647 OR52Z1P0C646 297 aa18.99■□□□□ 0.63
BRCC3-202ENST00000340647 XRCC6P12956 609 aaKnown RBP eCLIP18.99■□□□□ 0.63
BRCC3-202ENST00000340647 NRIP1P48552 1158 aa18.99■□□□□ 0.63
BRCC3-202ENST00000340647 CLUL1Q15846 466 aa18.99■□□□□ 0.63
BRCC3-202ENST00000340647 EP400NLQ6ZTU2 488 aa18.99■□□□□ 0.63
BRCC3-202ENST00000340647 EXOC8Q8IYI6 725 aa18.99■□□□□ 0.63
BRCC3-202ENST00000340647 THNSL1Q8IYQ7 743 aa18.99■□□□□ 0.63
BRCC3-202ENST00000340647 SMG8Q8ND04 991 aaKnown RBP18.99■□□□□ 0.63
BRCC3-202ENST00000340647 BCL7CQ8WUZ0 217 aaPredicted RBP18.99■□□□□ 0.63
BRCC3-202ENST00000340647 TCP11Q8WWU5 503 aa18.99■□□□□ 0.63
BRCC3-202ENST00000340647 POLR3CQ9BUI4 534 aaPredicted RBP18.99■□□□□ 0.63
BRCC3-202ENST00000340647 NRDE2Q9H7Z3 1164 aa18.99■□□□□ 0.63
BRCC3-202ENST00000340647 AAASQ9NRG9 546 aa18.99■□□□□ 0.63
BRCC3-202ENST00000340647 TBC1D13Q9NVG8 400 aa18.99■□□□□ 0.63
BRCC3-202ENST00000340647 LZTS1Q9Y250 596 aa18.99■□□□□ 0.63
BRCC3-202ENST00000340647 PCDHB6Q9Y5E3 794 aa18.99■□□□□ 0.63
BRCC3-202ENST00000340647 HIDE1A8MVS5 230 aa18.98■□□□□ 0.63
BRCC3-202ENST00000340647 DGAT1O75907 488 aa18.98■□□□□ 0.63
BRCC3-202ENST00000340647 BCAR1P56945 870 aa18.98■□□□□ 0.63
BRCC3-202ENST00000340647 MBTD1Q05BQ5 628 aa18.98■□□□□ 0.63
BRCC3-202ENST00000340647 POU5F1BQ06416 359 aa18.98■□□□□ 0.63
BRCC3-202ENST00000340647 ORC2Q13416 577 aaPredicted RBP18.98■□□□□ 0.63
BRCC3-202ENST00000340647 POTEGQ6S5H5 508 aa18.98■□□□□ 0.63
BRCC3-202ENST00000340647 ZNF558Q96NG5 402 aa18.98■□□□□ 0.63
BRCC3-202ENST00000340647 TBC1D32Q96NH3 1257 aa18.98■□□□□ 0.63
BRCC3-202ENST00000340647 VN1R3Q9BXE9 311 aa18.98■□□□□ 0.63
BRCC3-202ENST00000340647 EIF2AQ9BY44 585 aaKnown RBP18.98■□□□□ 0.63
BRCC3-202ENST00000340647 RNF39Q9H2S5 420 aa18.98■□□□□ 0.63
BRCC3-202ENST00000340647 TUFT1Q9NNX1 390 aa18.98■□□□□ 0.63
BRCC3-202ENST00000340647 TRIP11Q15643 1979 aa18.98■□□□□ 0.63
BRCC3-202ENST00000340647 C19orf67A6NJJ6 358 aa18.97■□□□□ 0.63
BRCC3-202ENST00000340647 PI4K2BG5E9Z4 385 aa18.97■□□□□ 0.63
BRCC3-202ENST00000340647 DDHD2O94830 711 aa18.97■□□□□ 0.63
BRCC3-202ENST00000340647 EYA4O95677 639 aa18.97■□□□□ 0.63
BRCC3-202ENST00000340647 RPA1P27694 616 aa18.97■□□□□ 0.63
BRCC3-202ENST00000340647 TRAPPC10P48553 1259 aa18.97■□□□□ 0.63
BRCC3-202ENST00000340647 ZP2Q05996 745 aa18.97■□□□□ 0.63
BRCC3-202ENST00000340647 SMAD2Q15796 467 aaKnown RBP18.97■□□□□ 0.63
BRCC3-202ENST00000340647 DUSP6Q16828 381 aa18.97■□□□□ 0.63
BRCC3-202ENST00000340647 CSPP1Q1MSJ5 1256 aa18.97■□□□□ 0.63
BRCC3-202ENST00000340647 ZNF280BQ86YH2 543 aa18.97■□□□□ 0.63
BRCC3-202ENST00000340647 ABI1Q8IZP0 508 aa18.97■□□□□ 0.63
BRCC3-202ENST00000340647 FAM184AQ8NB25 1140 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms